Information report for MDP0000314572
Gene Details
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Functional Annotation
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn171491, Achn094071
- Fragaria vesca: mrna16285.1-v1.0-hybrid
- Juglans regia: WALNUT_00022548-RA, WALNUT_00002566-RA
- Manihot esculenta: Manes.12G133700.1.p
- Nicotiana benthamiana: Niben101Scf00052g04001.1
- Populus trichocarpa: Potri.007G094100.1
- Prunus mume: XP_016647116.1, XP_008234097.1
- Prunus persica: Prupe.6G188400.1.p
- Pyrus bretschneideri: Pbr012970.1
- Sesamum indicum: XP_011097563.1
- Solanum melongena: Sme2.5_01344.1_g00002.1
- Vitis vinifera: GSVIVT01004847001
- Ziziphus jujuba: XP_015890861.1, XP_015890628.1
Sequences
CDS Sequence:
- >MDP0000314572|Malus_domestica|C2H2|MDP0000314572
ATGGAAATCAGTCTATCTCTAGAAAGTGTTCGGCAAAGCCCATTRCATCGCAAGAAATCCAGAAGGCTTTTGGGTCTCACAATGTCCAGTCTCAAGGGAATGAATGTTATATGGAATGAATTGTGTACGGATTTGGAAGATGTCTATTCGCCCCATGATGAYGTCTTTGTTGTCAAAATACAAATAAGCCGCATCCTAATCGAAAATGGCTCAAGAGTTAGTGTATTMTTCAAGGRTACCGTTGAAAAGATGAGGATTGTTGACACCGTTGAAAAGGGGAAAATGACCCTTCACACCTTCAATGGARCCCCAGCTCGATTTTTGGGAACGATAAAACTGGCGATCCAAGTTATACCATTTGTACTTAATGCAGTGGCAATAAACCAACGACTTGTCAACCGAATCYTTAAAAAAAATATCAAAAGCACGGTGGAAGTTTACGTGGATGACATGGTTGTCAAAAGCAAGGAGAAGAAGGATAACATAATACACATCCAAGAGTCATTTGGTCTACTCCAGAAGTACAAAATGAAGCTAAACTCCGAAAAGTGCACATCYGGAGTAGCATCGAGCAAGTTCTTAAGATGTCTAGTTATCAAGTGTGGAATTGAGGCCAACCTAGATCAAAACAAGTGCAAGTTGTTTTTTATGGCTATAAAAAAGAACAAGCACTTGGTCTGGATTGATGAATGCGAAGAASCATTCGCAAAGCTCAAGGAATGCCTCTCTAAACCCTTATTGATGTCCAAACCGRTCAATAGARAGGACTTGTGCCTRTACATGGTCGTGTTTGACTGTACAGCAAGCAACAACGAAGCGGAGTACGAAGCACTCTTGGCAAGACTTAAAGTCGCGGAAGAGCTCCAAGGGGATATGATTCTTTTCTTAATGAAAACACCAATTGTTGGAACTAAATTCATGCACCACCATAGACGGCGRAGATGCACAAGTYCGACTACATATAAGAAAGCAAACAATCGAAGTCAAACATGGGGTATCAGTAAGCTCTCTGATAATCAAGTTAGTAAGCAATATAAAGATTCAAGCAATCGGTGGAATCATCGACCACCATGTCYTTGGAACTTGGAAGTGTCGCTCAAAACTGATTGTGATTGTGTCCGCACTATGTCGTTTCCGCGTCAACCTTTTCATACTCCGCTGGAGAGCTCCGTCGAGTCTTTGAATGAGGACACCGACCCGGTAATCCCGCTCCGGAATCTCTCGATGGTCCGAACAAGAATGGATTCCCTGCAGTACTTCCTCACCGATTCAATCCACGCCAACGCTCTAGTCAGCAAGGACCAGATGGATATGGTATCCGCCGGCATCGCCTCCGCCATCCACGAAATCATCTCAAACGGCGCCGCTCTGTTGGCTCTCTCTCAGAACCCGATACCCTCATCCGACCGGACCCGAACACCTGCCGCTCAAATCGAGGTTCCCGAGGTCAGGAAAGAGGTAAAAGAGAACAATAGCGGTAAGGATGACGCAGACGGTGGTGAGATCGTGGAGGTGGACGCGATGGAGCTGCTGGCGGAGCACATCCATTACTGCGAGATTTGCGGGAAGGGGTTCAAGCGAGACGCGAATTTGAGAATGCACATGCGGGCTCACGGGAACCGGTTCAAGACCCCCGAGGCGTTGGCCAAACCGGATAAGACCCCGGCCCAGTCGAGCCGGAATTCCCGGTTCTCGTGCCCGTACGTCGGGTGCAACCGGAACAAGGAGCACGGGAAGTTCCGGCCGTTAAAATCGGTGATTTGCGTGAAGAATCACTTCAAGAGGAGCCACTGCCCAAAAATGTACTCGTGTAACAGGTGCAATAAGAAAAGCTTCTCGGTGGTGGCGGATTTGAAGAGCCACTTGAAGCATTGTGGCGAGGCTAGGTGGCGGTGCACGTGTGGCACGAGCTTCTCGAGGAAGAGCAAGCTGTTCGGACACATGGCGTTGTTCGAAGGGCACATGCCGGCGGTTGAGGACGAGAAGAGTGGTGGTGAGAGTAAGGTTGTGACAGCTATGGAGCAGGATGATGATGATGAGGAGGAAGAAGAGGAGGAGGAGGGCATGACGACGTCGTCGAAGGGAACGGAGTTGAATCCGAGTTCCAATATTTACAAGGATATTGAGTTTTCTGATGAATTGCTTAGTGGGCTCGGCTCGATAGATGACTATTTTTTGGAGGATATGTTGACTGATTTGTAG
Protein Sequence:
- >MDP0000314572|Malus_domestica|C2H2|MDP0000314572
MEISLSLESVRQSPLHRKKSRRLLGLTMSSLKGMNVIWNELCTDLEDVYSPHDDVFVVKIQISRILIENGSRVSVXFKXTVEKMRIVDTVEKGKMTLHTFNGXPARFLGTIKLAIQVIPFVLNAVAINQRLVNRIXKKNIKSTVEVYVDDMVVKSKEKKDNIIHIQESFGLLQKYKMKLNSEKCTSGVASSKFLRCLVIKCGIEANLDQNKCKLFFMAIKKNKHLVWIDECEEXFAKLKECLSKPLLMSKPXNRXDLCLYMVVFDCTASNNEAEYEALLARLKVAEELQGDMILFLMKTPIVGTKFMHHHRRRRCTSXTTYKKANNRSQTWGISKLSDNQVSKQYKDSSNRWNHRPPCXWNLEVSLKTDCDCVRTMSFPRQPFHTPLESSVESLNEDTDPVIPLRNLSMVRTRMDSLQYFLTDSIHANALVSKDQMDMVSAGIASAIHEIISNGAALLALSQNPIPSSDRTRTPAAQIEVPEVRKEVKENNSGKDDADGGEIVEVDAMELLAEHIHYCEICGKGFKRDANLRMHMRAHGNRFKTPEALAKPDKTPAQSSRNSRFSCPYVGCNRNKEHGKFRPLKSVICVKNHFKRSHCPKMYSCNRCNKKSFSVVADLKSHLKHCGEARWRCTCGTSFSRKSKLFGHMALFEGHMPAVEDEKSGGESKVVTAMEQDDDDEEEEEEEEGMTTSSKGTELNPSSNIYKDIEFSDELLSGLGSIDDYFLEDMLTDL