Information report for KHN09491.1
Gene Details
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Functional Annotation
- Refseq: XP_028225828.1 — zinc finger protein JACKDAW-like
- Refseq: XP_028225830.1 — zinc finger protein JACKDAW-like
- Swissprot: Q700D2 — IDD10_ARATH; Zinc finger protein JACKDAW
- TrEMBL: A0A445LE53 — A0A445LE53_GLYSO; Zinc finger protein JACKDAW
- STRING: GLYMA03G33700.1 — (Glycine max)
- GO:0010075 — Biological Process — regulation of meristem growth
- GO:0045604 — Biological Process — regulation of epidermal cell differentiation
- GO:0048364 — Biological Process — root development
- GO:0051302 — Biological Process — regulation of cell division
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0042803 — Molecular Function — protein homodimerization activity
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_09819, C.cajan_37595
- Glycine max: Glyma.03G179700.2.p, Glyma.03G179700.1.p, Glyma.19G180400.1.p, Glyma.19G180400.2.p, Glyma.13G139000.2.p, Glyma.13G139000.1.p, Glyma.10G051500.4.p, Glyma.10G051500.3.p, Glyma.10G051500.2.p, Glyma.10G051500.1.p
- Juglans regia: WALNUT_00017188-RA
- Lotus japonicus: Lj5g3v0626740.1, Lj0g3v0300749.1
- Manihot esculenta: Manes.08G005700.1.p, Manes.09G069600.1.p
- Populus trichocarpa: Potri.006G129300.1
Sequences
CDS Sequence:
- >KHN09491.1|Glycine_soja|C2H2|KHN09491.1
ATGCAAATGATACCCGGAGACCCCTTTTCACTATCCACTTCCCTCCCAGCAGGGCTTCCCAATGAACAAAGCACAAACACAAACCCTAATCCTAATCCTCCACCACCCAACAAAAAGAAGAGAAATCTACCAGGAACACCAGATCCAGATGCCGAGGTTATTGCTCTTTCGCCAAAGACTCTCATGGCCACAAACCGTTTCATCTGTGAAATATGCAACAAAGGGTTTCAGAGAGACCAGAACCTTCAGCTTCATAGAAGAGGTCACAACCTTCCATGGAAGCTACGACAGAGATCAAACAAGGAGGTTCGGAAGAAGGTATATATCTGTCCAGAGAAAACCTGTGTCCACCACGACGCGGCAAGGGCTCTCGGTGATCTCACCGGAATAAAGAAGCATTACAGCAGAAAACACGGTGAGAAGAAGTGGAAGTGTGAAAAGTGCTCCAAAAAATACGCAGTTCAATCTGATTGGAAGGCTCACACCAAAACCTGTGGCACCAGAGAGTATAAGTGCGACTGTGGCAACCTCTTCTCCAGGAAGGACAGTTTTATTACTCACAGGGCCTTCTGCGATGCCTTAGCTGACGAGAGTTCGAGACTCACCTCAGTTGCTTCAACAAGCCTAAATTTTAAGAACGAAGATGCAACTATGATCAACACACAAGCTAGTTTGTCGACACGTGGATTAATCACTGGCCATGGAATGCAAAATGTTTCACAATTTGGTCCACATGGGTTTCGTTTAATGAACATGGGCACAGACCAGCAAAGACCAAACTTGTCACTATGGTTGAACCAAGGAAATCACCACATTAACAATCCACTTGATGTGGCATTATCATCAAGCTCTTCTGGTTTGCCTGAGGTTGTGCACATGGCACAAGCTAATATTAATAATAATGCCTTAATTGGTTCTTCTTCAGTGTTCTCCAATTTTGGAATGCCTGCTTCTTCAAATTCATCTAATCCAAACCTAATGGGGAAAAAAGGAGATGGTGGAGCTTCAGATTTGGCATCAATGTATTCTGAGAGTCAAAACAAGAATTCAAACTCAACTTCTCCAATGTCAGCCACTGCTCTTTTGCAGAAAGCAGCACAGATGGGTTCCACCAGAAGCACCAACCCTTCAATTTTCAGTGGCAGTTTTGGAGTAATGAGCTCATCTTCCACACAAAGCACTAGTCTCAACAGCAATATTGCAAACCAAAGCTGTGACCAACTTAACCAAGCCTTTCAGAATTTTAATGCGACAAGCAGTAGTAGTGCAACTATGCTGGGAAGTTCTACTAACTTTAGCTCATTGACGCATTCATCAAACGGTTTTGACCAGTTTATGATGCAAAACAAGGTGGAACCAACTCAGTTGAAGCTCCACCATCCTGGCTCAAACTCAGTGGAACATAACTTGACAAGAGATTTTCTTGGCGTGAGTGGAAATGGAGGTGGACATGTACATCATGCATTTCTACCCCAAGAGCTGGCAAAGTTTGCTTCCTTAGGCTCATCAATGGGGTTGAATCAGTTCACTGTAGGCCATCAATGA
Protein Sequence:
- >KHN09491.1|Glycine_soja|C2H2|KHN09491.1
MQMIPGDPFSLSTSLPAGLPNEQSTNTNPNPNPPPPNKKKRNLPGTPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVRKKVYICPEKTCVHHDAARALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGNLFSRKDSFITHRAFCDALADESSRLTSVASTSLNFKNEDATMINTQASLSTRGLITGHGMQNVSQFGPHGFRLMNMGTDQQRPNLSLWLNQGNHHINNPLDVALSSSSSGLPEVVHMAQANINNNALIGSSSVFSNFGMPASSNSSNPNLMGKKGDGGASDLASMYSESQNKNSNSTSPMSATALLQKAAQMGSTRSTNPSIFSGSFGVMSSSSTQSTSLNSNIANQSCDQLNQAFQNFNATSSSSATMLGSSTNFSSLTHSSNGFDQFMMQNKVEPTQLKLHHPGSNSVEHNLTRDFLGVSGNGGGHVHHAFLPQELAKFASLGSSMGLNQFTVGHQ