Information report for MDP0000243278
Gene Details
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Functional Annotation
- Refseq: XP_008379850.3 — zinc finger protein 43-like
- TrEMBL: A0A498J4T6 — A0A498J4T6_MALDO; Uncharacterized protein
- STRING: XP_008379850.1 — (Malus domestica)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g014138m, orange1.1g011623m
- Fragaria vesca: mrna04320.1-v1.0-hybrid
- Juglans regia: WALNUT_00001116-RA
- Manihot esculenta: Manes.02G053200.1.p
- Populus trichocarpa: Potri.017G091800.1, Potri.017G091900.2, Potri.017G091900.1, Potri.004G118100.1
- Prunus mume: XP_008230999.1
- Prunus persica: Prupe.3G257500.1.p
- Pyrus bretschneideri: Pbr006411.1, Pbr038354.1
- Ricinus communis: 29630.m000796
- Ziziphus jujuba: XP_015879805.1
Sequences
CDS Sequence:
- >MDP0000243278|Malus_domestica|C2H2|MDP0000243278
TTACTGCATGTTTCTTCAATTGCTCGTAAAGTAGTTTTTAAAATTAAAAGTACAGCAATTTTTGGGGTTTTGACTTTTGAGAAGCTGATTTTTGGGTGCTTTTGTCAGTTGCCGGGACGTCAATATCTTCAGGACAAAATGATAAACAAACGGCCTTTTGATGTTGAGGATTCTTATGAGGTTGCTTGTAAGCACCCAAGACGATTGGAACATGCTAATGAGCCTGCTCCAATTGTGGATACTTTTTCTTTGAGTAGCAGCCCCCAGAAAWTTCAARTTTCAGATGGTGAAGGTGACGGGAGTTTTAGTAAATGTCCAGACGAAGGAAGGTCTGCAAGTGACTTGGGAACTGAATCCTCAAATGAGACCTACAAAGAACTTGAAACTGGTGCTTCTGGAAGCTCCTTCCGRTTTTGGTGGGCCAACAACAATATGTTTGAAGCTCATGAGAAGCTGATGGGTACCTKTATCATTTCTATGCCTGAGCTGGATACATTTGAAAACYATTTATGTGAAGATGTGARAGCTAGAAACAACTGTAAGTGTGCTGATGCAGGTTCTGTTAGATGCGTGARACWGCATGTYATGGAAGCAAGAGAGAAATTAAGGGAAGACCTTGGACATCACCTATKTGAAGAGTTGGGCTTTTATGAAATGGGAGAGGAGGTTGCAGAGAAATGGACTAAAGAGGAAGAGCRTGCCTTCCACGATGCCATCYTCTCTAACCCTGCATCATTGGGTAAGAACTTCTGGCACCACCTCTCAGTGGCTTTTCCTTTGCGACCGCACAAAGACCTTGTCAGCTATTATTTCAATGTTTTCATGCTCCRTAAGCGTGCTGAGCAGAATAGGTTTGACCCTCTAAACATTGATAGCGACGATGATGAGTGGCAAAAGAGCGAACTTGGAGTGSTCAATGATGACAAGGACGCTTTGGTGGAATCTCCTGTAAATCTAGATGCTCCTGCCTATAACCAGGTAGAACATTTAGGCTGTTTCAATGAGCACATTGAGGATGCTGATGACGTAGATGGTTGTAATGATGGTGCCGATKTGGTTGGTTGTGATGGAATTAAGGACGAGGATGCAGGTGATATAGATGATGGCTCAGGAGCTCATGTTGAGAATCCCCCTGGTGATAGTGGTGGTGCTACTGAAACTMGGCTTTTGGATAAAACTCCTAGCACAAGACAGTTGAGTTATATGCTCCACTTACGGAGGWGAAAGATTCAAGAATTGCAGTGTAGAATGACAACTCGTATATTTAAGTATGCGAAGCATCTTGACTGGCCTGCATCAGCACAATTAGATGTTGAGATRGCAAAGCATCCTCTGTTTCTTGAGCTCATTCAGCAATTTTTCCTCGAATGCGGTGGAAAGATTCAAACTTTCTCGGAAAATTGGATTCCGTCTCGGTTTTGGGATCTGGGTTCGTTTGCTTTTCTGGTTAAGATGATGGAACATGTGTGCAAGCTCTGCAAAAAAAGCTTTGTGAGCGGCAGGGTCTTGGGAGGTCACATGAGGTGCCATGGAGCAAGAAAATCTGCTAAAACAGAGAAAATGATCGAAATGTGCAGGGTGGATTTTGAGGTTGAAGACGATGATCACGCTGGTTATGGATTACGAAGGAACCCGAAAAAGTCCTGGAAGTTTTCAGGGGACTCRAAGTTTAAAGCTTCTGCAGGGGATGAGACCGTCTGCAGGTGCAGGGTTTGTGGCAAAGGGTTTGATTCGATGAGGGCGATGTTCGGGCACATGARGCATCACTCGGGGAGGGAGAGGAAGGAGACGCGGTCTTGCGAAGTTTGCTGTAAAGGATTTGAATCGTTGAGAGCTTTAGCTACTCATAGCAGATGCCACTCGGAAAGGATGAGGGGAACTGATGGATTGGAGACTGTTTCTTCAAGCAAGAAGCTTCCTGTGGATTCCTGTCAGTGCAGCAGTGAGACAATCGGGCTGATTCGGAGGAAAAGATCGAAAAGATTGAGGTACAAGAATACTAATTCAAGCTGTTCTTTTTCTAGTTTTAGTGTGAATGAATCTAAGTATGTTACTGAATTCGGGGAAGAAGTAGTAGAGGGGGCTATTTGTTTGATGATCATATCTGGTAGTGGAAGCAATTTGGGTCGAATTAGTTCGGTGACCGAGTCTTCGGATAACAATTCGTTGTCATTGGAAGTTCAATCACCAAGTCAAAAGAATTGGATCATGGRAAATAAGGGTGGTGTTTCTGGTTGTGATGTTTGTGATGATACTGTGAAATTGGTTGATTGCATTTCTGATTGTAAGAATGTCTCTGATGAGAAGAAAGTATTTGAATTTAGCGAAAACGGTCCTTGGTTTCWGAGTGATGAGGAAAAGAAKGTCGAAATGGAAGACAGGTTCTCCAGGGGTGCAGGTTAYAAGAGGCCTAGACTGGATGGGGAAACTGCATTTGGGCTGTGTGATACTGAAGTGGAAATGAAGGTGGATATTATCGAGGAAGTAGAATCGGATGTAGCTGCATTCGGATCAATGAAGTCAGGTTTGAACAATAAACCCATGTTATATGCTACTGAATCTGAAGTCTTTGCTGATTCCCAGAAGAAAAGAGAGCACAAGTGCAGGATTTGCAACAAGGTTTTCGGGACGTATCAGGCACTTGGAGCTCACCAAAGAGTTCACAAATCGACCAGCAATAGTTCTGCCGTAAAAATTGAGGATCATGAAGATAGAATTCCGATTGCCAAGCTTGAATGCAGTGRTAATTCAGCAGCAGAAGGGGAGACGGAAAGAGTAAYTGAGAATAAGGGTCACAAGTGCTCCATCTGCTTGAAGGTGTTTGCAACRGGCCAAGCTTTGGGTGGCCACAAGAGAGTTCATTTCGGCAAAGACCCCGAGAGAGGTGCACAAGAGTCCAGAGTGCTGAAGCAGCAGATTTCCAACATCTGCGATGCATTTGATCTTAGCCGTCCAGTCGAAAATGGTGATGTTGAATTCAAGTCCTGGTGGCTTGGAAATGAACATAAGCAAGAGCTGTTGATGGGTCTGATGCCCAACTGA
Protein Sequence:
- >MDP0000243278|Malus_domestica|C2H2|MDP0000243278
LLHVSSIARKVVFKIKSTAIFGVLTFEKLIFGCFCQLPGRQYLQDKMINKRPFDVEDSYEVACKHPRRLEHANEPAPIVDTFSLSSSPQKXQXSDGEGDGSFSKCPDEGRSASDLGTESSNETYKELETGASGSSFRFWWANNNMFEAHEKLMGTXIISMPELDTFENXLCEDVXARNNCKCADAGSVRCVXXHVMEAREKLREDLGHHLXEELGFYEMGEEVAEKWTKEEEXAFHDAIXSNPASLGKNFWHHLSVAFPLRPHKDLVSYYFNVFMLXKRAEQNRFDPLNIDSDDDEWQKSELGVXNDDKDALVESPVNLDAPAYNQVEHLGCFNEHIEDADDVDGCNDGADXVGCDGIKDEDAGDIDDGSGAHVENPPGDSGGATETXLLDKTPSTRQLSYMLHLRRXKIQELQCRMTTRIFKYAKHLDWPASAQLDVEXAKHPLFLELIQQFFLECGGKIQTFSENWIPSRFWDLGSFAFLVKMMEHVCKLCKKSFVSGRVLGGHMRCHGARKSAKTEKMIEMCRVDFEVEDDDHAGYGLRRNPKKSWKFSGDSKFKASAGDETVCRCRVCGKGFDSMRAMFGHMXHHSGRERKETRSCEVCCKGFESLRALATHSRCHSERMRGTDGLETVSSSKKLPVDSCQCSSETIGLIRRKRSKRLRYKNTNSSCSFSSFSVNESKYVTEFGEEVVEGAICLMIISGSGSNLGRISSVTESSDNNSLSLEVQSPSQKNWIMXNKGGVSGCDVCDDTVKLVDCISDCKNVSDEKKVFEFSENGPWFXSDEEKXVEMEDRFSRGAGYKRPRLDGETAFGLCDTEVEMKVDIIEEVESDVAAFGSMKSGLNNKPMLYATESEVFADSQKKREHKCRICNKVFGTYQALGAHQRVHKSTSNSSAVKIEDHEDRIPIAKLECSXNSAAEGETERVXENKGHKCSICLKVFATGQALGGHKRVHFGKDPERGAQESRVLKQQISNICDAFDLSRPVENGDVEFKSWWLGNEHKQELLMGLMPN