Information report for MDP0000281533
Gene Details
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Functional Annotation
- Refseq: XP_008358936.2 — uncharacterized protein LOC103422653
- TrEMBL: A0A498K8B0 — A0A498K8B0_MALDO; Uncharacterized protein
- STRING: XP_008358936.1 — (Malus domestica)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn079091, Achn069341
- Brassica napus: GSBRNA2T00122628001, GSBRNA2T00048156001
- Brassica oleracea: XP_013623868.1, XP_013619057.1
- Juglans regia: WALNUT_00004938-RA
- Nicotiana benthamiana: Niben101Scf35149g00005.1
- Prunus mume: XP_008225096.2
- Prunus persica: Prupe.6G093500.1.p, Prupe.6G093400.1.p
- Pyrus bretschneideri: Pbr033913.1, Pbr029043.1, Pbr033914.1, Pbr029044.1, Pbr023129.1
- Sesamum indicum: XP_011092508.1
- Vitis vinifera: GSVIVT01014844001
Sequences
CDS Sequence:
- >MDP0000281533|Malus_domestica|C2H2|MDP0000281533
ATGAAGACCTTTCAACGGAAAATCTTGATAGAATATCTGAATGGTGCTGATGATACCAAGGGTAAAGAACTAGTACTATATAATGGTCATAAAACCCAGGCAGTAGATCGAAGTCGAACATGTAGCGAGTGCGGTATGAGATTTCGGAATGGACAAGCTTTGGGAGGTCACATAAGCATCCACTTTCAACGCCATCTAGGTCCGAAGAACAACAAGAAGTTTAAGGTGAAGCAACAACAATTGTTATTAGAATACCCTTCTTGGAATAACAGTAGGCTCTCATGCCAAGTTTGCAACAAGACTTTCCCATCAATGAAATCCTTGTGTGGCCACATGGGATCGCATCGCCAAAGAGCCCAGTCTCCTCCTCCATCTTCTTCCTTATCTTCAGCTGATCAGTACTCGGACGGTGATAGTTATATTGATTCTGCAAGCAAGCACTACAAGTAYGCCAAATCAAAGAAAGGAAAATTCTTAGATGGCTACAAAGGCCATCATGTATGCCCTATTTGCTTAAAGACGTTCCCAACAGGGCAGGCACTTGGCGGCCATAAAAGATCTCACTACTATAAAGGAGGACCAGTTCTAAAAGCTGCAGCAGCAGCTAAAAACAAAGTTGCATCGACCAATGGACWTGAAGATTCAGCTAAAATCAAAGTTGCATCGGCCGATGATCGTGAAGATTGTGTGATCATAGATCCAGGAAGTCAACATTGGACTGATGAAACAATTCACGTTGCAAGTCGTAGAATATTATTAGACTTGGATCTCAACAAACCTCCTAAGGAGGATGATGAYGAAAAGAGATATCCGATTGGAGAGTCAACGTGGGACCTTAAAGCAGAGAAAAACAAGGACCTCAAAGAAGATTATGAAGAAGAAGATCAAGAAATCATGGATGATGATGATGTACATGCACAAGAGATTGAAGAACAAGTAGCGCTACGTGGCGATGATTATCATAAGGGTAAACAAGTAGTACTAGACAGTGATGTTCATCATCGAAGTGGAGATCGGGTTTGTGAGCAATGTGGGAAGAGATTTCAAAATGGAAAAGCTTTGGGAGGTCACAGAAAGGTTCATCTCAATCAGTCTCTTCTTCCCAAGAAGAACAAAGCATTGTTTAAGCAGAAGAAGAAACACGGTTCTTCCAAAGGCGGCAGCAGCAGTGAAGTCTCGTGCTACGTTTGCAAAAAGGATTTCCCATCTATCAAATCCTTGCACGGACACATGAGACTCCATCGCGAAAGAGACTGGAAGGGTGTCAGACCTCCTGGGGCTGTTCAGCCTCTTTCCGAAGAAAATACAGACAATGATGCAGCAATTTTTTTAGTAAACTGGAGGAATATTGAACAAAGACGCAGGATTGCTTACCAAAGAGATCCTAATGGTGAAGACAAAGTTGGTGAATTCGGACTGAAGAAGCTAATAGAAGAGTCACCAGTTGGATACAAAGGTAACCCTTCATCCAAGAACATCAAATTTGATGATGATAGTAAGAAAATTACCATGGAGGGAAGTAAAAGTTTTGGAGGTGCAAAACCCAAAAAAGATTTCAGCTTGTTTGGTCAAACCCACAAGCAAATTTCAAGGAAGCCTCAAGAGTTTAGAGTCACAAGATCAGATGCAACGTTGAGTGACATGAATGTAGACGAATCAGCCGGGTTTAGTAGTAAATATGCAGCTCACCAAGTTAGTGAATCGGCATTGGAGAAGGCAATAGAAGAGTCACCTGGTGGATACAAAGGCAATAAAACTTCGGAGAAAAGTAGGTCTGAGAGTGTGAATTTYGTGCCGAATAAGTTAAGCATTGGAGGTAAAGAAAAGGCTTCTGTGGATGATGATGATGATGGTCACGACGACAACGATGAGAATGTTGATCAGACTAGTTGGAAGGTGAAGCTGAAAAAGGCGATGAAGGAGGTTTCGAAAACAGGTAAAAAACCCACCAAAGACRCGGCTTTAAATGATCAAACCCACTACCAGATTTCACGAAGAACTCAGGAATTTGGTGCGAAGTATGCTGAAAGAGAAAATTACAATGGCCCTAGCGCTACCTGTAACCARGTACTTGAAAGAGCAGAAGAAGCTGAAGCAGTGGAGCACGAGACCAAAGAGTTTGTGTGCAACATCTGCCCCTGCAAGTTCTCAACAGGTCAGGCTCCGGGAGGCCACAAGAGATGTCACAACTATAGAGTRCCGGTGGAAGAAGCTCCGGAGACAGCAGAAGTAGCACCGGTGGCTGAAGAAGACGGTGAGATCACTACTGTTCCTGAAAAACTAGACTTGGATCTCAATCAACTTCCTTACGAATCAAACGATGAGTGA
Protein Sequence:
- >MDP0000281533|Malus_domestica|C2H2|MDP0000281533
MKTFQRKILIEYLNGADDTKGKELVLYNGHKTQAVDRSRTCSECGMRFRNGQALGGHISIHFQRHLGPKNNKKFKVKQQQLLLEYPSWNNSRLSCQVCNKTFPSMKSLCGHMGSHRQRAQSPPPSSSLSSADQYSDGDSYIDSASKHYKYAKSKKGKFLDGYKGHHVCPICLKTFPTGQALGGHKRSHYYKGGPVLKAAAAAKNKVASTNGXEDSAKIKVASADDREDCVIIDPGSQHWTDETIHVASRRILLDLDLNKPPKEDDDEKRYPIGESTWDLKAEKNKDLKEDYEEEDQEIMDDDDVHAQEIEEQVALRGDDYHKGKQVVLDSDVHHRSGDRVCEQCGKRFQNGKALGGHRKVHLNQSLLPKKNKALFKQKKKHGSSKGGSSSEVSCYVCKKDFPSIKSLHGHMRLHRERDWKGVRPPGAVQPLSEENTDNDAAIFLVNWRNIEQRRRIAYQRDPNGEDKVGEFGLKKLIEESPVGYKGNPSSKNIKFDDDSKKITMEGSKSFGGAKPKKDFSLFGQTHKQISRKPQEFRVTRSDATLSDMNVDESAGFSSKYAAHQVSESALEKAIEESPGGYKGNKTSEKSRSESVNFVPNKLSIGGKEKASVDDDDDGHDDNDENVDQTSWKVKLKKAMKEVSKTGKKPTKDXALNDQTHYQISRRTQEFGAKYAERENYNGPSATCNQVLERAEEAEAVEHETKEFVCNICPCKFSTGQAPGGHKRCHNYRVPVEEAPETAEVAPVAEEDGEITTVPEKLDLDLNQLPYESNDE