Information report for KHN11473.1
Gene Details
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Functional Annotation
- Refseq: XP_003555867.1 — protein indeterminate-domain 5, chloroplastic
- Refseq: XP_006605876.1 — protein indeterminate-domain 5, chloroplastic
- Refseq: XP_006605877.1 — protein indeterminate-domain 5, chloroplastic
- Refseq: XP_028220097.1 — protein indeterminate-domain 5, chloroplastic-like
- Refseq: XP_028220098.1 — protein indeterminate-domain 5, chloroplastic-like
- Refseq: XP_028220099.1 — protein indeterminate-domain 5, chloroplastic-like
- Swissprot: Q9ZUL3 — IDD5_ARATH; Protein indeterminate-domain 5, chloroplastic
- TrEMBL: K7N2T9 — K7N2T9_SOYBN; Uncharacterized protein
- STRING: GLYMA20G24366.2 — (Glycine max)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_08105
- Glycine max: Glyma.20G109400.4.p, Glyma.20G109400.3.p, Glyma.20G109400.2.p, Glyma.20G109400.1.p, Glyma.10G280000.1.p, Glyma.07G158200.1.p
- Lotus japonicus: Lj5g3v2241010.1
- Populus trichocarpa: Potri.010G099200.6, Potri.010G099200.5, Potri.010G099200.4, Potri.010G099200.3, Potri.010G099200.2, Potri.010G099200.1, Potri.008G142400.5, Potri.008G142400.4, Potri.008G142400.3, Potri.008G142400.2, Potri.008G142400.1
Sequences
CDS Sequence:
- >KHN11473.1|Glycine_soja|C2H2|KHN11473.1
ATGGCGGCATCATCTTCCTCAGCGTCGCTCTTTGGATTTAGAGAAGAGGATCAGAATCAGATGAAGCAACAACATTCCCTGACACCATCTTCATCAACAACACCAGCTGCACCCCCACCCCAGAAGAAAAAGAGAAACCAACCTGGAACACCATATCCAGATGCGGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATATGTGAGGTGTGCAACAAAGGGTTCCAAAGAGAGCAAAACCTACAGCTACACAGAAGAGGACACAACCTGCCTTGGAAGCTTAAGCAGAAGACTACAAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGCGTTCACCATGACCCTTCAAGGGCTCTTGGAGACCTCACAGGGATTAAGAAACACTACTCTCGCAAACACGGTGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAGTATGCTGTTCAATCTGATTGGAAAGCCCATTCTAAGACTTGTGGCACCAGAGAATATAGATGTGACTGTGGCACCCTCTTCTCCAGGCGTGACAGTTTCATCACCCACAGGGCCTTCTGCGATGCACTGGCTCAAGAGAGTGCAAGACAGCCACCTAGCCTTAGCGGCGGAGGAATTGGCAGTCATCTGTACGGAAGCACCACCAACATGGCCTTAAACCTATCTCAGGTCGGTTCTCAAATCTCAACCATGCAAGACCCTAACGCCCAGCCCACCGAGCTCCTCCGCCTCGGCGCCACCTCCGGTCGAACCGGCCATTTCGACCACATCCTCGGTTCACCCTTCAGACCCTCCAACCAACAACAACAACCCTTCTTCATGTCCGAACAACCCAACCAAACCTACCACCACCCCGACCAAAACAAACCCTTCCAACAAGGGTTAATGCAGTTGTCTGATCACCTTAACAACAACAGCCACCACAATAATTCACCCTTCAGCCTTCCCTTTCTCTCCAACAACACAAGCAACGCTTCGTTCTCTGAACACTTCAACAATGCCAATGGAGGAGGAGGCAACAACAACAACAACAACAACGAGGGCACTAACTACTTCGCAACTTCAAGTGCACCTTCTCTCTTCAGCAACAGTGTCAATGCCAGTGCCTTATCTCACATGTCCGCAACTGCACTGCTTCAGAAAGCAGCACAAATGGGTGCAACTTCGAGCAACGGCACCGCTTCGCTTTTGAAAAGCTTCGGAAGCGCGTCCTCCAGCAGCGGCGGCGGCTCGAAACTGGTGAATGCTGCAAACTACGTCAGTGGCATGTTCGGAGGGAATAATCACGTGAACGAACAGAGTAACAGTAACCTCCAAGACCTGATGAACTCGTTCGCTGTTGGTGGAAACTCTTCCATTTTCGAAGATGGGTTTGAAGCATATGAACATAGTAACAATAACAGTAATAGGGACCCAAAAGTGCACGCAATGAGTGGAAGTAGCAGCAGCATTGGAGGGTCTGATAGGCTCACCCGCGATTTTCTGGGTGTTGGTCAGATAGTGAGGGGAATGAGTGGGAGTGGAGGAGTTGCGCAGAGAGAACAACAGCAGCAACATGGCTTCAACTTGAGTTCTTTGGAGGCAGAAAGATATAATAATAATAGCAATAATGCTGCGCCGTCATCAGGGCAAGCTTTTGGAGGTGGTGGAGGGAATTTTCAGTGA
Protein Sequence:
- >KHN11473.1|Glycine_soja|C2H2|KHN11473.1
MAASSSSASLFGFREEDQNQMKQQHSLTPSSSTTPAAPPPQKKKRNQPGTPYPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPSLSGGGIGSHLYGSTTNMALNLSQVGSQISTMQDPNAQPTELLRLGATSGRTGHFDHILGSPFRPSNQQQQPFFMSEQPNQTYHHPDQNKPFQQGLMQLSDHLNNNSHHNNSPFSLPFLSNNTSNASFSEHFNNANGGGGNNNNNNNEGTNYFATSSAPSLFSNSVNASALSHMSATALLQKAAQMGATSSNGTASLLKSFGSASSSSGGGSKLVNAANYVSGMFGGNNHVNEQSNSNLQDLMNSFAVGGNSSIFEDGFEAYEHSNNNSNRDPKVHAMSGSSSSIGGSDRLTRDFLGVGQIVRGMSGSGGVAQREQQQQHGFNLSSLEAERYNNNSNNAAPSSGQAFGGGGGNFQ