Information report for mrna00904.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_004297791.1 — PREDICTED: protein indeterminate-domain 5, chloroplastic
- Swissprot: Q9ZUL3 — IDD5_ARATH; Protein indeterminate-domain 5, chloroplastic
- TrEMBL: A0A2P6R4H0 — A0A2P6R4H0_ROSCH; Putative transcription factor C2H2 family
- STRING: XP_004297791.1 — (Fragaria vesca)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >mrna00904.1-v1.0-hybrid|Fragaria_vesca|C2H2|mrna00904.1-v1.0-hybrid
ATGGCTGCATCTTCTTCTTCACTTTTCGGAATTAGAGAAGAAGATCAAAACCTGATGAAGCAACAGCAGCATTCCAGCTCCACACCAACATCATCCACAGCCACCGCGCCTCCAGCACCACCACCGCAGAATAAGAAGAAGAGAAACCAACCTGGAACACCAAGCAAGTTCATCTGTGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAGAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTAAAGCAGAAGACTACAAAAGAACCCAAACGCAAGGTCTACCTGTGCCCCGAGCCCACCTGCGTCCACCACGACCCGTCTCGCGCCCTCGGCGACCTCACCGGAATCAAGAAACACTTCTTCAGAAAACACGGCGAGAAGAAGTGGAAATGCGAGAAGTGCTCCAAGCGCTACGCCGTTCAGTCCGATTGGAAGGCTCATTCTAAGACTTGCGGCACTCGGGAGTACCGCTGCGACTGTGGTACTCTCTTCTCCAGGAGAGACAGTTTTATCACTCATAGGGCATTCTGTGATGCACTGGCTCAGGAAAGTGCAAGACATCAACCCAATCTGAGCAGCCTTGGAAGCAACTTATATGGAGGTACCAGCAACACTGGCCTAGCCTTATCTCATCACCACCATCAGCAGGTTGTGGGCCCTAATATTGATCATCATCACCACAACAATCACTCAGCGGCTGCCGACATCTTACGTCTCGGCGGCGGCGGCGGCAATGCCCGGACCGGACAGTTCGATCATCTCCTTTCTCCACCTTCAATGGGATCGTCGTTTCGTCCGCCGCAGTCTTCGGGAACCTTTTTCATGAATCAAGACCAGCCTAGCCAGCAATACCATCACGATCAAGAACAGCTGCAAAGCAAACAATTCCATGGACTGATGCAATTTTCTGATCATCAGAATAACAGCAACAACTCTTCTTCAGGAGGCAATCTGTTTAACCTACCTTTCTTATCAAACAGCAGCAATAGCAACAATGCCACTGGCGCCAGCAATACTAATCTACTAGTTCATCCTGAGCACCAATACAACAGTAATGGCAGTGGAGCTGGCGGCGAAGGCGGGTCGAGTCTTTTCTCTAGTCACATGATCGGCGGAGGCGGTGGTGATCACATCAGCTCCGGCAATGTGAGTTCACTCTATAGTTCTCAAGTACAAAACAACCATCATGGTGTCTCGCACATGTCCGCCACCGCGCTGCTTCAGAAGGCGGCTCAAATGGGGTCAACTACTTCGAGCAACAACACTTCTGCCTCGCTCCTAAGAAGCTTTGGAAGCACATCCTCCACTAAATCTGAACGCCCCGCCACGGCGGCCTCCCTAGTTCCCGCCAATTTAGGCGGCATTTTCGGTGGCAGCAGTGAAAATGAGAACAGCCTCCAGGACCTGATGAACTCTTTTGCTGCTGGAGGAGGGAGCTCCTCCATGTTCGGAGGCGGGTCTGATAGGTTGACTAGGGATTTTCTCGGGGTTGGTCAGATTGTTAGGAGCATGAGCGGTGGGCAACAACAAACTCAGATCGAGCATATGAGCTCCTTGGATTCAGAGAGCAATGCTGCGCCGTCAACCCAATCTTTTGGAGGAGGTGGGAATTTTCATGTGGAGGCAGTCATGAGTCATGACCTGGAGTACACATTTCGGGCCGGGAAATATGTGGCTTGTTTCAATGGAAGCCGGTTTGTCCGAAAGTTTATCTTACGCATCAAGTTCTGGATTAATTTGAGTGTCATGAAGGGAATGATGCGAGGTTCTCGTGAGCATAGCGGTGGCGACCCGACCCGACGGAGAATCCGACTGCATCAGGACGTTTTTGGTGTCGAGTTCTCAGCGAAAAGAGACGGGGTAGAACAAACCGGGGTCCAGGCTTCCCAAGGAGGTTGCTTTTCAAAGAACCAGGAAGAGGTCTCCTGTGGTTCAGCGGCAGCACTTGTAGAAGATATGGGGTCGTGGCTGGGTAGGCCGCTAGACTGA
Protein Sequence:
- >mrna00904.1-v1.0-hybrid|Fragaria_vesca|C2H2|mrna00904.1-v1.0-hybrid
MAASSSSLFGIREEDQNLMKQQQHSSSTPTSSTATAPPAPPPQNKKKRNQPGTPSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHQPNLSSLGSNLYGGTSNTGLALSHHHHQQVVGPNIDHHHHNNHSAAADILRLGGGGGNARTGQFDHLLSPPSMGSSFRPPQSSGTFFMNQDQPSQQYHHDQEQLQSKQFHGLMQFSDHQNNSNNSSSGGNLFNLPFLSNSSNSNNATGASNTNLLVHPEHQYNSNGSGAGGEGGSSLFSSHMIGGGGGDHISSGNVSSLYSSQVQNNHHGVSHMSATALLQKAAQMGSTTSSNNTSASLLRSFGSTSSTKSERPATAASLVPANLGGIFGGSSENENSLQDLMNSFAAGGGSSSMFGGGSDRLTRDFLGVGQIVRSMSGGQQQTQIEHMSSLDSESNAAPSTQSFGGGGNFHVEAVMSHDLEYTFRAGKYVACFNGSRFVRKFILRIKFWINLSVMKGMMRGSREHSGGDPTRRRIRLHQDVFGVEFSAKRDGVEQTGVQASQGGCFSKNQEEVSCGSAAALVEDMGSWLGRPLD*