Information report for IGS.gm_8_00455
Gene Details
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Functional Annotation
- Refseq: XP_005848564.1 — hypothetical protein CHLNCDRAFT_145127
- TrEMBL: E1ZCM9 — E1ZCM9_CHLVA; Uncharacterized protein
- STRING: XP_005848564.1 — (Chlorella variabilis)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >IGS.gm_8_00455|Chlorella_variabilis_NC64A|C2H2|IGS.gm_8_00455
ATGCACCAGGCGCAGTTTGCTGGCCGGGGTCCTGCCGCTGGCCAACGTCAGGCGGCTTCAGCGCCGCCAGAGCTGGAGCAGGCGCAGCAGGCGCGTCCCGTCCCGCAGCCGCGCCGTCGTGAGCGGCCCCCTCGCCCACAGCAGCAGCAGCAGCAGCAGCAGCGTGGTGCTGGCAGCCTGCTGCGACCATTAGAGGCAGCTGCCAGCGGCGCTGCCAACGATCGCCAGCGGCGGCAGCAGGCAGCGCCAGTTGCAGGCGGGGAGCCCTCGTCATCATCAGATGCAGAAGGTGCGGGCACCCAGCTGGGTGGCCAGGCACAGCCGCAGCAACAAGCAGCAGCAGCAGGAGGACTGGAGGCAGCAGCGAATACAGCTGCCCAGCCGCGCCAGGAGCCCCGCAGTAGGCAGCGCCAGGAGCGGCAGGCGGGGGAGCGGGGCGCCGATGCCGCCGGCGATGCAGCAGCCTTGGATAGCAGTGGTGCTGCTGGCCCCCAGCCTCCGGAGCCCTTGCCAGATGCGCCGCACTGCCTTGTGTGCTGCCACGAGATGGCAGAGGTTGGGATTGGCGCCTGCAACCACAAGCAGGTGTGCGGTACGTGCACCCTGCGCCTGCGCCTCTGCTACGATCGCCAGGACTGCCCGCTGTGCAAGGCTGAGCTCAAGGAGGTCATCATCGCTCCCTGGCGCCCGCAGCTCCCCGACTGGCAGGCCTTTGAGCAGCACCCAGAGTGGTTGGCGCGCAGCGCCAAGTGGGCGCACGGCAGCATCTGGGCGGACAGGTGGCGCCGCGGCGGCCGCCTCAGCTCCCGCCTCCTGCACGACCTGCAGCGCCGCACCGCGCTGGCCTGCGCCGTGTGCGACCCGGGCGGCGAGGCGCCCTTGGCGCGGCGCGAGCACCTGCTGGTGCACGTGCAGGAGGCGCACGGCCTGCGCCTGTGCAGCCTCTGCCTGCAGGAGGGGCGCCTGTTCCCTCTGGAGCTGCAGGCCTTCCCCAGCCTGCAGGCGCTGCAGGCGCACAGCGAGGCCGCCCACCCGCACTGCGGCTTCTGCCGCCGCACCTTCTATGATGACGATGCGCTGTGGAAGCACATGCACCAGGCTCACTTCTCCTGCCACGTGTGCCCGCCCCCCGTCGCCGCCCACGCCTACTTCAACAGAGCCCCCGACCTGCTGCGCCACATGAGGCACGCTGGCAGGGCTGCGCCTGCGCCTGTGGCTGTGGCTGCGCCTGCGCCTGCGCCTGCGCCTGCGCTCCCTTGCGGAGCGTCTGAGCACTTCATGTGTGATGAGCCCGAGTGCGCCGACTGCTTTGTGGCCTTTGCCACCGCGGATGAGCTGAGGAGGCACCAGCTGGAGCGGCACTCGGCCCGCATGCCGCGCTGGGACTCCAGCCGCGCCCGCCCGCTGCAGCTCGACATCTCCTTTGCCCGCCGCCAGGGCCCGCTGTCGGCGGCCGAGGCGACGGCGGAGCGGCGGCGTCAGCGCCAGCGCAGCCGCGGGCCGCAGGACGTACGCATGATGGAGGGTGCGCGCCCCGGGGAGGGCCCGCCACCCGACCAGTGGCCCGCTGGCTTTGAGTATGCCCGGGAGGCAGACGGAGGCCTGCGGGTGATTGACGACGCAGATGTGCCGGCAGCAGCGTACCCTGGCGGCGGCGGCGGCGGCGGCAGCGGCAGTGGTGGCGGCTTGATGGGCGCCGGCAGCTGGGCGGAGCACCGCCCGCAGCGGCAGCAGCGGGGCGGCGGCGACTTCCCCTCGCTGTCGGCCGCAGCGGCAGGAGAGGGCGGCGGGGGCGGCGGCGCCGGCAGCAGCAGGCCGCCGCCGCTCGTCAAGAAGACGGTGAAGTGCCCCTGTGGCAGGCGCGTGAGCCACTATGCTGTGGCTGAAGGGCAGGAGGTGCCACCCCTGGAGTGTGACGCGGTGTGCCGCATTGAGGGGCGGCGCCAGCAGCTGGCGGATGCATTTGGCATGGACGACCCGGCCCACCATGCCGGCGCCTTTGAGCGGCAGAGGTCTGTCACCTACAGCGGGCTGCTGCTGGCGGCGGCGCAGCAGAACCCGCGGTTCGTGGAGGGCGTGGAGCGACAGCTGGCGGAGTTTGTGGCGGACAAGGAGGCCAAGAGGGTGAGCCTGTCTGCGATGCCGCGCGAGCAGCGCGCCGTGGTGCACGCCCTGGCGGAGCAGTATGGGCTGGCCACCACCGGGTATGGGCAGGAGCCTGCGCGGTATGTGGAGCTGTTCAAGACGCCCGCCGCCGGCATCCCCGCGCGCCTGCTGTCCAGAGTGGCGCCCACGGTCCCTGCCTCAGAGGTGGCCCAGCTGCTGAGGGAGAGCGAGGGCCACCCCATGCGCCTGATGGACATAGCCATGTCTGTTGACCTGCGCTTCTACCTGCGGCAGTGGGAGGGAGCCTACCGCCTGGAGTGGCAGGGGGGCGATGCCGCCATCGTGCGGTTCGAGCGCGAGCAGGACCTGAAGGAGGCGCTGGATGTGTTGGGTGGCGGCATCCGCGGCCTGTTCAGGATTGACCGCTCCTGGCGCCCCAAGACTGCGGTGGCGACGGCGCCGCCTGTGCCCAGCAGCAGCGCCAGCAGCCGAGGGTGGGCAGGCGCCGAGGCGGGTGGCAACGCGCCTGAGGGCTCCACTTGGACCGCGGTGGCAGTGGCGCCACGGCCTGCGCACAACAGGCCGGATGCGCAGCAAGCGGCAGCGGCAGCCAGCGGTACAGAGCAGCAGCAGGAGCATCGGTGGGCGGTGATGACGGGCCGACGGGCGGCGCGCCCGGCAGCAGCGGCAGCCGCCGCGGCTGGTGCGGGCAGGAACGTGCTGGTGGAGATGGTGCAGGAGCACGAGGATGCCTGGACCAGCGACGGCAGCTCGGAGGAGAGCGACGGGTAG
Protein Sequence:
- >IGS.gm_8_00455|Chlorella_variabilis_NC64A|C2H2|IGS.gm_8_00455
MHQAQFAGRGPAAGQRQAASAPPELEQAQQARPVPQPRRRERPPRPQQQQQQQQRGAGSLLRPLEAAASGAANDRQRRQQAAPVAGGEPSSSSDAEGAGTQLGGQAQPQQQAAAAGGLEAAANTAAQPRQEPRSRQRQERQAGERGADAAGDAAALDSSGAAGPQPPEPLPDAPHCLVCCHEMAEVGIGACNHKQVCGTCTLRLRLCYDRQDCPLCKAELKEVIIAPWRPQLPDWQAFEQHPEWLARSAKWAHGSIWADRWRRGGRLSSRLLHDLQRRTALACAVCDPGGEAPLARREHLLVHVQEAHGLRLCSLCLQEGRLFPLELQAFPSLQALQAHSEAAHPHCGFCRRTFYDDDALWKHMHQAHFSCHVCPPPVAAHAYFNRAPDLLRHMRHAGRAAPAPVAVAAPAPAPAPALPCGASEHFMCDEPECADCFVAFATADELRRHQLERHSARMPRWDSSRARPLQLDISFARRQGPLSAAEATAERRRQRQRSRGPQDVRMMEGARPGEGPPPDQWPAGFEYAREADGGLRVIDDADVPAAAYPGGGGGGGSGSGGGLMGAGSWAEHRPQRQQRGGGDFPSLSAAAAGEGGGGGGAGSSRPPPLVKKTVKCPCGRRVSHYAVAEGQEVPPLECDAVCRIEGRRQQLADAFGMDDPAHHAGAFERQRSVTYSGLLLAAAQQNPRFVEGVERQLAEFVADKEAKRVSLSAMPREQRAVVHALAEQYGLATTGYGQEPARYVELFKTPAAGIPARLLSRVAPTVPASEVAQLLRESEGHPMRLMDIAMSVDLRFYLRQWEGAYRLEWQGGDAAIVRFEREQDLKEALDVLGGGIRGLFRIDRSWRPKTAVATAPPVPSSSASSRGWAGAEAGGNAPEGSTWTAVAVAPRPAHNRPDAQQAAAAASGTEQQQEHRWAVMTGRRAARPAAAAAAAAGAGRNVLVEMVQEHEDAWTSDGSSEESDG*