Gene Details:

• Gene ID: mrna02558.1-v1.0-hybrid
• Gene Family: C2H2 family
• Description: C2H2 family protein
• Species: Fragaria vesca
• Source: C2H2 family gene from PlantTFDB

Protein Features:

• Pfam:  PF10248
• SuperFamily:  SSF103025
• TIGRFAMs:  TIGR03317
• Gene3D:  G3DSA:3.40.50.1010
• SuperFamily:  SSF57667
• PROSITE profile:  PS50157
• Gene3D:  G3DSA:3.30.160.60
• PROSITE pattern:  PS00028
• Pfam:  PF01936
• InterPro:  IPR019376    IPR017703    IPR029060    IPR007087    IPR013087    IPR021139

Annotation Proteins:

• Refseq:  XP_004290960.1  — PREDICTED: zinc finger protein ZAT10
• Swissprot:  Q96289  — ZAT10_ARATH; Zinc finger protein ZAT10
• TrEMBL:  A0A2P6Q0V6  — A0A2P6Q0V6_ROSCH; Putative transcription factor C2H2 family
• STRING:  XP_004290960.1  — (Fragaria vesca)

Gene Ontology:

• GO:0006979  — Biological Process — response to oxidative stress
• GO:0009409  — Biological Process — response to cold
• GO:0009414  — Biological Process — response to water deprivation
• GO:0009611  — Biological Process — response to wounding
• GO:0009644  — Biological Process — response to high light intensity
• GO:0009651  — Biological Process — response to salt stress
• GO:0009737  — Biological Process — response to abscisic acid
• GO:0010117  — Biological Process — photoprotection
• GO:0010200  — Biological Process — response to chitin
• GO:0015979  — Biological Process — photosynthesis
• GO:0035264  — Biological Process — multicellular organism growth
• GO:0045892  — Biological Process — negative regulation of transcription, DNA-templated
• GO:0005634  — Cellular Component — nucleus
• GO:0043565  — Molecular Function — sequence-specific DNA binding
• GO:0046872  — Molecular Function — metal ion binding

Family Introduction:

• Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.

Literature:

• AtZFP1, encoding Arabidopsis thaliana C2H2 zinc-finger protein 1, is expressed downstream of photomorphogenic activation.   DOI:  10.1023/a:1006352809700 ;  PMID:  10794528

Sequences: