Information report for MELO3C022568P1
Gene Details
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Functional Annotation
- Refseq: XP_008460216.1 — PREDICTED: protein indeterminate-domain 5, chloroplastic
- Swissprot: Q9ZUL3 — IDD5_ARATH; Protein indeterminate-domain 5, chloroplastic
- TrEMBL: A0A1S3CCG7 — A0A1S3CCG7_CUCME; protein indeterminate-domain 5, chloroplastic
- STRING: XP_008460216.1 — (Cucumis melo)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Citrullus lanatus: Cla016926
- Cucumis sativus: Cucsa.277240.2, Cucsa.277240.1
- Malus domestica: MDP0000126615, MDP0000158195
- Populus trichocarpa: Potri.010G099200.6, Potri.010G099200.5, Potri.010G099200.4, Potri.010G099200.3, Potri.010G099200.2, Potri.010G099200.1, Potri.008G142400.5, Potri.008G142400.4, Potri.008G142400.3, Potri.008G142400.2, Potri.008G142400.1
- Prunus mume: XP_016648019.1, XP_008220979.1
- Prunus persica: Prupe.1G341000.2.p, Prupe.1G341000.1.p
- Pyrus bretschneideri: Pbr012192.1
- Ziziphus jujuba: XP_015894326.1
Sequences
CDS Sequence:
- >MELO3C022568P1|Cucumis_melo|C2H2|MELO3C022568P1
ATGGCTGCATCTTCTTCCTCAGTTCCACTTTTTGGAGTTCGAGAAGAAGGTCAGATGAGAGGTCAGCAGCCACCGCAACCACAACCGCCGCCGCCGTCAGCTCCCTCTAATTCATCCACTGCTCTTCCAACTCCTCCTCCCCAGAAGAAAAAGAGAAACCAACCAGGAACTCCAAATCCAGATGCAGAAGTGATAGCGTTAAGTCCAAAGACATTAATGGCAACAAACAGATTCATATGTGAAGTATGCAACAAAGGGTTTCAAAGAGAGCAAAATCTACAACTACATAGAAGAGGACATAATTTACCATGGAAATTAAAGCAGAAAAGCACAAAAGAACCAAAAAGAAAAGTGTATTTATGCCCAGAACCAACATGCGTTCACCATGACCCGTCAAGAGCACTTGGGGATTTAACAGGTATCAAGAAACACTACTCACGAAAGCACGGAGAAAAGAAGTGGAAGTGCGATAAATGCTCTAAACGTTACGCCGTTCAATCCGACTGGAAAGCACATTCCAAAACCTGTGGCACTAGAGAATATCGTTGCGATTGTGGCACTCTCTTCTCCAGAAGGGACAGTTTCATTACACATAGAGCGTTTTGTGATGCATTGGCACAAGAAAGTGCAAGACACCCTCCAAATTTGGGGACAGCCATTGGAAGCCATTTATATGGAGGTAATAGCAATGTGGGTTTGACGTTATCACAAGTCCCTCAACTCTCTTCTCTTCAAGACCATTCCAACATCACCCAATCACCGCACGACGTCCTTCGTCTTGGCGGCGGTCGAACCGGGCAATTCACTCATCTCCTCCCTCCTTCTATTGGCTCTTCCTTCCGACCCCCACCGCAACAAGCAATGCCATCATCCAATGCGGCCTTCTTCGGCCTGTCGGACCAAACTAACCAAAATAGCTTCCATGAAGATCATCATCAAAGCCAATCCCAGCAAGGGTTGTTCGGAAACAAGCCTTTTCATGGGCTAATGCAATTCCCTTCTGATATCCAAACCCATGCAAATAACAACAGCAATTCTGCTTCAAATCTCTTCAATTTGAGCTTCATTTCAAATCCCACTGGTGATAATACTTCCAATATGAACAATAACAATGACACCAACACTAACAATAGCAACAGCAGTAGCAACAACAACAACAATCTTCCATCCTCTTTGTTAAACCAATTCAACGGAACGAACAATGGCAACAACGACGGTCCTGCGTCTAACATTTTTGCTGTTAACATAATGGGAGATCAAATCAATTCAGCTGCAGTCCCCTCGCTCTACAGCAACACCGCCCCGGGAGGATGTAGTAGCGGTACAAGCGGAGGAGGAGCAATCCCACATATGTCCGCAACAGCACTGCTACAAAAAGCAGCACAATTAGGCTCAACAACGTCAAGTAGCAATACTACAGCGACATTGCTACGCACATTTGGAAGCTCCTCGACCTCAAGCGGAAAGGCATCAGATAGAACGCTCTTCCCACCAAGTTATGGCGGAGTAGTATTCAGTGAAAACGAGAGTAATCTCCAAGACCTGATGAACTCATTCGCAAACGCGAGCTCAGGGAGCGGGATGTTCGGGTCGTTTGGGGTGGAAAGCTTAGAGGATCCAACGAAGTTACAACAGAATTTAAGCACAGTGAGTATGGGAGGTGGGACAGATAGGTTAACAAGAGACTTCTTAGGGGTGGGACAAATCGTAAGAAGTATGAGCGGAGGTGGTGGCGGTGGCGGTTATTCACAGAGAGAACACAAACAAGGGGGGCAAGGGATAGTTATGGAGGGTAATGAGAGCAATACGGCGCCGTCAAGCAATGCGTTTGGTGGTGGAAATGGAAACTACCAGTGA
Protein Sequence:
- >MELO3C022568P1|Cucumis_melo|C2H2|MELO3C022568P1
MAASSSSVPLFGVREEGQMRGQQPPQPQPPPPSAPSNSSTALPTPPPQKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPPNLGTAIGSHLYGGNSNVGLTLSQVPQLSSLQDHSNITQSPHDVLRLGGGRTGQFTHLLPPSIGSSFRPPPQQAMPSSNAAFFGLSDQTNQNSFHEDHHQSQSQQGLFGNKPFHGLMQFPSDIQTHANNNSNSASNLFNLSFISNPTGDNTSNMNNNNDTNTNNSNSSSNNNNNLPSSLLNQFNGTNNGNNDGPASNIFAVNIMGDQINSAAVPSLYSNTAPGGCSSGTSGGGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRTFGSSSTSSGKASDRTLFPPSYGGVVFSENESNLQDLMNSFANASSGSGMFGSFGVESLEDPTKLQQNLSTVSMGGGTDRLTRDFLGVGQIVRSMSGGGGGGGYSQREHKQGGQGIVMEGNESNTAPSSNAFGGGNGNYQ*