Information report for MDP0000295064
Gene Details
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Functional Annotation
- Refseq: XP_028955214.1 — outer envelope protein 80, chloroplastic-like isoform X1
- Swissprot: Q9C5J8 — OEP80_ARATH; Outer envelope protein 80, chloroplastic
- TrEMBL: A0A498K9D8 — A0A498K9D8_MALDO; Uncharacterized protein
- STRING: XP_009374482.1 — (Pyrus x bretschneideri)
- GO:0009658 — Biological Process — chloroplast organization
- GO:0005739 — Cellular Component — mitochondrion
- GO:0009941 — Cellular Component — chloroplast envelope
- GO:0019867 — Cellular Component — outer membrane
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Glycine max: Glyma.15G033600.1.p
- Juglans regia: WALNUT_00021261-RA, WALNUT_00013187-RA
- Manihot esculenta: Manes.09G029400.1.p
- Populus trichocarpa: Potri.003G205000.1
- Prunus mume: XP_008219758.1
- Prunus persica: Prupe.6G023800.1.p
- Pyrus bretschneideri: Pbr000606.1, Pbr023221.1, Pbr019090.1
- Ricinus communis: 30169.m006417
- Sesamum indicum: XP_011080270.1
- Vitis vinifera: GSVIVT01025301001, GSVIVT01033329001
- Ziziphus jujuba: XP_015875985.1
Sequences
CDS Sequence:
- >MDP0000295064|Malus_domestica|C2H2|MDP0000295064
ATGCCGCCGAACGACGACGTTCGGTTCACTTCGTCTCCTTCCGCCAAAGTCCCTCGCTCTCCCGAAAATCGACACGTGGACCTTACAGTTCTGTTCGCCAGGACCAGAAACTCGTTCTCCCAACTCATCGACTCGCTTAGGATTCGTTCTTCTTTCCCAAAGTTCCCTCCTTTGCCCATCCTCTGCTCCGCTTCGCTATCGCTGACTAGGCACGCCGACTCAGCAGAGTCCGAGTGGCGAAATCGGAATGCGGACCGGGGCCGTTTCGTAGGGAAGTCGCCTCTTTTATGCTCGGCGTCGCTGGCTCTGACTCGGCCGGACGAGTCGACTCAGTCGCAGCAGAAGGGACACGCTTCCAGTCGGCACGATGAGGAGAGGGTTTTGATAAGCGAGGTGCTGGTGAGGAACAAGGACGGGGAGGAGCTGGAAAGGAAGGACCTTGAAATGGAGGCGTTGGCGGCTCTCAAGGCGTGCCGAGCGAACTCGGCGCTCACTGTGCGGGAGGTCCAGGAGGACGTGCATAGGATCATCGATAGTGGCTATTTCTGCTCCTGCATGCCGGTCGCCGTCGATACAAGGGACGGCATCAGATTGATCTTTCAGGTAAAACCAAACCAGGAATTCCAAGGGCTAGTATGTGAAGGGGCAAATGTTCTTCCAGCAAAGTTTCTGAAGGATGCATTCTGTGATGGATATGGAAAAGTTATTAATCTTAAGCGTTTGAATGAAGTAATATCTTCCATCAATGATTGGTACATGGATCGGGGCCTTTTTGCCATGGTTTCAGCTGTTGAGATTCTCTCAGGTGGTATTCTTAAGTTACAAGTATCAGAAACTGAGGTGAATAATATCTCCATGCGATTCCTTGACAGGAAGACGGGTGAACCAACCATAGGGAAGACAAAGCCCGAMACGATACTTCGCCAACTTACTACTAAGAAGGGCCAGGTCTACAGTATGTTACAGGGAAAAAGAGATGTAGAGACTGTATTGACTATGGGACTTATGGAAGATGTTAGCATCATACCCCAACCAGCAGATGCTGGTAAGGTTGATATCACAATGAATGTTGTTGAGCGGCCAAGTGGAGGGTTTTCTGCTGGTGGTGGTATATCAAGTGGAATTACAAGCGGCCCTCTGTCAGGACTCATTGGAAGCTTTGCATATTCTCATAGGAATCTCTTCGGAAGAAACCAAAAGCTACACGTTTCCTTAGAGAGGGGCCAGATAGACTCGATTTTTCGCATAAATTACTCAGATCCATGGATTGCAGGAGATGATAAGCGGACATCCAGGACCATAATGGTTCAGAATTCAACAACCCCCGGAACACTTATCCATGGTAACCAACTAAATGGTAGCAACTTGACCATTGGTCGYGTCACAGCGGGTATTGAATTTAGCCGACCAATAAGACCAAAGTTTAGTGGAACAGCTGGGCTTATCTTTCAGCATGCTGGTGCTCGTGACGAGAAAGGAGATCCTATTATCAAGGATGTCTACAGCAGCCCTCTAACTGCWAGTGGCAATACTCATGATGATATGCTCCTTGCTAAACTTGAGAGTGTCTACACGGGTTCTGGTGACCATGGGTCGTCAATGTGTGTTTTCAACGTGGAACAAGGACTTCCTGTTTTGCCTGAATGGTTGTATTTCAACAGAATAAATGCTCGCGCCAGGAAAGACGTAGAACTTGGTCCTACTCGTGTTCTTGTAAGGTACGACCATTCTGTATTTGTCACAGTAGGAGCAATCTATCAGAAAACATATCCTTCCCCCAATACTCCCCCACCTCGCTATTGTAATTGTAKCTTTGAAGTGAAGCTAGTTATAYTCTCATTTGGTKTTGACTTTGTTATRCTTTGCCCTGCAAGTTTGTCTGGTGGCCAYGTGGTTGGTAACTTCCCACCACATGAAGCATTTGGCATCGGTGGAACAAATAGTGTAAGAGGTTACGAAGAAGGTGCTGTGGGCTCTGGKAGATCTTATGCAGTTGGCTCTGGAGAAATTTCTTTTCCAATGATAGGGCCAGTTGGAGGAGTTATTTTTGCTGACTACGGCACTGATCTTGGATCAGGCCCCACCGTGCCTGGTGATCCTGCCGGGGCTCGGCATAAGCCTGGAAGCGGGTACGGATATGGATTTGGCATCAGACTCGACTCACCGCTGGGGCCTCTTCGCCTTGAATACGCATTTAACGATCAGCATGCAAAGAGATTTCACTTTGGGGTTGCACATGCTGCTTTTCTTCACGCGGTGTTTCAATATTCATCGTATTATTTTCGTGTTTTGCGTTACACTTTACCTCACCAAACAACTSGGAACTTCCATTGCTTGAAGAATACCAATCATCCATATTGTCCCCTAGGTCAGGTCCGCTTGCAATTGCTAGCAGGTGGCAGATATCAACCAATTTACTCAACCGACGTTGCAAATACTGATGCTAATGATAGCCGCTTTCGCGCACATCCCTACCCWAATTACTTCAATAATGGTTGGTTTAATATCAACCMTGTCCACCACTTCTCTTCCACCTCSACACCTTCCTCTGYTAATCCATATAATTATCACCCTCCTAATTATGGAGATTACCACAATTTCTGCTCATCAAACAACTTGATCAACAATATTAACAATACCCTTTTCACTAATCACCACCACCAATCTTCATCACCTCCCTCTCCTCCTCTAAGAGAAGCCCTTCCACTCCTCAGCCAAAGCCCTTCAAGAAATCACCACCACGAAGACATGCAAGAATCAGCTGCTGCTGATGACCATCAAAGCTTCTTGAGCTCTTCTAGGTCTGATGATATTGTTGATCATCAAGAAGAAGATGATGAAACTGTTACTGTGGCTTTACATTTRGGGCTTCCAAGCAGAACTCTATCTTCAGCTGATTTAATCTCCAGGCTCTCTTCCCCAGAAATCCCATCAGATAAAGAAGCAGATGTGACTGTTGCTTCAGCTGGTTTTGCATCAAACAGGCTCAACAAAGGACAGTACTGGATCCCTACTCCTGCTCAAATTTTAATTGGTCCAACCCAGTTCTCATGCCCTCTTTGCTTCAAGACCTTCAATAGATACAATAACATGCAGATGCATATGTGGGGGCATGGATCTCAATACAGGAAAGGGCCAGAATCTCTAAGGGGAACACAACCAACAGCCATGCTTAGACTGCCTTGCTATTGCTGTGCRCCAGGTTGCAGAAACAACATTGACCATCCAAGGGCAAAGCCTCTCAAAGACTTCAGAACCCTACAAACCCATTACAAGAGAAAGCATGGGATCAAACCCTTCATGTGTAGAAAATGTGGCAAGGCTTTTGCAGTGAGAGGTGATTGGCGAACCCATGAAAAAAATTGTGGCAAACTTTGGTATTGCACTTGTGGCTCTGATTTCAAGCACAAGAGGTCTCTCAAAGATCATATCAAGGCATTTGGACAAGGCCATGCAGCTTATGGAATTGACTGTTTTGAAGAGGAAGATGATGTAGCTTCTGAAATTGAGGAAAATGACTCCTCCTCCCATTAG
Protein Sequence:
- >MDP0000295064|Malus_domestica|C2H2|MDP0000295064
MPPNDDVRFTSSPSAKVPRSPENRHVDLTVLFARTRNSFSQLIDSLRIRSSFPKFPPLPILCSASLSLTRHADSAESEWRNRNADRGRFVGKSPLLCSASLALTRPDESTQSQQKGHASSRHDEERVLISEVLVRNKDGEELERKDLEMEALAALKACRANSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLIFQVKPNQEFQGLVCEGANVLPAKFLKDAFCDGYGKVINLKRLNEVISSINDWYMDRGLFAMVSAVEILSGGILKLQVSETEVNNISMRFLDRKTGEPTIGKTKPXTILRQLTTKKGQVYSMLQGKRDVETVLTMGLMEDVSIIPQPADAGKVDITMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNLFGRNQKLHVSLERGQIDSIFRINYSDPWIAGDDKRTSRTIMVQNSTTPGTLIHGNQLNGSNLTIGRVTAGIEFSRPIRPKFSGTAGLIFQHAGARDEKGDPIIKDVYSSPLTASGNTHDDMLLAKLESVYTGSGDHGSSMCVFNVEQGLPVLPEWLYFNRINARARKDVELGPTRVLVRYDHSVFVTVGAIYQKTYPSPNTPPPRYCNCXFEVKLVIXSFGXDFVXLCPASLSGGHVVGNFPPHEAFGIGGTNSVRGYEEGAVGSGRSYAVGSGEISFPMIGPVGGVIFADYGTDLGSGPTVPGDPAGARHKPGSGYGYGFGIRLDSPLGPLRLEYAFNDQHAKRFHFGVAHAAFLHAVFQYSSYYFRVLRYTLPHQTTXNFHCLKNTNHPYCPLGQVRLQLLAGGRYQPIYSTDVANTDANDSRFRAHPYPNYFNNGWFNINXVHHFSSTSTPSSXNPYNYHPPNYGDYHNFCSSNNLINNINNTLFTNHHHQSSSPPSPPLREALPLLSQSPSRNHHHEDMQESAAADDHQSFLSSSRSDDIVDHQEEDDETVTVALHLGLPSRTLSSADLISRLSSPEIPSDKEADVTVASAGFASNRLNKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGQGHAAYGIDCFEEEDDVASEIEENDSSSH