Information report for KHN18341.1
Gene Details
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Functional Annotation
- Refseq: NP_001304591.2 — zinc finger protein ZAT4
- Refseq: XP_006600570.1 — uncharacterized LOC102666705 isoform X1
- Refseq: XP_014624884.1 — uncharacterized LOC102666705 isoform X1
- Refseq: XP_028209465.1 — uncharacterized protein LOC114392503
- Refseq: XP_028209466.1 — uncharacterized protein LOC114392503
- Refseq: XP_028209467.1 — uncharacterized protein LOC114392503
- TrEMBL: A0A445G3M8 — A0A445G3M8_GLYSO; Zinc finger protein ZAT4 isoform A
- TrEMBL: K7MKG4 — K7MKG4_SOYBN; Uncharacterized protein
- STRING: GLYMA17G08480.3 — (Glycine max)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_01636
- Cicer arietinum: XP_004508691.1
- Citrullus lanatus: Cla018577
- Cucumis sativus: Cucsa.113100.1
- Glycine max: Glyma.17G076900.2.p, Glyma.17G076900.1.p, Glyma.05G022700.1.p
- Juglans regia: WALNUT_00018461-RA
- Manihot esculenta: Manes.14G084100.1.p, Manes.06G087200.1.p
- Prunus persica: Prupe.5G201400.1.p
- Pyrus bretschneideri: Pbr030110.1, Pbr007236.1
- Ricinus communis: 30138.m004008
- Ziziphus jujuba: XP_015883385.1
Sequences
CDS Sequence:
- >KHN18341.1|Glycine_soja|C2H2|KHN18341.1
ATGGAAGGAGATCACCATCGAATTCAAGAATTGAAACACGCGTGCAAGTTCTGCGGCAAGTGCTTCCCCTGTGGCAGATCCTTGGGGGGTCACATGAGGTCTCACATCACCAACTTGTCGTCTGAGATGATGAATGAAAAAAAAGAAAAGCTTTCATCTTCTCTCAACAATGGTGGAGACAAAGATTCTGAAGCTGCTGCTGCAACTAACGCTGCTGCAAGCTATGGTCTCAGAGAGAACCCAAAGAAGACTTGGAGAATCTCAGATTATTCAAGTGAAGACCCTTTGGTGTTTGACAAGTTCTGCAAAGAGTGTGGCAAAGGGTTTCACTCTTGGAAGGCCTTGTTTGGCCACATGAAATGCCATTCAGAGAAAGAGAGAGTTTCCAACAGCTTGGAAGATCAAGATTCTTGGACTAATAGTGCTAAGATGGTTATGGATAGCCAATCTGATAATGAAGCAACTGCTCCAAATAAGAGAAGAAGGTCCAAGAGAAGAACAAGGTACACGGTGGTTGCTTCTTCTGCAGCAGCAGCAACAACTTCTTCTGTTGTGTCTTTTGCGAATCCTTCATCTTCTTCTCTCTCTGAGGTTGAGCAAGAGCAAGAAGAGGTTGCTATGAGCTTGATGATGCTTAGTAGGGATGTGAGTCCTTGGAGTGGTCGTCATTCTGTGGCTGAGTCCTCTGACAATAACTCTGCTTATTTCGAAGCTCGATCTTCGGTTCGAACTAATTTGGTCACCAAATTTGATTGCAGCAACAAGAACTTCCCTCCTAAAACAGCAAAAGTGACCAAGCAAAGTGACAACAAGTGGGAGGTTGGCAATTCGGAAAATCCCAACTCAATCAGGGGGACGAGTTCACAACTTTTGACTACTATTGCTGCTAGTGATAATATTACTACTGAGATTCCTGAAAATGGATTTAGAGTGAACAAAAGTAGAGTTTCCAATAAAGGGTATGAAAGAGCCAAGTCTGAGCTTGAGTATGTGTCTGCATTGGAGGATTCTGAAGGTGAACATGGGAGGAGCAGAGTCAATGGAACAGAATCAGTTTTATCAAAGTCGGTTACTACTACTGGCAATAAGTACAGTTCAATCAAGACAAAGTTTTCTGGTTCTGAAATGAAGTCAAATAAGAACTTGGTGGACAAGGCTTCAGAAGCTGAATCTAGCAAGAACTCTAACAAGAGAGGCAAGTTTGAGTGTACCACTTGCAACAAAATTTTCCACTCATACCAAGCACTTGGAGGCCATAGAGCTAGCCACAAGAAGATCAAAGGATGCTTTGCTTCAACGAATGAGAGCAGTGAGAACAGCATTGAAACTGATCCCTCTCCTGACCCAATAGCAACTGAAAACAAGCTCATGAAGAACAGTGATAGTGAGTATCTGGTGGAACATCAACATGGTGCTAGTCTACATAATGAGGGGGAAACAGTTAATGAGTCCAAGAAGAGCAAGGGACACCATGAGTGCCCAATTTGCTTCAAGGTTTTTCCTTCTGGCCAAGCCTTGGGTGGCCATAAGAGATCTCATATGGTTGGTGGGTCTGAGAGTAGAAACTTTCAAACAATTGTGCCTCAGGAACCAGTGGCAGAAATTAGGGACTTCCTTGATCTTAATCTTCCTGCTTCTACTGAGGAAGAAAGCTATAGCCATGCTGACTCTAACAGTAACAGACCCTGGTGGATAGTAGAAGACAACCACAAACAGGAGGCACTGGTAGGCCTTATCTCATAG
Protein Sequence:
- >KHN18341.1|Glycine_soja|C2H2|KHN18341.1
MEGDHHRIQELKHACKFCGKCFPCGRSLGGHMRSHITNLSSEMMNEKKEKLSSSLNNGGDKDSEAAAATNAAASYGLRENPKKTWRISDYSSEDPLVFDKFCKECGKGFHSWKALFGHMKCHSEKERVSNSLEDQDSWTNSAKMVMDSQSDNEATAPNKRRRSKRRTRYTVVASSAAAATTSSVVSFANPSSSSLSEVEQEQEEVAMSLMMLSRDVSPWSGRHSVAESSDNNSAYFEARSSVRTNLVTKFDCSNKNFPPKTAKVTKQSDNKWEVGNSENPNSIRGTSSQLLTTIAASDNITTEIPENGFRVNKSRVSNKGYERAKSELEYVSALEDSEGEHGRSRVNGTESVLSKSVTTTGNKYSSIKTKFSGSEMKSNKNLVDKASEAESSKNSNKRGKFECTTCNKIFHSYQALGGHRASHKKIKGCFASTNESSENSIETDPSPDPIATENKLMKNSDSEYLVEHQHGASLHNEGETVNESKKSKGHHECPICFKVFPSGQALGGHKRSHMVGGSESRNFQTIVPQEPVAEIRDFLDLNLPASTEEESYSHADSNSNRPWWIVEDNHKQEALVGLIS