Information report for LPERR04G12000.1
Gene Details
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Functional Annotation
- Refseq: XP_015636930.1 — uncharacterized protein LOC4336084
- TrEMBL: A0A0D9W5X3 — A0A0D9W5X3_9ORYZ; Uncharacterized protein
- STRING: LPERR04G12000.1 — (Leersia perrieri)
- GO:0046872 — Molecular Function — metal ion binding
- GO:0051117 — Molecular Function — ATPase binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Hordeum vulgare: MLOC_78196.1
- Musa acuminata: GSMUA_Achr6P03610_001
- Panicum virgatum: Pavir.J160900.1.p, Pavir.7KG193500.1.p, Pavir.9KG469000.1.p
- Prunus persica: Prupe.5G079100.1.p
- Setaria italica: Seita.7G127600.1.p
- Setaria viridis: Sevir.7G135600.1.p
- Triticum aestivum: Traes_2BL_41EDFCA77.1
Sequences
CDS Sequence:
- >LPERR04G12000.1|Leersia_perrieri|C2H2|LPERR04G12000.1
ATGAGCTCCTCCAACGGCAACGGCGACAAGAAGCCGGCGTCCGGCGGGCGCGGGGGCCCCACCATCCGCACCCTCGCGGACATCAGCCGCGGCACGTCCGGTTTCCCCGGGGGCGGTGGCGGCGGCGGCGGGGGCGGGGGAGGCAGCGACTCCGACGAGCCCCAGGAGTACTACACCGGCGGCGAGAAGAGTGGGATGCTTGTTCAAGACCCAACAAGAAGAAACACCGTGGACTCAATCTTTGAACAAGCTAGACAGATGGGTGCTCTCCAAGATCAGCCACCTCCTTTTGAGGATCAATCTTCCAGCTCTAGAAGCTTTACAGGGACTGGTCGACTTCTTTCAGGAGAGACAACACCGGCTGCACCTCCACCACCTGAGAATGTACTTCACAATATACAATTCTGGAACAATGGATTCACTGTAGATGATGGTCCACTGAGGGACTATTATGATCCTGCAAATGCTGAATTCATTGAGAGCATCAGGCTGTCCCAGTGCCCCAGGGAGTTGGAACCAGCTGATAAACGAACACCTGTTCATGTGAATGTCATCAAACGACAGGAAGACTACCAGGCACCTGTAAAACCTCCATCGCCCTTCCAGGGTGTTGGAAGAACCCTTGGTGCTGGATCTTCTGCAGAAGAGAACTCAGCACCAGCACCAGCTCCTGCTACTCAAGAACCTCGCAGGTCCGTTGGCATAGTGGTGGACGACTCCCTGCCGCGTACATCCATACAGCTAAGGTTGGCCGATGGCACTCGCATGGTTGCCCGTTTCAACATGCACCACACCGTGGGGGACATCAGGTCTTTCATCGATGCCTCCCGGCCTGGGGCTTCAAGGCCATATCAGCTGCAAACTGGTTTCCCGCCGAAGCAGCTTGCTGATCCAGCGCAGACCGTTGAGGAAGCTGTCCAGGTCCGGTATGGAGGAAAGGAAACACGATCCCTAGCCTCCACTTCCATGTTCACGCCGCCGTTCTCCCACCTCCGCCGCCGCCCCCTCGCCGCGATCCCTAACCTCCTCTTCCTCCGGCCGTCGCACCCTCTCTCTACCTCAACCTCGCCGGCGACAACCCGCGCCCCAACCACCCCGGTGGCCGTCCTCTGGGACCTAGCCGCCTCCCGGCCCCCATCCACCCTCCCCCTCTACGACGCCGCCGTACGGCTCAACCTCGCCGCCACCTCCTTCGGCCGCGTCCGCCTCTCCGCCGCCTTCGTCCACCCCGGCCACCGCCTCCCCGCCCCGTCTCCGTCCGCCGCCACCGTCCACCTCTGCCGCGTCTGCGGCCGCCGATTCCGCGCCCGCGACACGCTGCTGCGCCACTTCGACGCGATCCACGCGCGGGAGCACGCCAAGCGCCTCGCGCGGATCGACTCCTCCCGCGGCGACCGCCGCGTGCGCCTCGCCGCCGCGCTGTCGCTCAAGCTCTCCAAGTACGAGAAGGCCGCCCGCGAGCTCGTCGCCGCATCCGCCGCCGACCCGTGCTCCCCTACCGACGACCTCCGCCGGGCTCGCGTCGCCGTCGAGATCTCCCGGAACCCGTCCGACTCCCTCCTCGAGCGCGCCCACCACGTGCTCGACGAAGGGTCTACCGGGTGCCTGATGCTGGTATCGGGCCGCGACGAGGTCGCTCCCCTGCTGCGCCTCGCGAGGGAGAAGGGCGTACGGTCGGTGGTCGTCGGCGGGGAGTCTGGGCCGGCGAGGTGGGCCGACGTGGGGTTCAGCTGGGCGGAGGTGATCGCCGGAAAAGCCAGGAAGGCGGCGCCGTCTGTTTCCGGCAAGTGGCGTGACAGGGACGTGCTCAAGAGGCTGGAGTGGAGGTACGAAGGCGACGACGAGGACGAACAGGTGGTGTTCGAGGAGGACGGCGACGAAGATGGGATTGATGAATTGGCTAGGAAGATCGATGGGAAGCCATGGTGGAAGCTGGAATCGGATGGCGAGGACTCGAGCATTTGCCGTTGA
Protein Sequence:
- >LPERR04G12000.1|Leersia_perrieri|C2H2|LPERR04G12000.1
MSSSNGNGDKKPASGGRGGPTIRTLADISRGTSGFPGGGGGGGGGGGGSDSDEPQEYYTGGEKSGMLVQDPTRRNTVDSIFEQARQMGALQDQPPPFEDQSSSSRSFTGTGRLLSGETTPAAPPPPENVLHNIQFWNNGFTVDDGPLRDYYDPANAEFIESIRLSQCPRELEPADKRTPVHVNVIKRQEDYQAPVKPPSPFQGVGRTLGAGSSAEENSAPAPAPATQEPRRSVGIVVDDSLPRTSIQLRLADGTRMVARFNMHHTVGDIRSFIDASRPGASRPYQLQTGFPPKQLADPAQTVEEAVQVRYGGKETRSLASTSMFTPPFSHLRRRPLAAIPNLLFLRPSHPLSTSTSPATTRAPTTPVAVLWDLAASRPPSTLPLYDAAVRLNLAATSFGRVRLSAAFVHPGHRLPAPSPSAATVHLCRVCGRRFRARDTLLRHFDAIHAREHAKRLARIDSSRGDRRVRLAAALSLKLSKYEKAARELVAASAADPCSPTDDLRRARVAVEISRNPSDSLLERAHHVLDEGSTGCLMLVSGRDEVAPLLRLAREKGVRSVVVGGESGPARWADVGFSWAEVIAGKARKAAPSVSGKWRDRDVLKRLEWRYEGDDEDEQVVFEEDGDEDGIDELARKIDGKPWWKLESDGEDSSICR