Information report for KHM99037.1
Gene Details
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Functional Annotation
- Refseq: XP_006605451.1 — protein indeterminate-domain 5, chloroplastic
- Refseq: XP_006605452.1 — protein indeterminate-domain 5, chloroplastic
- Refseq: XP_028222360.1 — protein indeterminate-domain 5, chloroplastic-like
- Refseq: XP_028222361.1 — protein indeterminate-domain 5, chloroplastic-like
- Swissprot: Q8GYC1 — IDD4_ARATH; Protein indeterminate-domain 4, chloroplastic
- Swissprot: Q9ZUL3 — IDD5_ARATH; Protein indeterminate-domain 5, chloroplastic
- TrEMBL: A0A0B2NUV5 — A0A0B2NUV5_GLYSO; Protein indeterminate-domain 4, chloroplastic isoform B
- TrEMBL: I1NCZ9 — I1NCZ9_SOYBN; Uncharacterized protein
- STRING: GLYMA20G00840.1 — (Glycine max)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_37122
- Cicer arietinum: XP_004498205.1, XP_004498204.1
- Glycine max: Glyma.20G005800.1.p, Glyma.07G158000.1.p, Glyma.07G158000.2.p, Glyma.20G184000.4.p, Glyma.20G184000.3.p, Glyma.20G184000.2.p, Glyma.20G184000.1.p, Glyma.10G206600.2.p, Glyma.10G206600.1.p
- Lotus japonicus: Lj0g3v0315789.1, Lj5g3v1793480.3, Lj5g3v1793480.2, Lj5g3v1793480.1
- Ziziphus jujuba: XP_015894322.1
Sequences
CDS Sequence:
- >KHM99037.1|Glycine_soja|C2H2|KHM99037.1
ATGGCTTCTGCTTCCTCATCCACACCCTTCTTGGGAATCAGACAAGAAAATCAAAGTCACGTTACACAACAGCAACAACACCAATCCTCTACTACTGCTGCTTCCTCTACTACTACTACTAGTGCTACTCCAACCACAGTGCCTCAAAAGAAAAGGAGGAATCAACCCGGAACACCATATCCAGATGCTGAGGTGATAGCACTATCTCCAAAGACTCTAATGGCAACAAACAGGTTTATATGTGAAGTGTGCAATAAAGGGTTCCAAAGAGAGCAAAACCTACAGCTACACAGAAGAGGACACAACTTGCCTTGGAAGCTAAAGCAAAAGACCAACAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCCGAGCCCACATGTGTTCACCATGACCCTTCAAGGGCTCTTGGAGACCTCACTGGCATTAAGAAACACTACTCTCGCAAACATGGTGAGAAGAAGTGGAAGTGTGAAAAGTGCTCCAAGAAATATGCTGTTCAATCAGATTGGAAGGCACATTCTAAAACCTGTGGCACTAGAGAGTATAGATGTGACTGTGGCACCCTCTTCTCCAGGCGTGACAGTTTCATAACTCATAGGGCATTTTGTGATGCTCTAGCACATGACAGTGCAAGACACCCTTCAAGCCTGAACCCTTTGGGAACTCATCATTTGTATGGCACAAACCACATGAGCCTAGGCCTTAGTGCTCAGCTTCAGAACCACCAAGCAGCTACTAACAGCATATTGAGCCTTGGAAGTGCACCAAAGTTTGAGCACTTAATCTCACCAAATCTGCACCACTCACCATCATCATTTGGAGTGCAATCACCACCACCACCACCCCAGTCATCATCATTCTTCATGACTGATCCAAACCAAGCATTTCAAGACCTCCAATCTCAGAACCAAGGACACTTATTCTCAAACAAGCAACTTCATGGTCTCATGCAACTCCCTGATCTTCAAGGAACCACCAATATCAATTCCACTACTTCTGCTTCATCAGTGTCTGGTTCAGCTAACAACACCAATCTCTTCAACCTAAGCTTCTTCCCTAACACCAACGCCAGTGGAAGCATAATCAATGATCAATTCAGCAACATGACTGGAGTTACTAATAATAACCAAGGAACAGCAACACTCTACAGTACTAATAGCCCTGTGAATAGTAACCAAGTTGGTTTGTCTTCACTCTTTGGAAACTCATCAGTGCAACAAGATAACATGTCCCCTCACATGTCAGCCACTGCTTTGCTTCAGAAAGCTGCACAAATGGGTTCAACCACAACCACCAATGAGTTAGGTATGAGATCAAGCATGGAGGATGATGAGCACAGCAACCATCTACGTGGGTTGATGAACTCTTTTGTCAATGGAAACAACCTTGGTCAGTTTCACAACGTGGTGGAGGAGCCTAAGAAGATGCCACAAAACAACAACCTTGGTTTGTGCTTTGGAGGGTCTGATAAGTTGACCTTGGACTTTTTGGGTGTTGGGGGAATGGTGAGGAACATGAACAATGGTGGAGGGTTTTCACAAAGAGAGCAACAACAACAACAACACTCCATGGGAATTACTATGAGCCCCTTGGATCCTAAATTGGAATCAGCGAAAGCAAACCAACACTATGGAACCTCAACACTCTAA
Protein Sequence:
- >KHM99037.1|Glycine_soja|C2H2|KHM99037.1
MASASSSTPFLGIRQENQSHVTQQQQHQSSTTAASSTTTTSATPTTVPQKKRRNQPGTPYPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAHDSARHPSSLNPLGTHHLYGTNHMSLGLSAQLQNHQAATNSILSLGSAPKFEHLISPNLHHSPSSFGVQSPPPPPQSSSFFMTDPNQAFQDLQSQNQGHLFSNKQLHGLMQLPDLQGTTNINSTTSASSVSGSANNTNLFNLSFFPNTNASGSIINDQFSNMTGVTNNNQGTATLYSTNSPVNSNQVGLSSLFGNSSVQQDNMSPHMSATALLQKAAQMGSTTTTNELGMRSSMEDDEHSNHLRGLMNSFVNGNNLGQFHNVVEEPKKMPQNNNLGLCFGGSDKLTLDFLGVGGMVRNMNNGGGFSQREQQQQQHSMGITMSPLDPKLESAKANQHYGTSTL