Information report for MDP0000191281
Gene Details
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Functional Annotation
- Refseq: XP_028964500.1 — uncharacterized protein LOC103444269
- Refseq: XP_028964501.1 — uncharacterized protein LOC103444269
- Refseq: XP_028964502.1 — uncharacterized protein LOC103444269
- TrEMBL: A0A498JA84 — A0A498JA84_MALDO; Uncharacterized protein
- STRING: XP_008381417.1 — (Malus domestica)
- GO:0005739 — Cellular Component — mitochondrion
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn002631
- Gossypium arboreum: Cotton_A_10286_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D11G2046, Gh_A11G1928
- Manihot esculenta: Manes.02G096400.1.p
- Nicotiana tabacum: XP_016484127.1, XP_016484126.1
- Prunus mume: XP_016651308.1
- Prunus persica: Prupe.5G079100.1.p, Prupe.2G054400.1.p, Prupe.5G079100.3.p
- Pyrus bretschneideri: Pbr005306.1
- Ricinus communis: 30190.m011015
- Ziziphus jujuba: XP_015886183.1, XP_015886176.1, XP_015886166.1
Sequences
CDS Sequence:
- >MDP0000191281|Malus_domestica|C2H2|MDP0000191281
ATGTATGCCAATGCTTTCAAAGAAAAACTCAAATTCGTTGATGGGGTGGTACCTGAGGAACCTCTCGAAGCGGTTGGAGAAATTCGGGGCCGAAAATTTGATCTGCTTGATGAGATTGGCKAGGGAGAAGAGGGAGTTTCTGYTGATGTGCTCGGCGGAGGGGAAGGAYAAGCAGCGGGTGGCGTGGAGGTAGTCGGTGAGGACCTGCTGAGCTTGGCTGATGGTTTYGGACTTGTACCTTGGGGGGACGTTGGGGAGCTTCGGGAGCCTTGCGGCGGCGGAGGCGGCGGCGGCGGTTGCAGCGGAGAAATGGTGGGAAAGGAGGAGGGTGTAGAGGCATTTGGGCAGGGGCATGCTATCACTCCTTCTAAAGGGCAAAACATGCCACCCCCAACTCCAAATCCCAACTTTCCTAGTTCCTGCCACCCTAGTACCCATACCCGGGTCCGAGTCCGCCCAATCGCGGCCCTGAAGCGCCGCCGTGACGACGAGTTTGCTGCGGTGTTCGTTTCCTTCTCAAGGTCACAAGTTCAATCCAGCAGGCCAGAAACCCTAATCCCTTTTACCCAGTTCAATAGATATTGTCATTTTCAATCTACAACGGGTTTCTATTCTTCGAATCCTTCCTCGTGTTTGGCACCAAAGAAAATTTCTGAAAACAGTGTTGCGATTTTCTGGGATTTGGATACCAGACCACCCAAATCAGTCTCACCGTACAAAGCCGCCGTCAAGCTCAAGACTGCGGCTTCATCTTTCGGGATTGTCCGGCATATGATAGCGTATGCGAATCGAAATGCGTTGAACTATGTTCCACAAGTTATTTGGGAAAGGAAAGAGAGGAATAGGGTTGTGATTAGGGATGGTGAGTCGAATATATGTCCGGTTTGTGGGAGAAGATTTTATACCAATGAGAAGCTTATGAATCATTTTAAGCARATTCATGAGACGGAACATGTGAAGAGGTTGAATCAGATTGAGTCTGCTAGAGGGAGTAGGAGAGTGAAGTTGGTGGGTAAGTATTCCATGAAGATGGAGAAGTATAAGAAAGCTGCAAGGGATGTTTTGACAACCAAGGTGGGGCGTGGTTTAGCGGATGAGGTGRAGCAGGCAGGGTTWTGGATTCGGAGTGTGTTGGATAAGCCACAGGGGGTGAAAGTCGCATTGAGAAATCACATTGTGGACATGATGGATCACAGGAGAGTTRACTGTTTGATGCTTGTGTCGGATGATTCGCATTTTGTGGATGTTGTGATGGAGGCAAAGTTRAGATGTCTGAAGACGGTTGTTGTGGGGGATTTTGGCGATGGGGCTCTGAAGAGGGCTGCGGATTCTGGTTTTTCTTGGAATGAAATTTTGATTGGGAAGGCTGAAAAGGAGGCAGTGTCAGTTGTGGGGAAATGGAAAGACCGTGATGTGTTGAAGAGATTGGAGTGGACGTTTATGGTGAAAGCGAGAGATTGGAGTGGACAGACAAGTCAGATGGGGATCAAAGTTTGCATAAATGGAATGATGAGGTTTATGGTGAAAGCGAGGATGACGATATCGAAGGTTTTGTTGGTGAGGCGAATSACAATTTGGGGAAGGACGATGCTTGCAACTGGTGGGAGCTTGACTCTGATTCCGAGGCCATTTCATTACAATCATCCCGATGACACACGACTCTTTGTGAAACCTGGTCGACTATCATTTACCTATTCTTGGCTAGTRTATGCCTTATTTCAAGACATAGTGAATTGTGTGCCTGGATWATCAGTTTCTGTTTATGGTGGGAAAGGTGAGCGAAAAGCATACACAAATTCCGTTTTGTGGTAG
Protein Sequence:
- >MDP0000191281|Malus_domestica|C2H2|MDP0000191281
MYANAFKEKLKFVDGVVPEEPLEAVGEIRGRKFDLLDEIGXGEEGVSXDVLGGGEGXAAGGVEVVGEDLLSLADGFGLVPWGDVGELREPCGGGGGGGGCSGEMVGKEEGVEAFGQGHAITPSKGQNMPPPTPNPNFPSSCHPSTHTRVRVRPIAALKRRRDDEFAAVFVSFSRSQVQSSRPETLIPFTQFNRYCHFQSTTGFYSSNPSSCLAPKKISENSVAIFWDLDTRPPKSVSPYKAAVKLKTAASSFGIVRHMIAYANRNALNYVPQVIWERKERNRVVIRDGESNICPVCGRRFYTNEKLMNHFKQIHETEHVKRLNQIESARGSRRVKLVGKYSMKMEKYKKAARDVLTTKVGRGLADEVXQAGXWIRSVLDKPQGVKVALRNHIVDMMDHRRVXCLMLVSDDSHFVDVVMEAKLRCLKTVVVGDFGDGALKRAADSGFSWNEILIGKAEKEAVSVVGKWKDRDVLKRLEWTFMVKARDWSGQTSQMGIKVCINGMMRFMVKARMTISKVLLVRRITIWGRTMLATGGSLTLIPRPFHYNHPDDTRLFVKPGRLSFTYSWLVYALFQDIVNCVPGXSVSVYGGKGERKAYTNSVLW