Information report for Lus10004840
Gene Details
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Functional Annotation
- Refseq: XP_021649999.1 — protein indeterminate-domain 7-like
- Refseq: XP_024036713.1 — protein indeterminate-domain 7
- Refseq: XP_024036715.1 — protein indeterminate-domain 7
- Refseq: XP_024036716.1 — protein indeterminate-domain 7
- Refseq: XP_024036717.1 — protein indeterminate-domain 7
- TrEMBL: A0A067FD52 — A0A067FD52_CITSI; Uncharacterized protein
- TrEMBL: A0A1Q3DDM0 — A0A1Q3DDM0_CEPFO; Zf-C2H2_jaz domain-containing protein
- STRING: Lus10004840 — (Linum usitatissimum)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g007898m
- Glycine max: Glyma.15G024500.4.p, Glyma.15G024500.3.p, Glyma.15G024500.2.p
- Lotus japonicus: Lj3g3v0323160.3, Lj3g3v2691880.1
- Manihot esculenta: Manes.04G140300.1.p, Manes.11G025600.1.p
- Medicago truncatula: Medtr2g099990.1
- Populus trichocarpa: Potri.003G040100.1, Potri.003G036900.5, Potri.003G036900.4, Potri.003G036900.2, Potri.003G036900.1
- Pyrus bretschneideri: Pbr032492.1
- Ricinus communis: 28694.m000662
Sequences
CDS Sequence:
- >Lus10004840|Linum_usitatissimum|C2H2|Lus10004840
ATGTCAAACTTGACTACATCAGCATCTGGCACTGAAGCAAGTGTTTCTTCTTCTGGTCATCATCCACCTCCAGATATTTCATCATCAGCTCAGCAGCCACCCCTTAAAAAGAAGAGAAACATGCCAGGCAACCCAGATCCAGATTCAGAGGTGATATCTCTATCACCAAAATCACTGATGGCAACAAACAGGTTCCTATGCGAGATCTGTAACAAAGGGTTCCAGAGGGACCAGAATCTACAGCTTCATCGGAGAGGGCACAACCTGCCATGGAAGCTGAAGCAGAGAAACAAAGACGAAGTGGTTAGAAGGAAGGTGTATGTGTGTCCCGAGCCGAGTTGTGTTCACCATGAATCATCAAGAGCGCTTGGAGATTTGACAGGGATCAAGAAGCACTTCAGTAGGAAACACGGGGAGAAGAAGTGGAAATGTGATAAGTGTTCTAAGAAGTATGCTGTTCAGTCCGATTGGAAGGCTCACTCTAAGACTTGCGGCACCAGGGAGTATAGATGTGACTGTGGCACCCTTTTCTCCAGGAGGGACAGTTTCATAAGACACACAGCATTCTGTGACGCATTAGCAGAAGAGAGCGCCAGAGGCATACCTCCTCCAGCAGCTGCAAATACATTCACAAACCCAACAGTACCAACACCAACACCACCTAGTCTTGTTCCCCATCTCCACCAACAATCAATCCCACGTTTCAACACTAGCAGCAATGTGGAAACCAATCATATTCTGCAATACCCATTTTCTCCATCCCTGAAAAAGGAACAGCAGCAGCAGCAGTCGGCTTATAGTAACATTATTAATAATATTGATAGCAGTGGGGGTAATTTTGGAATGCTGAGACCACCTACAGGAGCAGGAGCTTGTGCAGAGTTGCCACCATGGATAGCCAGCTGTCCATCATCAGGCCTACTACTAGGCTCGGGCCCACCACACAATAATCTCTCCTCTTCTTCATCATCATCACCATCCATTTTGTCCACTGGTACTACTACTGCTGCAGCGGAAGCAAAAGGAGTAAGCCCTAACCCTAGCCAGTTGGGACCCACAACCCTCACTCTACCAAACTTTCATCCGGCGTCTGTCCCACACATGTCAGCCACTGCGTTGCTCCAGAAAGCTGCTCAGATGGGCTCTTCCACCTCCTCCACCGCCACCACAAAAACCGCCGGCCACCCCACCACTACTGGGTCCCGTCAGATTCACGTGTCCACTACAGGAGCTAATTTGGATTTCAATTTCTCCTCGTCGTCACGGGTTCATCAACAACATATGGTTGGTGGTGGCAACTTTTTCCAGGAGATGATGATGAACTACTCAATGGGGGGTGCTACTACTACTGCTGGCGGGTTTGAGGAGGATGATGATGAGTATGACGGCATCGCTTCCTTTGAAGATGCATTGGGTGGCTCCAAATCAGCAGCGGGACTTGGAGATGGAGGGTCAGGAGGAGGAGGACGAAGCGAAGGAATGACGAGGGATTTCTTGGGTTTGAGGCCATTAATGTCGCATACTGATTTACTGAGCTTGGCAGGCTTTGGTCACTGCATCAACGATGATGCCGCTGACCAGCGACAGCAGCATAATAGTCATAGTCAAGAGTCTCTAAAACCTTGGCAAGGGTAA
Protein Sequence:
- >Lus10004840|Linum_usitatissimum|C2H2|Lus10004840
MSNLTTSASGTEASVSSSGHHPPPDISSSAQQPPLKKKRNMPGNPDPDSEVISLSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKDEVVRRKVYVCPEPSCVHHESSRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFIRHTAFCDALAEESARGIPPPAAANTFTNPTVPTPTPPSLVPHLHQQSIPRFNTSSNVETNHILQYPFSPSLKKEQQQQQSAYSNIINNIDSSGGNFGMLRPPTGAGACAELPPWIASCPSSGLLLGSGPPHNNLSSSSSSSPSILSTGTTTAAAEAKGVSPNPSQLGPTTLTLPNFHPASVPHMSATALLQKAAQMGSSTSSTATTKTAGHPTTTGSRQIHVSTTGANLDFNFSSSSRVHQQHMVGGGNFFQEMMMNYSMGGATTTAGGFEEDDDEYDGIASFEDALGGSKSAAGLGDGGSGGGGRSEGMTRDFLGLRPLMSHTDLLSLAGFGHCINDDAADQRQQHNSHSQESLKPWQG*