Information report for KN538692.1_FGP040
Gene Details
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Functional Annotation
- Refseq: XP_015650380.1 — uncharacterized protein LOC4345880 isoform X1
- TrEMBL: B8BBU6 — B8BBU6_ORYSI; Uncharacterized protein
- STRING: OS08T0485700-01 — (Oryza sativa)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >KN538692.1_FGP040|Oryza_longistaminata|C2H2|KN538692.1_FGP040
ATGGCCACGGAGGAGGAGCTAATGGGCTTCATCTCTAGCCTCGCGGGTCAGTGGGTGAACAAGAGGATGCGGAGGAAGTTAGTTGATGCGTCCTTCTTCGGGGATCACCTCCCCAGCGGGTGGAGGCTGCAGCTTGGGATCAAGCGGAAGGACCGCAAGGCCTGGGTGAACTGCTTCAGTTATGTGAGCCCCAAGGGACAGAGTTTTGCTACTTGCCAAGAGGTTTCTGCATACCTCATGTCACTTCTTGGGTATCCGGAGTTCAAAACGGATAATATTGAGTATGGTAGCACACAACAACATGGCTTGTGTGCTGATGATGGTGTTAATGTTTTAGGTGTTCAACACCAAATTGGTACAAGTATGGACAGTCAAAGTAATTTGCCAGTTGCTTCTGCTACTTTTTATAGTCATTCAAGAGATCAAGACGAAACGGTTGCAGATGATATAAATTCTTATGAATGTCAACAATGCAATTCAACTTTTCATGGTCAGAGTGCCTATGCGCATCACCTGATCACTTTTCACAAAGTGAGTTCTAAGAGGCGTAAGAGTAACAAGGTTAGCAAATTTGGTGAGCCAGTGATAGGCAAAGATGGGAAATTTGAATGCCCAGTATGTAATAAGACGTTTGAGGAACAGTCACGGTACTTTGGTCACATTGGATCCCATGCAAAGTATCAGGGGCTGACTCCTGAAGCATTCCTACAAACCTTGTCAGGAAAGGTTGGTAACGATTCTTTTGCAGGTTTGTCATGTAGCCTTCAAGATTTGGTCGGATCACCACAACTGAATGAGAAGACTACTGCTAATGAAGCACGATCACAGCATCACAATTGTTCAACTAAACATGGAGGCAATAGTACAAGAGGTATAGACCTTTTTAACTCAAATCATCCTGCTAACTTCAATGGGCATAATCAAACTTGGTGTAGATCTGATGAAATTCCTCCCACCACAGAAGCTCAAAGCACATGGACTTATAGAAATAATGAGATGAACTGTGCTGATAGAACTGTTCCGAGAACAGGACCTCAGCCCAATGATCACATGGATTGCAGGGTTAGTGGCTTTGCTGAAGCAACTAATTTTAACGATCAAGCAGGAAGACACCAAGGTTTTAGACCTTCCTCCTTTGGAACTACCAACCATTGTCAAGGCCAGATAATTGATCATGCAGTAGCTGCTTCCAAGCATGCTGAGGTTAATAATAGTATGAAATCAAGAGACGTCAACCTCAATTCACGCCTGAACACAATATCCTTTCCTATTGCAACTGCAAACAATGAAACATCGACTGCCCTTAATGACATGAATCGGTCATGCATTACTGGAAAAGGTTTTAGTGGAAGTTTCAGTAACAATGATGGTGCTGCATCTATCGTGTTGCCCAGTTCTGGATTAAACAATAAAATTTCTAGCTCCCTCGGTGTAGCTGACAGATCATCTATTGCTGCCAGATCCTTCAATGCTGGTTATGTTTATGAAAATGGCGCTTCTGAAGCTAACAATATTGGCAACAAAAACAATACCATGGTGTATCAGACAAGTTTGGCCATGCGCCCAGTCTCTCCTCTGGATTGGAGAACTCCTAAAGCTGAAGGCCACGATGGGATTGGAGAACTCCTAAATCTTGTTCACACAGGGTACCTCAGTACTCTTTTCAAACACAGTCATTTTTTTAGCCATTGGATCTCCCTTCAAGATTCGTGCACCCTCAACGTGATCCAGTCCAAGCAATCGCATGTTGCCAAAAATGCCCAGCCCAAGCAGCGGAGTTCTGAACCGGAGGCAAGCAACAAAAAGACCACAACGATTCACAAGTTTTTTAAATTTATGCATGTGTTCCTCAGGTCTGTTGTCGTACCATCTCCTCCACCGTGCATCCTTAGCCCGACGCCGATGCCACTGCCACCTGCCCTCCCCTCCTCACCAAGGGGGGTCTCCGTTGATCTAGTGAGCCTCTCACGGCTTGCCGACCCGTACGACGCGGAGCTCGGGAAGCGGACTGCCAGGATGACCACGGAGGAGGAGCTGATGGGCTTCATCTCTAGCCTCGCGGGTCAGTGGGTGAGCCAGAGGATGCGGAGGAAGTTAGTTGATGCGTCCTTCTTCGGGGATCACCTCCCCAGCGGGTGGAGGCTGCAGCTTGGGATCAAGCGGAAGGACCGCAAGGCCTGGGTGAACTGCTTCAGTTATGTGAGCCCCAAGGGACAGAGTTTTGCTACTTGCCAAGAGGTTTCTGCATACCTCATGTCACTTCTTGGGTATCCGGAGTTCAAAACGGATAATATTGAGTATGGTAGCACACAACAACATGGCTTGTGTGCTGATGATGGTGTTAATGTTTTAGGTGTTCAACACCAAATTGGTACAGGTATGGACAGTCAAAGTATTTTGCCAGTTGCTTCTATTACCTTTTCTAGTCATTCAAGAGATCAAGACGAAACAGATGCAGATGATATAAATTCTTATGAATGTCAACAATGCAATTCAACTTTTCATGGTCAGAGTGCCTATGCGCATCACCTGATCACTTTTCACAAAGTGAGTTCTAAGAGGCGTAAGAGTAACAAGGTTAGCAAATTTGGTGAGCCAGTGATAGGCAAAGATGGGAAATTTGAATGCCCAGTATGTAATAAGACGTTTGAGGAACAGTCACGGTACTTTGGTCACATTGGATCCCATGCAAAGTATCAGGGGCTGACTCCTGAAGCATTCCTACAAACCTTGTCAGGAAAGGTTGGTAACGATTCTTTTGCAGGTTTGTCATGTAGCCTTCAAGATTTGGTCGGATCACCACAACTGAATGAGAAGACTACTGCTAATGAAGCACGATCACAGCATCACAATTGTTCAACTAAACATGGAGGCAATAGTACAAGAGGTATAGACCTTTTTAACTCAAATCATCCTGCTAACTTCAATGGGCATAATCAAACTTGGTGTAGATCTGATGAAATTCCTCCCACCACAGAAGCTCAAAGCACATGGACTTATAGAAATAATGAGATGAACTGTGCTGATAGAACTGTTCCGAGAACAGGACCTCAGCCCAATGATCACATGGATTGCAGGGTTAGTGGCTTTGCTGAAGCAACTAATTTTAACGATCAAGCAGGAAGACACCAAGGTTTTAGACCTTCCTCCTTTGGAACTACCAACCATTGTCAAGGCCAGATAATTGATCATGCAGTAGCTGCTTCCAAGCATGCTGAGGTTAATAATAGTATGAAATCAAGAGACGTCAACCTCAATTCACGCCTGAACACAATATCCTTTCCTATTGCAACTGCAAACAATGAAACATCGACTGCCCTTAATGACATGAATCGGTCATGCATTACTGGAAAAGGTTTTAGTGGAAGTTTCAGTAACAATGATGGTGCTGCATCTATCGTGTTGCCCAGTTCTGGATTAAACAATAAAATTTCTAGCTCCCTCGGTGTAGCTGACAGATCATCTATTGCTGCCAGATCCTTCAATGCTGGTTATGTTTATGAAAATGGCGCTTCTGAAGCTAACAATATTGGCAACAAAAACAATACCATGGTGTATCAGACAAGTTTGGCCATGCGCCCAGTCTCTCCTTGTGATCTGCAACTTGGATTTAGTGGTCAGAAGCAGCAGATATTGCCTGGTTATGGAGAACTTAGACCAGCTGCGTCTGGGTCCCCTCAGCTTGGGGGCATGGCAGCAAACAGTTCAATTCCCACCAGACCCTCTCAGCCGCAGTTTGGGAGTATGGCCAGAACTGATGCTTTGCCTACTGGACCCTCTCAACCAGGGAGCTTGGCCAGACCTAATTTTGTGCCCACAGGATTTTCTCAGTTTGCAAGCAGGCCACCTACTTCTGTACCACCAGCCGATTCCTCTCAGTTTGCGGGGGGCATGGCCAGGCAAAACATTCCGACCACGTCTGAACCAACTCTAGTATTGGGCTATACTCCTCAGATGGTCAATGGCCCTCCAGCCCAGCTAGGATGGGATCTATCTTTGTCAAGGATGGTCAGTGAAGGCATGCTCCCAGTGTTATGCATATGGTGCAACAGCCAATTCCACCATTTTGGCCCCATTGATGCACAGCAATCTGGTTCGTTTGGTTTCATTTGCCCAGCTTGCAAGGAGAAGATGTCAGGCAATCCTAATGCGCCCAATAACGGTCCATGGCAACCATGA
Protein Sequence:
- >KN538692.1_FGP040|Oryza_longistaminata|C2H2|KN538692.1_FGP040
MATEEELMGFISSLAGQWVNKRMRRKLVDASFFGDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYGSTQQHGLCADDGVNVLGVQHQIGTSMDSQSNLPVASATFYSHSRDQDETVADDINSYECQQCNSTFHGQSAYAHHLITFHKVSSKRRKSNKVSKFGEPVIGKDGKFECPVCNKTFEEQSRYFGHIGSHAKYQGLTPEAFLQTLSGKVGNDSFAGLSCSLQDLVGSPQLNEKTTANEARSQHHNCSTKHGGNSTRGIDLFNSNHPANFNGHNQTWCRSDEIPPTTEAQSTWTYRNNEMNCADRTVPRTGPQPNDHMDCRVSGFAEATNFNDQAGRHQGFRPSSFGTTNHCQGQIIDHAVAASKHAEVNNSMKSRDVNLNSRLNTISFPIATANNETSTALNDMNRSCITGKGFSGSFSNNDGAASIVLPSSGLNNKISSSLGVADRSSIAARSFNAGYVYENGASEANNIGNKNNTMVYQTSLAMRPVSPLDWRTPKAEGHDGIGELLNLVHTGYLSTLFKHSHFFSHWISLQDSCTLNVIQSKQSHVAKNAQPKQRSSEPEASNKKTTTIHKFFKFMHVFLRSVVVPSPPPCILSPTPMPLPPALPSSPRGVSVDLVSLSRLADPYDAELGKRTARMTTEEELMGFISSLAGQWVSQRMRRKLVDASFFGDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYGSTQQHGLCADDGVNVLGVQHQIGTGMDSQSILPVASITFSSHSRDQDETDADDINSYECQQCNSTFHGQSAYAHHLITFHKVSSKRRKSNKVSKFGEPVIGKDGKFECPVCNKTFEEQSRYFGHIGSHAKYQGLTPEAFLQTLSGKVGNDSFAGLSCSLQDLVGSPQLNEKTTANEARSQHHNCSTKHGGNSTRGIDLFNSNHPANFNGHNQTWCRSDEIPPTTEAQSTWTYRNNEMNCADRTVPRTGPQPNDHMDCRVSGFAEATNFNDQAGRHQGFRPSSFGTTNHCQGQIIDHAVAASKHAEVNNSMKSRDVNLNSRLNTISFPIATANNETSTALNDMNRSCITGKGFSGSFSNNDGAASIVLPSSGLNNKISSSLGVADRSSIAARSFNAGYVYENGASEANNIGNKNNTMVYQTSLAMRPVSPCDLQLGFSGQKQQILPGYGELRPAASGSPQLGGMAANSSIPTRPSQPQFGSMARTDALPTGPSQPGSLARPNFVPTGFSQFASRPPTSVPPADSSQFAGGMARQNIPTTSEPTLVLGYTPQMVNGPPAQLGWDLSLSRMVSEGMLPVLCIWCNSQFHHFGPIDAQQSGSFGFICPACKEKMSGNPNAPNNGPWQP