Information report for MDP0000271744
Gene Details
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Functional Annotation
- Refseq: XP_008344757.3 — hypermethylated in cancer 2 protein-like
- TrEMBL: A0A498K912 — A0A498K912_MALDO; Uncharacterized protein
- STRING: XP_008344757.1 — (Malus domestica)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g045316m
- Fragaria vesca: mrna01437.1-v1.0-hybrid
- Juglans regia: WALNUT_00003049-RA, WALNUT_00002144-RA
- Nicotiana benthamiana: Niben101Scf09582g01011.1, Niben101Scf35149g00005.1
- Nicotiana tabacum: XP_016481644.1, XP_016444536.1
- Petunia inflata: Peinf101Scf00145g19003.1, Peinf101Scf00055g15004.1
- Prunus mume: XP_008218252.1
- Prunus persica: Prupe.6G035400.1.p
- Pyrus bretschneideri: Pbr023129.1, Pbr041329.1
- Sesamum indicum: XP_011097689.1
Sequences
CDS Sequence:
- >MDP0000271744|Malus_domestica|C2H2|MDP0000271744
ATGGATATCGAACACCAAGAGACTAGGTTTCCACCACTAACTGCCAGCGATCAAGAGCGAAAGCCCGCAAAGATACTGAGCCGCGAAGAGATGGAGAGCAACAATGAAGGCATGTTTGTGAAGCTCAAGGTTGCAAAGCCGGAACCTTTAGGCCAAAACCCTCAAAACTTTTCTGCTGCTCCGCTGCCGGAATTTACCCGATTTTGCGAGGTCTGCTTCAAGGGTTTCAGCTCAGGTAAGGCTCTCGGAGGCCACAAAAGAATGCATGTTCAAGCTAACAGGGAATTGTTTAATCAGTCTCGCAAGAACACGATTTCATCAAAACCCAACAATTCGAAACCAAGCAATTCCAATGTTGGAAGCTCGAATGCTGGTGGGGTTTTGGGGATTGGAGGAAATAGCAGCACCATCAGCAATATGAAGCCTGTTTGTTGCGTTTGCGGCAAGAATTTTCCGTCGATGAAGTCACTTTTTGGGCATATGAGGTCGCATCCAGAGAGAGAGTGGAGGGGAATTCAGCCGCCYCCGACCGCCAAAAACAGCTCTTCTTCCACTGTGTCAGATGCTGTGCCTGATCAGAGTAATAGGAAAGCTCAGGAGGATCAGATTGAGTCTGATGAGACTTTTTTCAGGTCGAAAAGTTCGGTTCTTAATCTGTCCAAGACTCTGCCTAAATGGTCACAAACCGCAAGGAGAGGGAGGAAGAGCGGCAGCACGGGATTTGAGTCCAACTCTGACCAGTCCGTCTCCGGATTGGATTCGAGAAGTCCCAGGACTGTTGAAGAGGACGAAGAGCAGATGGAGGAAGCTGTCCATGATCTTTTGATGCTAGCTCAGGCCAATCCATTGGAAGGAGGAGGAGCTGATGAGACCATGTATGAGGTCACCAACAGCAATTTCTTGATCACCACCAATCAGGACCGAGAGGGTGGACTTCCATACCACGGACACACTGCACCCTCCACCGTGGGGTCCACAAACAAGAGGAAGGGAGCATCATCTGAGGTGAAGAGGAGTGAGAAAAAATGGTATGATGCATATGGTGGTGGGTTTGGTCAAGAAAAGTCAACGGTGAAGAATTTCTTGAAGCTTGGATTAATGGAGGAGGAAAATATTGGAAACTATAATAATATGGAGGATGAATTGTCAGACAGTCAGAATTCTGAGAGCATTGCGGTGGTGAGGAGGAAGAGGAGGAAGATGAAGTTGGTGGACTTGGAAGGAAGGCTGAGGTACAAGTGCAATCTCTGTGCGAAGTGTTTCCCGAGCCACCAAGCTCTGGGAGGACACATGTCAAGCCACAACAAGCTCAAGGGGATCACGGTGGCCCACTCATCAATGGAGGACCAGTCTGCATSCGCTGACGATCCGGCTGCTGAAGATAGGGTGCATGGTGATGAAGCAGAAAGAGTAGCACTTGATCATCTGCAGCATCACCAATGCAAAATCTGTAACAAGACCTTCCCAACAGGTCAGGCTTTGGGGGGTCACAAGAGGTGCCACTGGACTGGCCCCACYGAGCAGCAGCAGCAGCAGGTGGTGGTGGTGGGTCCTTCTGAGCAGCTACASAAGCAGGTGGTGGTCGTGGGTCCTTCTGAGCAGCTACAGMAGCAGCTGCAAGCTCATTCCAGTCAGACTATAGTAGGTGGTCGTGGTGGAGGAAAAGTTTTGAACTTTGACCTAAATGAGCTTCCACCAATGGAGGAGGATAACCAGGAAGGTGCAGCCACCAAACCTCAACAAAATCCAACTCCTACCCACAAATCTTCACGCCCCAAACCTGTTTTCTCGCTACATTTCTACAATTTGGAGCCCGGGAATCCGAGCTTCCAACTCGTCGTCCTCCACCCAGTTCAAGACGAAGCTCGAAAGCCCAGCGAGGAACCATGA
Protein Sequence:
- >MDP0000271744|Malus_domestica|C2H2|MDP0000271744
MDIEHQETRFPPLTASDQERKPAKILSREEMESNNEGMFVKLKVAKPEPLGQNPQNFSAAPLPEFTRFCEVCFKGFSSGKALGGHKRMHVQANRELFNQSRKNTISSKPNNSKPSNSNVGSSNAGGVLGIGGNSSTISNMKPVCCVCGKNFPSMKSLFGHMRSHPEREWRGIQPPPTAKNSSSSTVSDAVPDQSNRKAQEDQIESDETFFRSKSSVLNLSKTLPKWSQTARRGRKSGSTGFESNSDQSVSGLDSRSPRTVEEDEEQMEEAVHDLLMLAQANPLEGGGADETMYEVTNSNFLITTNQDREGGLPYHGHTAPSTVGSTNKRKGASSEVKRSEKKWYDAYGGGFGQEKSTVKNFLKLGLMEEENIGNYNNMEDELSDSQNSESIAVVRRKRRKMKLVDLEGRLRYKCNLCAKCFPSHQALGGHMSSHNKLKGITVAHSSMEDQSAXADDPAAEDRVHGDEAERVALDHLQHHQCKICNKTFPTGQALGGHKRCHWTGPTEQQQQQVVVVGPSEQLXKQVVVVGPSEQLQXQLQAHSSQTIVGGRGGGKVLNFDLNELPPMEEDNQEGAATKPQQNPTPTHKSSRPKPVFSLHFYNLEPGNPSFQLVVLHPVQDEARKPSEEP