Information report for MDP0000233616
Gene Details
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Functional Annotation
- Refseq: XP_017192004.2 — polyadenylation and cleavage factor homolog 4
- TrEMBL: A0A498IEZ8 — A0A498IEZ8_MALDO; Uncharacterized protein
- STRING: XP_008386987.1 — (Malus domestica)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Artemisia annua: Aan015184
- Citrullus lanatus: Cla97C03G053860
- Cucumis melo: MELO3C004944
- Cucumis sativus: CsGy1G013510
- Lactuca sativa: Lsa010343, Lsa014526
- Musa acuminata: GSMUA_Achr11P26100_001, Ma06_g20240
- Panicum virgatum: Pavir.2KG218200.2.p, Pavir.2KG218200.1.p, Pavir.2NG262600.1.p
- Solanum lycopersicum: Solyc09g009120.2.1
Sequences
CDS Sequence:
- >MDP0000233616|Malus_domestica|C2H2|MDP0000233616
ATGGCTAGCGACTTTTCTGGGGTTATGGCAAACTCAATTGATGATGATGCAGAGAGGCCAGCCAGAGCAGCAAGTATCAGTGCTGGACGACCATGGGTTGATCCTGCTGTTAAAATGCATCGTTCCAATACAGATGCACTTAGTGATCGTGTTCATGAGGAGAACATTGGTGCTGAATATGGAGAATACGAATATGGTTCAGATCTTCACAGGAATTCAAACCCGGGAATTGGAAGAATTGGTGGGAAGATTACAGAAACACTACCCACCCAAAGAAATGGTTTTAATATCAAGCATGGACTTACAAATTACTCGTCATCTAAATCTACGAATGCTGATCCTCGCTTAAAGACAGCACCAGGCATTGCAACTAGAAACAGTGGTGGCCTGTCTAGTAGCTGGAAGAATTCTGAGGAAGAGGAGTTCATGTGGGATGATATGAACTCAAGATTAACAGATCATGGCCCTCCAGATATTTCTAGTAACTCAAGAAAAGATCACTGGGCTTCTGATGATTCAGAGAAATTGGGCTTTGGAGCTGATATGGATACCTCTGCTAATCCTACTGAACAGAAAGACCTATCTGCTCTTGGTCAGCGAATGTCATCACCTTGGACATTGCAGGACTCTATCGGTATTGACAGGCTGACCCCTTCTGGTACTCCTGTCATTAGTTCGGTTCATTCAGAGCGTTATGCTTCAAGTTTAAGTGGGCTATCGACAAGTGGAGATTCTTCTGTGGCCAGGATGGGAAGTAGAGCACAAGTAGCGTCTTCTCGAATTGGAACGTCAAGTCTAGGGTTTAATGCAGCAGCAGGGCCTACTGGAGCTTTAGGAAAACAACAGCTTCAGTCTGTGAGAGCTGCATCACCATCTGGACAGTCATCGATGCACCAATATTCTCCCTCACCTACATCTGCAGTACATCCCCGTCATCACTCGCAAAGTTTAGCTGACCAAGACTTTGCTGAGGAACCTTTGCCAATTCCAACTCCCAATGTTAGATTGGGCAGCAAAGCAAAATCMCAGCCTCAAGATCTATCTTCGTCAATTCCTGACATCCAATCAAGGCACAAATACCCCTTTCGACAACAACCAGACAGTATAGAGTCTGAATCTTTCGGTCACACTAAGAAGCCTCATGTGCCACAGGTCTCTACTTTTTCAACTCCCTCAACTGTTGGAGATTCTATACCAGATCTTTCAAATGTCCTTGCTGCAGAATCCTCAGGACAGTTGAACACAAGTAGTTTGTTGGCTGCTGTTATGAAGACTGGAATACTCTCTGACAAATCAATTACTTGTAGCCTGCCCAATTTGAATCGTCGGGACATGGGACATATTCCATCACAGTCTGGTGTTCAGCCTCCCTTGCAAAGTGGACCCTCCCCTACCCTTGCACTCCCAGGGCCCAAGGTTGCATCAGCACCTTCATCAGGTCACCTTTCTGGTGAGAACTCGCCAGCTTCCTCAAATGTATCACAGAAGAAGGTAGCACATCTGCCAATTCCACCTAGCCAACCTCCTTCCTCTCTTGATGGCAGTGCGTCAGCAAGTTCAACTGTGGTGAGTAATGCCTCAGATCCAATTTCAAACCTTTTAAGCTCCTTAGTTGCAAAGGGTTTGATATCTGCATCAAAGTCGGAGTCACCCACTCCTGTGCCATCCCAAAAGCTGACTGAACTGCACAACAAGGGCCTAGGTGCACCTGCCTCCAAATCAGTGTCAGTATCTCCAGTTTCAGTTTCAGTCTCTCCAAGTCGTCCTGTTACATCCCAAACTGATGCGTCTCTCCCAGAACCTGTAGCTAAAACATCTGCTGCCTTACCTCAATCTACCAAGACAGAAATACAAAACCTAATAGGCATTGCCTTTAAGCCAGATATAATCCGAGAATTTCATCCAGCTGTGATAGATGAACTTTTTAATGACCTTCCATATACGTGTAGCATATGTGGCCTTAGGCTCAAACTTAAAGAACGGCTTGAGAGACATTTGGAATGGCATGCTTTGAAAAATCCCGAAGGCAGTGGTTCAGTTATGGCATCAAGGAAGTGGTATCCAGATTTAACCAGCTGGGTTGCTGGAAGGACAGTACCCCCTTTGGTACCGGAGGCCATCAATTCAATAGACGAGCCTAATGAGATGATGGATATTGATGAGCCCATAGTTCCAGCAGACGAAAACCAATGTGCATGTGTTATATGTGGTGATATTTTTGAAGATTTTTACTGTCAAGAAAGGGATGAATGGATGTTCAAAGGAGCTTCGTACATGAGTATTCCATCTGCGGCCGGTAAGATGGAAACCACAGAGGAGAGTGTTTTGAAAGGTCCCATTGTGCATGCAAATTGTACAGTGGAAAGTTCACTCTCTGATAGCCATGTTAAATTGATGCTAAGATCTTACCTCTTACTTTTTGGCAGGAACCAGATGCTTAGTGCTCGAAGCTCGAAGCTGAAGAGACAAACTCCATGCATTCCAAACTCATGA
Protein Sequence:
- >MDP0000233616|Malus_domestica|C2H2|MDP0000233616
MASDFSGVMANSIDDDAERPARAASISAGRPWVDPAVKMHRSNTDALSDRVHEENIGAEYGEYEYGSDLHRNSNPGIGRIGGKITETLPTQRNGFNIKHGLTNYSSSKSTNADPRLKTAPGIATRNSGGLSSSWKNSEEEEFMWDDMNSRLTDHGPPDISSNSRKDHWASDDSEKLGFGADMDTSANPTEQKDLSALGQRMSSPWTLQDSIGIDRLTPSGTPVISSVHSERYASSLSGLSTSGDSSVARMGSRAQVASSRIGTSSLGFNAAAGPTGALGKQQLQSVRAASPSGQSSMHQYSPSPTSAVHPRHHSQSLADQDFAEEPLPIPTPNVRLGSKAKSQPQDLSSSIPDIQSRHKYPFRQQPDSIESESFGHTKKPHVPQVSTFSTPSTVGDSIPDLSNVLAAESSGQLNTSSLLAAVMKTGILSDKSITCSLPNLNRRDMGHIPSQSGVQPPLQSGPSPTLALPGPKVASAPSSGHLSGENSPASSNVSQKKVAHLPIPPSQPPSSLDGSASASSTVVSNASDPISNLLSSLVAKGLISASKSESPTPVPSQKLTELHNKGLGAPASKSVSVSPVSVSVSPSRPVTSQTDASLPEPVAKTSAALPQSTKTEIQNLIGIAFKPDIIREFHPAVIDELFNDLPYTCSICGLRLKLKERLERHLEWHALKNPEGSGSVMASRKWYPDLTSWVAGRTVPPLVPEAINSIDEPNEMMDIDEPIVPADENQCACVICGDIFEDFYCQERDEWMFKGASYMSIPSAAGKMETTEESVLKGPIVHANCTVESSLSDSHVKLMLRSYLLLFGRNQMLSARSSKLKRQTPCIPNS