Information report for HL.SW.v1.0.G026687.1
Gene Details
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Functional Annotation
- Refseq: XP_023915570.1 — zinc finger protein ZAT9-like
- TrEMBL: A0A2P5DNE4 — A0A2P5DNE4_PARAD; Zinc finger transcription factor
- STRING: XP_008236445.1 — (Prunus mume)
- GO:0006979 — Biological Process — response to oxidative stress
- GO:0009409 — Biological Process — response to cold
- GO:0009414 — Biological Process — response to water deprivation
- GO:0009611 — Biological Process — response to wounding
- GO:0009644 — Biological Process — response to high light intensity
- GO:0009651 — Biological Process — response to salt stress
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0010117 — Biological Process — photoprotection
- GO:0010200 — Biological Process — response to chitin
- GO:0015979 — Biological Process — photosynthesis
- GO:0035264 — Biological Process — multicellular organism growth
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >HL.SW.v1.0.G026687.1|Humulus_lupulus|C2H2|HL.SW.v1.0.G026687.1
ATGGCCTTAGAAGCTCTCAATTCTCCAACCACGGCTAACCCATTCTCCACCTACAACCAAGACACCGAGACTCTCCAATTCCACGAGCCATGGATCAAGCGCAAGCGCTCCAAGCGCCCACGTCTCGAACAAGACCACCCTTCGCCGCCATCCGAAGAAGAGTACCTTGCTCTCTGCCTAATCATGCTCGCTCGTAGCGGTGGTTCCGCCACCTCTTCCCCGCCTGCCAACTCCTCATCTTCCGCTCAGGGACCCGCTCACGATGGTGGAGCTCATCGCCTACCTCCGCAGCCGCCATCTCTGAAGCTTTCTTACAAGTGCAGCGTATGTAACAAGGCTTTTACTTCTTACCAGGCCCTCGGCGGCCATAAGGCTAGCCACCGTAAATCATCCAACTCCTCCTCTGATGGCGCCGCCACCGCCGCCGCTGATAACGTTTCCACGTCTACTGTTTCTACAACTGTCCCAGCTTCCAGTGGTAGGACACACGAGTGCTCCATCTGCCACAAGACCTTCCCCACCGGACAGGCTTTGGGCGGTCACAAGCGGTGCCACTATGACGGTGGAAGTGGAAATAGTGCCTCTGGGGGTGGCGTTACGTCATCTGAAGGTGCCGCTTCGAGCATGAGCCACAGCCACAGCCATAACCAGAGTCAGATCAGTCAACGGGGTTTCGACCTTAATATGCCGGCTTTGCCGGAATTCTGGCCTGGTTTTACAATTGAAGTGAACAACAAGAAAAGTCAACTTTCCGGCATCGACCAAGAGGTGGAGAGCCCCTTGCCGATGAAGAAACCACGGTTGTCGAATCTGGAAGACTTCGGTCCATGGATCAAGCGCAAGCGCTCCAAGCGCCCACGTCTCGAACAAGACCACCCTTCGCCGCCATCCGAAGAAGAGTACCTTGCTCTCTGCCTAATCATGCTCGCTCGTAGCGGTGGTTCCGCCACCTCTTCCCCGCCTGCCAACTCCTCATCTTCCGCTCAGGGACCCGCTCACGATGGTGGAGCTCATCGCCTACCTCCGCAGCCGCCATCTCTGAAGCTTTCTTACAAGTGCAGCGTATGTAACAAGGCTTTTACTTCTTACCAGGCCCTCGGCGGCCATAAGGCTAGCCACCGTAAATCATCCAACTCCTCCTCTGATGGCGCCGCCACCGCCGCCGCTGATAACGTTTCCACGACTACTGTTTCTACAACTGTCCCAGCTTCCAGTGGTAGGACCCACGAGTGCTCCATCTGCCACAAGACCTTCCCCACCGGACAGGCTTTGGGCGGTCACAAGCGGTGCCACTATGACGGTGGAAGTGGAAATAGTGCCTCTGGGGGTGGCGTTACGTCATCTGAAGGTGCCGCTTCGAGCATGAGCCACAGCCACAGCCATAACCAGAGTCAGATCAGTCAACGGGGTTTCGACCTTAATATGCCGGCTTTGCCGGAATTCTGGCCTGGTTTTACAATTGAAGTGAACAACAAGAAAAGTCAACTTTCCGGCATCGACCAAGAGGTGGAGAGCCCCTTGCCGATGAAGAAACCACGGTTGTCGAATCTGGAAGACTTCGGTGTTTCACGGAACTGA
Protein Sequence:
- >HL.SW.v1.0.G026687.1|Humulus_lupulus|C2H2|HL.SW.v1.0.G026687.1
MALEALNSPTTANPFSTYNQDTETLQFHEPWIKRKRSKRPRLEQDHPSPPSEEEYLALCLIMLARSGGSATSSPPANSSSSAQGPAHDGGAHRLPPQPPSLKLSYKCSVCNKAFTSYQALGGHKASHRKSSNSSSDGAATAAADNVSTSTVSTTVPASSGRTHECSICHKTFPTGQALGGHKRCHYDGGSGNSASGGGVTSSEGAASSMSHSHSHNQSQISQRGFDLNMPALPEFWPGFTIEVNNKKSQLSGIDQEVESPLPMKKPRLSNLEDFGPWIKRKRSKRPRLEQDHPSPPSEEEYLALCLIMLARSGGSATSSPPANSSSSAQGPAHDGGAHRLPPQPPSLKLSYKCSVCNKAFTSYQALGGHKASHRKSSNSSSDGAATAAADNVSTTTVSTTVPASSGRTHECSICHKTFPTGQALGGHKRCHYDGGSGNSASGGGVTSSEGAASSMSHSHSHNQSQISQRGFDLNMPALPEFWPGFTIEVNNKKSQLSGIDQEVESPLPMKKPRLSNLEDFGVSRN*