Information report for GSMUA_Achr6P32950_001
Gene Details
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Functional Annotation
- Refseq: XP_009407121.1 — PREDICTED: protein indeterminate-domain 4, chloroplastic-like
- TrEMBL: M0TC89 — M0TC89_MUSAM; Uncharacterized protein
- STRING: GSMUA_Achr6P32950_001 — (Musa acuminata)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn254561
- Beta vulgaris: Bv7_162330_mjoz.t1
- Cajanus cajan: C.cajan_37595
- Gossypium arboreum: Cotton_A_32868_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G1411, Gh_D09G1416, Gh_D04G1096
- Manihot esculenta: Manes.09G069600.1.p
- Populus trichocarpa: Potri.016G088500.2, Potri.006G129300.2, Potri.006G129300.1
- Prunus mume: XP_008243920.1
- Prunus persica: Prupe.6G238500.1.p
- Salvia miltiorrhiza: SMil_00015526-RA_Salv
- Vitis vinifera: GSVIVT01025658001
Sequences
CDS Sequence:
- >GSMUA_Achr6P32950_001|Musa_acuminata|C2H2|GSMUA_Achr6P32950_001
ATGTGGAGTTCGCTACCATGGATAACGAGAGAAGGTGTTGGTGGTGCAACAGATCCCGATGCAGAGGTGGTGGCGCTGCAGCCGGAGGATCTGCTGGCGACGGGCCGATACATCTGCGAGGTGTGCGGGAAGGGATTCCAGCGGGATCAGAACCTGCAGCTGCACATGCGCACCCACAACATCAACTGGGAGCTCAAGAAGAGCGGCGGCACGCCGGCGCGCCGCAAGGCCTACATCTGCCCCGTGCCAACCTGCGTCTACAATGACAGGTCCCGCGCCCTCAGCGACATCACCGGGATCAAGAAGCACTTCAACAGGAAGCACGGGACCAAGAATCTGATATGCCCTCAGTGCTCCAAGCCCTATGCCGTGGAGGCGGATCTCAAGGCCCACCTGAAGAACCACATCCTGCGCGACCATCAATGCGAGTGCGGCAGTACCTTCTCCAGAAAGAACAGCTACGAGGCGCACCGGGCATTCTGCTGCAAGCTGTTAGAGGAGAGCATGAAGCTGCCTTCTTCGGTCGCCGGAGAGCCGAGCACCAGGGCCGATGTCGACGTCTTTGGCGGCAATTTTGAACTTCCCGACATGAACGAGCAACTGGTCTACACCAACATCGGGTTTACTTCTCCCCAGGAAGCTCCCCTGCGAGTTGAAGCCACGGCAGAGCAGCCGAACGCGGTCTTGAATGATGACCGGGATGCGCCATCAGCTGGGCAGCTGAATCGCTCCGTTGCCATGCTTCCCGATGACCCCGACTTCGTGGCATCTCTCCCAGTGTGCCTAACTCGTCTTCTGAAGTCTCGCTACGATGAGGTCTTGTGTATGTACTCTTCTTCCGGCACTTACGGAGGCATGGCTCAGGTGGCATCACCACCGCTCGCGGCCAATCACTCTTTCTCCAACGCATCTCTCGACGAATTAAGGGAGGAAAATGGTCTGAATGGGAAGTCCTCTACGTTTGATTTCTTCGGTGGGTCATCTTCTTCCTTCATGGATCATGGAGCTCCATCTACAGAGGAATCACAGGGACTAGGACCTCATCTTTCACTATCAAACGTCTGCGCCTATGGTAAGAGGGAACAGAACTCTGTGGCAGCCAACTCTACAGTCTACAATGATTTCCTTAGCTTATCTGAATCTCTCACTCTCTCAGCCTCATTCTTTGACGCAGGGAAGGAGAGCTACTACGCTGGCATCGATGAACCGATGCTTGCAAGCTTGGTTTGCATGAACTCCATTCACCAGCCACATCTAGCCAGTACCTTCACCGAGTCGTCGGCGACGGCGTTGCTGCAGAAGGCAGGGGTGATGAACGCAACCATGAGCATGCCCGCGTCCACATGCTTCCCCGGTCAGGCGATGAGCACGGAGAGTATACTCAACATGGAGCAATTTCAGATCCAGCAGGAGAAGAATTTTCCACCGGGCGACTCTTCGACGTCACATTTCCTGACTCTGACGCCGAATCACCAAACTGATCCGAGGAAGAGTAGCATCCACTCTTATCAGCAACAGGAGAATTGGATCAGCGACCCGAGCAGGAGCGCCTTCCAGCTTTACCAGCACGACAGGAGCACTGCGTCAAACAAACCTGCATCATCTTCCTTCTTCTGCGACGCGGTGAAAAGCATGGACTCCTACTCGAAGCTGAAAGACTTGCAGTGGAGCACACAGGAGAAGGCGCCCACCGACTTCACGGATTTCTTCACGAGTTCCACAGGCAAGAAGCCGACAGAGGAAGACGGCGGCGCCGGGAATGCAGTGCTGGGGTTTCCTGCTGCTGAGCCAATCATGGCACCCTATGCTTTGCCCTCCGAGACTGCGCCGGAAAACAGAGGAACAGAAACAGGATGGAACCGGCGAGTGGAAGCGGTGGCTCCACCGCCATCGTCGTCGATGAACCAGAACGGCGATGGCGTGACCATGGATCTCCTGGGAATGGGAGGAGAAGGGGCGGAGGCCGGAGGATACAGCGAGGACCAGATGGGCTTCTTCTTCGGCAACGGTGGCTATCAAGACAAAGAATGCACACATAAGAAAAGAACCTATGAATTCCTTGAGTACCTGAAGTCACATGGTAAAGAACCATCTTAA
Protein Sequence:
- >GSMUA_Achr6P32950_001|Musa_acuminata|C2H2|GSMUA_Achr6P32950_001
MWSSLPWITREGVGGATDPDAEVVALQPEDLLATGRYICEVCGKGFQRDQNLQLHMRTHNINWELKKSGGTPARRKAYICPVPTCVYNDRSRALSDITGIKKHFNRKHGTKNLICPQCSKPYAVEADLKAHLKNHILRDHQCECGSTFSRKNSYEAHRAFCCKLLEESMKLPSSVAGEPSTRADVDVFGGNFELPDMNEQLVYTNIGFTSPQEAPLRVEATAEQPNAVLNDDRDAPSAGQLNRSVAMLPDDPDFVASLPVCLTRLLKSRYDEVLCMYSSSGTYGGMAQVASPPLAANHSFSNASLDELREENGLNGKSSTFDFFGGSSSSFMDHGAPSTEESQGLGPHLSLSNVCAYGKREQNSVAANSTVYNDFLSLSESLTLSASFFDAGKESYYAGIDEPMLASLVCMNSIHQPHLASTFTESSATALLQKAGVMNATMSMPASTCFPGQAMSTESILNMEQFQIQQEKNFPPGDSSTSHFLTLTPNHQTDPRKSSIHSYQQQENWISDPSRSAFQLYQHDRSTASNKPASSSFFCDAVKSMDSYSKLKDLQWSTQEKAPTDFTDFFTSSTGKKPTEEDGGAGNAVLGFPAAEPIMAPYALPSETAPENRGTETGWNRRVEAVAPPPSSSMNQNGDGVTMDLLGMGGEGAEAGGYSEDQMGFFFGNGGYQDKECTHKKRTYEFLEYLKSHGKEPS