Information report for KHN17151.1
Gene Details
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Functional Annotation
- Refseq: XP_006589417.1 — probable lysine-specific demethylase ELF6
- Refseq: XP_028182376.1 — probable lysine-specific demethylase ELF6
- Swissprot: Q6BDA0 — ELF6_ARATH; Probable lysine-specific demethylase ELF6
- TrEMBL: A0A445IQE6 — A0A445IQE6_GLYSO; Putative lysine-specific demethylase ELF6 isoform B
- STRING: GLYMA10G35350.1 — (Glycine max)
- GO:0009741 — Biological Process — response to brassinosteroid
- GO:0009826 — Biological Process — unidimensional cell growth
- GO:0032259 — Biological Process — methylation
- GO:0033169 — Biological Process — histone H3-K9 demethylation
- GO:0040010 — Biological Process — positive regulation of growth rate
- GO:0045815 — Biological Process — positive regulation of gene expression, epigenetic
- GO:0048577 — Biological Process — negative regulation of short-day photoperiodism, flowering
- GO:0048579 — Biological Process — negative regulation of long-day photoperiodism, flowering
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0005634 — Cellular Component — nucleus
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0008168 — Molecular Function — methyltransferase activity
- GO:0016491 — Molecular Function — oxidoreductase activity
- GO:0046872 — Molecular Function — metal ion binding
- GO:0071558 — Molecular Function — histone demethylase activity (H3-K27 specific)
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004496256.1
- Glycine max: Glyma.10G209600.1.p, Glyma.10G209600, Glyma.10G209600.2.p, Glyma.20G181000.1.p, Glyma.20G181000
- Juglans regia: WALNUT_00007284-RA, Jr07_34620
- Lotus japonicus: Lj0g3v0106299.1
- Medicago truncatula: Medtr1g094740.1, Medtr1g094740
- Prunus persica: Prupe.2G211400.1.p, PRUPE_2G211400, Prupe.2G211400.2.p
Sequences
CDS Sequence:
- >KHN17151.1|Glycine_soja|C2H2|KHN17151.1
ATGGGTAGTGTTGAAATCCCCAATTGGCTGAAAGGGTTGCCCCTGGCTCCGGAATTTCGCCCTACAGACACTGAATTTGCCGACCCAATTGCTTATATTTCGAAGATTGAGAAGGAAGCTGCCAACTTTGGGATTTGTAAGATTATCCCACCGTTTCCCAAACCTTCAAAAAAATACGTTTTTTCCAATTTGAATAGGTCACTCTTGAAGTGCCCTGATTTTGGTCCAGATAATAGTTCATTAGGTGTTTGTAATTCATCGAAAACCAGTTCTGGGGATGGTAGTAGTGACGGGGTGTTGCGAGCCGTGTTTACTACAAGGCATCAAGAACTGGGGCAGAGTCAGAGTGTGAAAAAAGCCAAAGGGACAGTTCAGAATCCACTGTCAGGTGTTCATAAGCAAGTATGGCAAAGTGGGGAGGCTTATACTCTGGAGCAGTTTGAGTCTAAATCGAAGTCTTTTGCGAAAAGTGTGCTAGGATCGGTGAAGGATGTTTCTCCTCTGGTTATAGAGTCTATGTTTTGGAAGGCAACTTTAGAGAAGCCTATATATGTAGAGTATGCAAATGACGTTCCTGGGTCTGCTTTTGAAGAGTCCAAGGGTCAATTTCATTATAGTCATAGAAGGCAAAGGAAAAGGACTTATTATAAGAGTAGGCTAGATAGCTCTGATTGTAAACAAACTGAAACGGGTTGCGTAAGAGATACCCAAACCGATGAGACCAAGGTTGCTTCTGTCCAAAGTCATTCGGACACATGTTTGCAGATGGCCAAATCAAGTACAACTGTGTCAACATTTTCATCAAATGATGATTCACAATCTTCTAAGGAAAAGAGTTCAGATGCCAGCAATGAAATGCAAGGCACTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAACTTGCAAGTTATTGCACGCTCGTCTGGCTCACTAACACGTTTTATGCCTGATGATATTCCTGGTGTCACGTCACCTATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAGCTTCACAGCATGAATTTTCTTCACACTGGCTCATCAAAGACCTGGTATGCTGTTCCTGGAGATTATGCCTTTGCTTTTGAGGAAGTCATCCGCACTGAGGGTTATAGTGGTAACATTGATCACTTAGCTGCTTTGAAACTTTTGGGTGAGAAAACGACTCTTTTATCACCTGAGGTAATTGTTGCATCTGGGATTCCTTGTTGCAGGTTAACTCAGCACCCTGGTGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAGGATTCAGCCATGGTCTTTCTGCAATTTGTGCTACAGAGATCTGTTTGACATGTGGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTTAGAGTAGCTAAGGAAGCTGCAGTACGCAGAGCTGCAATGAACTATCTTCCCATGCTTTCCCATCAGCAACTGCTTTACTTACTGACCATGTCTTTTATTTCAAGAGTGCCAAGAACACTATTACCTGGCGTGCGTAGTTCTCGTCTAAGAGACCGTCAGAAAGAAGAGAGGGAGTTTTTAGTAAAACAGGCTTTTATAGAAGACATGCTGCAGGAAAACAAGCTTCTATCCATTCTTCTTGGGAAGGAAGCAACTAAAAAAGCTGTTTTATGGAATGCTGATTTACTGCCTGATTCCAGCAAAGATTTTCAGTTGCCTGATTTAACTTCTACTACTGGATCCTCTATGGCACATATGTCAAATATTAGTTCTGCAGAAAAGAGTGGTCATTATCTGCTTGATGAAATGAGTTTGTATATGGAGAATTTGACTAATTTAGATCTTGGTGGTGATGATCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGCTTGTGTGGGTTGTGGAATCCTTGGTTTTCCATTTATGACTGTGATACAACCAACCGAGAAATTGATAATGGAACTTCTTCCTGATAATCATCTAGTTCAAGTTTCCTCTCCAGACTCTACTGCTTGCGTTCATAGTTCCATCTCAAGGGATCTTTCTGTTTCCGAACTTTCATCAGTAAAGGAGTTGCCAGATCAATCATTAAACAAGTGCAATAAATGTTGGAACACCTCCAGTAAGTTTTTGAGGCCTCGGATTTTCTGCCTGGAGCATGCTGTTCAAATATTTGAGATGTTGCAGAGCAAAGGTGGAGCCAATGTGCTTATAATTTGCCATTCAGACTACCAGAAAATAAAGGCACATGCCAGGGCAGTTGCGGAAGAGATACATAGTGCTTTTGATTATAATGAGGTTCCATTAGATACTGCATCCCCAGAAAATTTGACTTTGATAGATCTGGCAATTGATGGTGAAGAACATGATGAATGTGAAGACTGGACATCTAAACTAGGCATTAACCTACGGAATTGTGTCCATGCAAGAAATAACTCTCCATCTAAACAAGTTCCTTGGATACTAGGGACGCTGTTGTATGATAAATGCCTTGCTTCAAAATCTTTAGCTTTAAATTGGCAATCACGGAGATCTCGATCAAAAAGGTCAAGTTGTTTGGCTCAGACTAAACCGTGTGACAGTATTGAGAGAAAGAAGGAGGATCGGTTTTATGGAAGAATAGATGACTCCCCTGCTGAAAAGAAGCTACTTCAATATTCAAGAAGGAAGTTCAAGTCAAAGCAAAGGTGTTTCCCTGTAGCAAGCATGGTCAGTGAATTCCAAGAGAAGTCCAAAAATTTGTCAGCTACTTTGAATGGGGATCATAATAATTGTTTTTCTAAAACTGATCTTGAAGCTAAGAATTTCAGGAGTGATTATGCATTGTCATGTGTCTCTGCTTCTACCAAAATGTCTCCAATACATCCTGAAATCCAGATTGCTGAAATGCCTGCTAGCACGAGATTAAACGATGCTAAACCGCAACCTTCCAATTCCATTCCTGATCATACTTTAATGACTGAAGAAGTTGGAGCAGAGATTGAGAAGCAAACCATACAGGAATCAGATGTAGACAGAAATAATGATTTAACACTCGGTCATTCTAAGATGCATTGCAATACCAGTGTCTCAGAAATATGTGGCAAGGAGAGCCAAGGTTGTCAGGACAAGAAATGTTCTAGCTCACTTACAAATGCAACTGATAGAAATATTGAAATGATTAGAATTTCTGAAATTACAGAAGCAATTATCATCGATAGCAGGTGTAATAGCTTAATTTTGAATGGTGAAGGGCATCAAGAATATCAGTCTACCTGCAAAAGCAACAATGAGGAAGCTGCTTTATCACCTGCTTCATTGGTAAATCAATCTACCCTGGCATCTGTGGTTGGAAGTTTTGGAAGTCCAAATAATAATTATACTGCAGAAAAAATTAGCAGTCCTATTTTCCTAGAAAAGACAACTGAGGAAGAAATTGATTCTTTAAGCGAAAGGGACAAGGAACCTCTAATTGATGACAGACCAATTAGCGAACATACTCTAAAAGAAGTTTGTGAAGTTCAAAGAGAGCTTTATGCTTCTGCAGACTTGCATAATACCATAGTCTTGGATTATGAGATGCAACATGAAACTCAGGGTGGAAAAGATAGCAGAAAAGAAATAAATCAGTCAACTCTTGTTTCAACAATTACAAGAGGGGAATATGCTGAAGGGTTGAATGATGAAGTGATTCCAAAGTCTGTGGAGCAGTGCCAGATTGAAAATATGAATAAAATTAATGTGGAACCTGTTTCTAGCTATGTTGCAAAAGGTGAAAATAAATGTGTAACTTCATCAGAATTAGGATGTTCTGAAGTTTTAGTGGAAACCTATCCTAAAGACTCCTGTATTCAATTGATTTCAGATAAAGAAAAAGAAACGGAAATCCAGTCAGTGAGTATAATTGATGAGGAATTTTGCTCTGGCACAGATACATCGATAGATGACTCTTCATCAATCCAGGAATGTTCTAAAATTGAGAAAGAGAGCTGTGTTACAGAAAACATAAATGGAATCAAAGCCAATTTGTCAAAAGATAATAGGGAGCTGGAAAGCTGCGAGTTGACTACAGCAGTTCCCAGATCAAATGCCAGGAAGAATAAAAAGAGAAAAGTGAAAAATACAACGAAGAATCAATCCAATATTGACAACTTTATTAGAAGTCCGTGTGAGGGGTTGAGGCCAAGAGCTGGGAAGATTGCCACTGACAAAAGTGGGGTGGAAATCAACCAAGTTGACAAGGAAAATCAGGTGGCTAAAAGGGCAAGGAGATCTTCTGAAGGTTTGGTTCCTCACAAAAATAAAAAGGATGATGTTAAAAAGCCCCATAAGTGTGACCTTGATGGTTGCCAAATGAGTTTCAAGACTAAGGCTGAGTTACTACTGCATAAACGAAACCTTTGCCCACATGAAGGGTGTGGTAAGAAGTTCAGCTCCCACAAATATGCTTTACTTCACCAGCGTGTTCATGATGATGAGAGGCCCCTTAAGTGCCCATGGAAAGGTTGTTCCATGTCATTCAAGTGGGCTTGGGCAAGGACAGAGCATATTCGCGTACATACTGGGGAGAAGCCTTATCACTGCAAGGTCGAGGGATGTGGCCTTTCTTTCAGGTTTGTATCAGATTTTAGCAGGCACAGACGGAAAACGGGGCACCATGTGAAACCTCCTGCTTGA
Protein Sequence:
- >KHN17151.1|Glycine_soja|C2H2|KHN17151.1
MGSVEIPNWLKGLPLAPEFRPTDTEFADPIAYISKIEKEAANFGICKIIPPFPKPSKKYVFSNLNRSLLKCPDFGPDNSSLGVCNSSKTSSGDGSSDGVLRAVFTTRHQELGQSQSVKKAKGTVQNPLSGVHKQVWQSGEAYTLEQFESKSKSFAKSVLGSVKDVSPLVIESMFWKATLEKPIYVEYANDVPGSAFEESKGQFHYSHRRQRKRTYYKSRLDSSDCKQTETGCVRDTQTDETKVASVQSHSDTCLQMAKSSTTVSTFSSNDDSQSSKEKSSDASNEMQGTAGWKLSNSPWNLQVIARSSGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHTGSSKTWYAVPGDYAFAFEEVIRTEGYSGNIDHLAALKLLGEKTTLLSPEVIVASGIPCCRLTQHPGEFVVTFPRAYHVGFSHGLSAICATEICLTCGFNCGEAANFGTPQWLRVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRTLLPGVRSSRLRDRQKEEREFLVKQAFIEDMLQENKLLSILLGKEATKKAVLWNADLLPDSSKDFQLPDLTSTTGSSMAHMSNISSAEKSGHYLLDEMSLYMENLTNLDLGGDDLPCHFQTDSGALACVGCGILGFPFMTVIQPTEKLIMELLPDNHLVQVSSPDSTACVHSSISRDLSVSELSSVKELPDQSLNKCNKCWNTSSKFLRPRIFCLEHAVQIFEMLQSKGGANVLIICHSDYQKIKAHARAVAEEIHSAFDYNEVPLDTASPENLTLIDLAIDGEEHDECEDWTSKLGINLRNCVHARNNSPSKQVPWILGTLLYDKCLASKSLALNWQSRRSRSKRSSCLAQTKPCDSIERKKEDRFYGRIDDSPAEKKLLQYSRRKFKSKQRCFPVASMVSEFQEKSKNLSATLNGDHNNCFSKTDLEAKNFRSDYALSCVSASTKMSPIHPEIQIAEMPASTRLNDAKPQPSNSIPDHTLMTEEVGAEIEKQTIQESDVDRNNDLTLGHSKMHCNTSVSEICGKESQGCQDKKCSSSLTNATDRNIEMIRISEITEAIIIDSRCNSLILNGEGHQEYQSTCKSNNEEAALSPASLVNQSTLASVVGSFGSPNNNYTAEKISSPIFLEKTTEEEIDSLSERDKEPLIDDRPISEHTLKEVCEVQRELYASADLHNTIVLDYEMQHETQGGKDSRKEINQSTLVSTITRGEYAEGLNDEVIPKSVEQCQIENMNKINVEPVSSYVAKGENKCVTSSELGCSEVLVETYPKDSCIQLISDKEKETEIQSVSIIDEEFCSGTDTSIDDSSSIQECSKIEKESCVTENINGIKANLSKDNRELESCELTTAVPRSNARKNKKRKVKNTTKNQSNIDNFIRSPCEGLRPRAGKIATDKSGVEINQVDKENQVAKRARRSSEGLVPHKNKKDDVKKPHKCDLDGCQMSFKTKAELLLHKRNLCPHEGCGKKFSSHKYALLHQRVHDDERPLKCPWKGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDFSRHRRKTGHHVKPPA