Information report for Lus10037989
Gene Details
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Functional Annotation
- Refseq: XP_020532451.1 — probable lysine-specific demethylase ELF6 isoform X1
- Swissprot: Q6BDA0 — ELF6_ARATH; Probable lysine-specific demethylase ELF6
- TrEMBL: A0A2I4FAW6 — A0A2I4FAW6_JUGRE; probable lysine-specific demethylase ELF6
- STRING: Lus10037989 — (Linum usitatissimum)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Glycine max: Glyma.20G181000.1.p, Glyma.20G181000
- Gossypium arboreum: Cotton_A_31963_BGI-A2_v1.0
- Gossypium hirsutum: Gohir.A05G296400, Gh_A05G2549
- Juglans regia: WALNUT_00007284-RA, Jr07_34620
- Manihot esculenta: Manes.07G097600.1.p, MANES_07G097600
- Populus trichocarpa: Potri.010G224700.1, POPTR_010G224700v3, Potri.008G037800.1, POPTR_008G037800v3
Sequences
CDS Sequence:
- >Lus10037989|Linum_usitatissimum|C2H2|Lus10037989
ATGGGAAACGTGGAAATACCGAAATGGCTGCAAGGGTTGCCACTGGCTCCCGAGTTCCGGCCAACTGATACGGAATTCGCTGACCCGATTGCTTATATTTCGAAAATTGAGAAGGAAGCCGGTGCTTTTGGGATATGCAAGATTATCCCACCTCTACCTAAACCTTCCAAGAAATATGTGTTTTCCAATCTGAATAAGACCCTTGCAAAATCGCCTGAATTGGGGGATAATTGTTCCTCTTTGAAATCGGGTTCTGGGGTTGATGGTAGAGATGGAGATATGAGGGCGGTGTTTACGACAAGGCACCAAGAACTAGGACAGAGTATCAAGAAGAAGGGTGTCGAAAAGGAGACTCCGCAAATGGTTTTTCATAAACAAGTGTGGCAAAGTGGAGAGGTCTATACATTGGAACAGTTCGAATCTAAGTCCAAGGCCTTTGCAAAGAGTATGTTGGGTTCAGTTAAGGAGGTTAGTCCTTTAGTCATAGAGGCCCTGTTCTGGAAGGCAGCTTTTGAGAAACCAATCTATGTGGAATATGCAAATGATGTGCCTGGGTCAGCTTTCGGAGAACCAGAAGGTCAATTTCGGTATTTTAACCGACGGAGAAGGAGAAGGGCATCATACCAATCCTACCGAAGGCATGGGGAAAGCTACAATTGCCAGAACAATGAATTGATAGCTGTTGATAATATTGTACCTGATGAGGTGGTTGATGCTTCTATTAAAAATGATCCAAGTCCATCGTCTCTGTCTACTTCATCAACTGCACTTTCATCCAGATTTGTGAAATCTTATAACCGAAAAGGTGAAAGTTCTAGTTGCAATGTGGAGGGCACAGCAGGCTGGAAGCTTTCTAACAGCCCTTGGAATCTCCAATTGATTGCTCGTTCACCTGGGTCCCTCACACGCTATATGCCAGATGATATCCCAGGGGTTACTTCTCCTATGGTTTATATTGGTATGTTATACAGTTGGTTTGCTTGGCATGTTGAGGATCATGAGCTTCACAGCATGAATTTTCTCCATACTGGCTCTCCAAAAACATGGTATTCTGTTCCCGGAGATTATGCTTTTTCTTTTGAGGAGGTTATCCGCAGACAGGCTTATGGTGGTAAATTGGATCGTTTAGCTTCTTTGTCAAGGTTGGGTGAGAAGACAACCCTTCTGTCACCTGATGTAGTTGTTTCATCTGGCATTCCTTGTTGCAGGTTAATCCAGAACCCGGGTGAGTTTGTTGTGACTTTTCCAAGGGCTTATCATGTAGGATTCAGCCACGGTTTTAATTGTGGAGAAGCTGCTAATTTTAGTACTCCGCAATGGCTTGAAGTAGCTAAGGAAGCTGCAGTACGTAGAGCTGCTATGAATTACCTTCCAATGCTTTCGCATCAGCAACTACTATACCTGTTGACAATGTCTTTTGTCCTAAGAGTCCCAAGGTCACTCCTTCCTGGTGCTAGGAGTTCTCGCCTAAGAGATCGCCAGAAAGAAGAAAGAGAGTTGTCTGTGAAGAGGGCTTTTATAGAAGATCTACTACGAGAGAATAATACTTTACGCACTATTCTCAGAAAAGGTCCTGGTTGTAAAGCTGTGATATGGAATCCTGATTTGCTACCTCGTGCAAGTAAACAATCTCAATTGATTGATACCCGTGCTGCTGCTACCAGAATGGAAGAAAATTTATATCATACTCGGCCTGAACATAACAATAACAGTACAAGCAATCTGTTTACAGAAATGAGCAAGTATGTTGAGTCTTTAAATGATTTATATGCTGATGGAGGTGATATCTCATGTGATTTTCAAGTCGATTCTGGGTCACTGGTTTGTATAGCTTGTGGAATCCTTGGTTTTCCATTCATGTCTGTGGTGCAACCATCTGATAAAGCTTCAGAAGAGTCGTTATATGTGGATCATACTTTGATTAGTGATGGAAAAGCAACATTCAGAAGGGTCCATTCTTCTGCAGATCGCAATGGTTTTGCTCTGTATTTGTTAGATAATCCTCATCCTGTGCCTGACCCAAGTCCAGCTCTAAAAGATCTTAAAGTGCCTACTGGATGGGATATTTCCAATAAATTTCTCAGGCCACGGATTTTCTGCCTGGAGCATGGCCTTCAAATTTGTGAGCTTTTACAGTCTAGAGGTGGAGCAAACATGCTTGTAATTTGCCATTCAGATTTTCAGAAAATGAAGGCCTATGCTACTTCTATTGTGGAGGAGATCAATGTTCCTTTTGACTACACCCAGATTCCACTAGAAAGCGCGTTGAACGAAGATTTGAACTTGATTGACCTTGCGATTGATGGCCATGACTGGGATGGACGTGGGGAGGATTGGACATCCAAAATGGGTGTCAACTTACTACACTGTGTGAAGATCCGGAAAAAGTCTCCATCAACGCAAGTGCATCATGCATTGGCTTTAGCAGGACTCTTTACTGAAGGAAGTCTCAGTTCGGAGTTCTCTACACTTAAATGGAAATCCAGAAGATCTCGGTCAAGGAACAAGTTGAATCATTCTGTCAGTTTTTCAGGTGGAAAGTTTGAGTCTAAGAAAGATGATGCGCTGGAGAAAGTTTCAGATAGTGTAGCCAAAAAAGAAGAAAAGCTTCTATGCTATACAAGACGGAAGTCTAAAACCAAAGAAGATTGTTCTGTAAATGGTGGTCAAGATCGGCTACTCAACCGGCAAACCAGCAGGGTTTCTCGAAACAGTAAGGTAGGAATAAATAGTTTGGAGGATCTTGGGGTCAATCCTGATGGGGTTTCTGAAAACCACAATGGTGTTCAGTTTCATGAAGCTACTGCTACCACGACTGCAATTGTGAATTCTGAGCCTTCAGTAGATGCGACATGTTCTGCTGTCATGTCTGATCCAGAAGCCTTCTGTAATTCTGAAATTCGGGATGGCAAAACTGCTGCATTAGAAAGCAGTGAGCGCGGGCTCAATTCTATTGTAGCTACAGATAATGGGTTATTGGTGATTTGCAAAGATGATACTGAAAATATGATCACTTATGATAGAGCTTCTAAAAGGCAGCTCAATCTCCAGGTGGATAGAGATGGTCTCGTCAGTGAGACCTCAGGTATTGCTAATTCACCTTCAGCTGAAGCTGAGCTTGTAGTAGCTGAGACTTCTTGCACAAAGCGTGAAGCTTGTAATCGTGTGACTTCACAGAGTGAGCAACAGGAAGAAGGCCAAAAATGGCCTAATAGCAATCATGTTATTTCATCTAATGAGACAGTGACTACGGAGACCATTACATTGAATGGTGAAGCTTGCGAGCAGTTGCAAGACATCTCTCTTGTAGAAGACGCTGTGCAGCAACAAATTGAAACAGAATGTTGTGATGATAGGGAGGAAATGATGCAGTCGAAACTTCAATCAGCAGAAGAGCCAGACTTGGGGCCTTTGGATGGAAGTGGAAGCTCTGAGAGTGTTAGGGAGCAAATAGACCTCCCAGTTACAAACCAAGAGCTAGCTTCCAGTTCCACCTCAGAAATGGAGGATCAGCCTATTCCTGAAACAATGGAAGCATGCTGCGAGCCTTGTGCAACTAGTCGTACTGATGAAGATTCATCTGCTTTTAAGAATTCAGATGGAGAACTAGAGCAAGTAAATAACTCATTTGATAGGATGCCAGAGTGTTTTGAAATTCGGACGGGTTCTGAAATGGATGAAGAGTCGTCTGCTGTAAGAAGTGCAGTTGAAGAAAAAAGATCATCTCCACCACACGGACATGGAAGTATTGAGTCTGCTAGTTCTGGATCAATCCATATCAAGGTCAGAAAGAGGAGAAGAGAAGTGGACCAGATAACAGAAGGTAATCTCAATTTCAAGAGCTTCGTTAGAAGTCCATGTGAAAGGTTGAGACCAAGAAGAATGGGCAGAGATGACCCAAGCACAAGCGGAGCTGATTTGGAAAAAATTCCTGTGGAGAATGCAGTAGCAAAGAGGTCGAGGTTGAAGAGGCCTTCAAATGATCCAGTTAATAATCAGTTGAAGAAAAAACAGGTGACAAAGAGACCTCACAAGTGTGAAATAGAAGGTTGCGGCATGAGATTTGAGACAAAGGAAGACCTAGCCTTGCACAGTCGCAATCGATGCCCATATGAAGGATGCAGGAAGAAATTTAGTTCACACAGGTATGCATTGATACATCAGCGGGTGCATGACGACGATAGACCCCTGAAATGTCCATGGAAAGGTTGCAAAATGGCGTTTAAGTGGGCATGGGCTCGGACTGAGCACATAAGGGTGCATACAGGTGAGAAGCCCTACCATTGCAAAGTTGATGGATGTGGGCTTGCATTCAGGTTTGTATCAGACTTCAGCCGCCATAGGAGAAAAACAGGACATCATGTGAACTCCCAACCAGACTGA
Protein Sequence:
- >Lus10037989|Linum_usitatissimum|C2H2|Lus10037989
MGNVEIPKWLQGLPLAPEFRPTDTEFADPIAYISKIEKEAGAFGICKIIPPLPKPSKKYVFSNLNKTLAKSPELGDNCSSLKSGSGVDGRDGDMRAVFTTRHQELGQSIKKKGVEKETPQMVFHKQVWQSGEVYTLEQFESKSKAFAKSMLGSVKEVSPLVIEALFWKAAFEKPIYVEYANDVPGSAFGEPEGQFRYFNRRRRRRASYQSYRRHGESYNCQNNELIAVDNIVPDEVVDASIKNDPSPSSLSTSSTALSSRFVKSYNRKGESSSCNVEGTAGWKLSNSPWNLQLIARSPGSLTRYMPDDIPGVTSPMVYIGMLYSWFAWHVEDHELHSMNFLHTGSPKTWYSVPGDYAFSFEEVIRRQAYGGKLDRLASLSRLGEKTTLLSPDVVVSSGIPCCRLIQNPGEFVVTFPRAYHVGFSHGFNCGEAANFSTPQWLEVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVLRVPRSLLPGARSSRLRDRQKEERELSVKRAFIEDLLRENNTLRTILRKGPGCKAVIWNPDLLPRASKQSQLIDTRAAATRMEENLYHTRPEHNNNSTSNLFTEMSKYVESLNDLYADGGDISCDFQVDSGSLVCIACGILGFPFMSVVQPSDKASEESLYVDHTLISDGKATFRRVHSSADRNGFALYLLDNPHPVPDPSPALKDLKVPTGWDISNKFLRPRIFCLEHGLQICELLQSRGGANMLVICHSDFQKMKAYATSIVEEINVPFDYTQIPLESALNEDLNLIDLAIDGHDWDGRGEDWTSKMGVNLLHCVKIRKKSPSTQVHHALALAGLFTEGSLSSEFSTLKWKSRRSRSRNKLNHSVSFSGGKFESKKDDALEKVSDSVAKKEEKLLCYTRRKSKTKEDCSVNGGQDRLLNRQTSRVSRNSKVGINSLEDLGVNPDGVSENHNGVQFHEATATTTAIVNSEPSVDATCSAVMSDPEAFCNSEIRDGKTAALESSERGLNSIVATDNGLLVICKDDTENMITYDRASKRQLNLQVDRDGLVSETSGIANSPSAEAELVVAETSCTKREACNRVTSQSEQQEEGQKWPNSNHVISSNETVTTETITLNGEACEQLQDISLVEDAVQQQIETECCDDREEMMQSKLQSAEEPDLGPLDGSGSSESVREQIDLPVTNQELASSSTSEMEDQPIPETMEACCEPCATSRTDEDSSAFKNSDGELEQVNNSFDRMPECFEIRTGSEMDEESSAVRSAVEEKRSSPPHGHGSIESASSGSIHIKVRKRRREVDQITEGNLNFKSFVRSPCERLRPRRMGRDDPSTSGADLEKIPVENAVAKRSRLKRPSNDPVNNQLKKKQVTKRPHKCEIEGCGMRFETKEDLALHSRNRCPYEGCRKKFSSHRYALIHQRVHDDDRPLKCPWKGCKMAFKWAWARTEHIRVHTGEKPYHCKVDGCGLAFRFVSDFSRHRRKTGHHVNSQPD*