Information report for GSMUA_Achr11P11060_001
Gene Details
|
|
Functional Annotation
- Refseq: XP_009383339.1 — PREDICTED: lysine-specific demethylase REF6-like
- Swissprot: Q5N712 — JM705_ORYSJ; Lysine-specific demethylase JMJ705
- TrEMBL: M0RR86 — M0RR86_MUSAM; Uncharacterized protein
- STRING: GSMUA_Achr11P11060_001 — (Musa acuminata)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >GSMUA_Achr11P11060_001|Musa_acuminata|C2H2|GSMUA_Achr11P11060_001
ATGGCCGCCGCAGCGTCGCCGTCCGCGCCCGGGGTGGCCGCCCCCGAGCCGCTGCCACTGGAGGTGCCCCCCTGGCTCAGGTCGCTGCCGCAGGCTCCGGAGTTCCGCCCCACGCCGCAGGAGTTCCAAGACCCCATCGCCTACATCCTCAAGATCGAGAAGGAAGCCGCCGCCTTCGGCATCTGCAAGATCGTGCCCCCCCTCCCCCCCGCTGCCAAGAAGACCGCCCAGCAGATCGGCTTCTGCCCTCGCCGCCCCCGCCCCGTCCAGAAGTCCGTATGGCAGAGCGGCGAGCACTACACCCTCGCGCAGTTCGAGGCCAAGGCCCGCCAATTCGAGCGCTCCCACCTCCGCCATGCCGCAGCAGGCGGCAGCGCTCGCAAGGCCGCCGCCTCAGCTGCTCTCTCCCCTATTGAAATCGAGACCCTCTTCTGGCGGGCTTCTGCCGACAAGCCCTTCTCGGTCGAGTACGCCAACGACATGCCCGGTTCGGGTTTTGCTCCGCTCCCCAGCGACGGCCGGCACTGCTGGCGTGACAAGGCGCCGGCTAATGTCGGGGAATCAGCGTGGAACATGCGGGGTGTGTCCCGGGCTAAGGGCTCCCTGCTCCAGTTCATGAAGGAGGAAATCCCTGGAGTGACGTCGCCCATGGTGTATGTAGCGATGCTGTTTAGCTGGTTTGCATGGCATGTTGAAGACCACGAGCTGCACAGCTTGAATTACCTGCATATGGGCGCTGGGAAGACGTGGTATGGAGTACCGAGGGATGGTAGACTTGCCTTCGAGGAGGTGGTCCGCATACAAGGCTATGGTGGTGAGGTAAACCCTCTCGGTAAGTCCTTTACTTTTACAATCTTGGGTGAGAAGACCACTGTTATGTCTCCTGAAGTTCTTGTCGGGGAGGGAATACCATGCTGCAGCAGGTTGGTTCAAAATGCTGGGGACTTTGTAGTCACTTTTCCTGGGGCTTATCATATGGGGTTCAGTCATGGGTTTAATTGTGGGGAGGCAGCAAATATCGCTACTCCTGAATGGTTGAGATTTGCTAAAGAGGCTGCAGTTCGAAGGGCTTCAATAAATTATCCTCCTATGGTGTCTCATTTTCAGTTGCTATATGCACTTGCACTATCATTACACACAAGGATGCCCACAGGGGATGGAAGTGAGCCACGAAGTTCTAGATTAAAAGATAAGATGAAAGGAGAAGGAGAAGTGATAGTAAAAAATGCATTTGTTCAAAATGTGATTCAAAATAATCACCTACTTAATATTCTTCTTGATAAGGGAACATCCTGTGTAGTTCTTCCACAAAATGCACCTGATGCATCACGACTTTTACCTTCCAATGATGTGGGGATATGTGACAAATTTGTTGGTGCTGATCAATACTCTTTCTCATCTGATTTACAAAATGTGGAAGGTGAAAAAGAAGGGTCAATTCATGGTGATGGGTTGCTAGATCAAGGACTACTGTCTTGTGTGACATGTGGAATTTTGAGTTTTGCATGTGTTGCGGTCATTCAACCACGAGAGACAGCAGCCAAATATCTCACGGCTGCGGATTGTGGTTTCCTTAATGATCATGCTATTGGTTCAGCAGACGTTAGCGAGTTAAGTAGAGACACAAATTGGAAGCCGAGCAGAAACAATCTGGTTACTGGCATTGTACAAATTGAAAGGAATGTCGAGGATAGAGTGAATGATGACTTAGTTCATTGTGATGCATATTCAGTTCAAGTTTCGGACTGGAGTATCAAAATGATTTCTGATGTTACATGTCCAAGAGCTGCTTCTGCACTTGATCTTTTAGCTTCTGTTTATACTGATTCATCAGATTTTGAGGATGAGGATGTTCCATTAGAGAAGTCTACATGCTCTGATAAAAATAATATGGGAGACTCATCATTAGTGCTTAACACTAATGAACACTTGGGAAATGCAGTTGAAACCCAAATCCTTCATTCGAGTGAGGTTGCACATGAGGAAACAAAATTGCACTTGGCTGGATCAGAGAGCCAAAACGATCTGTTTGCCCAAAGTTCTCAATCAGTTGATGGTTCAGATAATTTAAATGGGGATGACAATGATGATAATGAGGGGATGGAAACATCTAAGACTTCCATAAAGTTTATGGGGAAATCTAGAGATGTTCATCACAAGGAATTTGACTGTGCTGTGCCAGCAGAAGCTGTCACAATATGTCAAGAATTAAGAAATGTTGCTACAAAGAAGAGCCCAAAAATATCAGTTGTGCAAGGATTTGACAAAGATTCTTCTCGAATGCACGTATTCTGTCTTGAGCATGCAGCAGAGGTTGAAAAACAACTTCAGCCAATAGGTGGTGTGCATATGATGATTCTATGTCATCCAGACTATCCTAAAATTGAATCAGAAGCAAAGTTGTTGGCAAAAGAATTGGGAATTGGCAATATTTGGAAGAATGTCAAGTTCAGAGAGGCCAGTAAAGAAGACCAAGAAAGAATCAGAGTGGCCTTAGAGGATGAAGAAGTTATACCCACAAACAGTGATTGGACAGTGAAATTGGGAATCAACCTCTATTATACTGCCAACCTCAGCAAATCTCCCATCTACAGTAAGCAGATGCCATATAATCCAGTTATATACAAAGCTTTTGGCCAAAAATCTGCAGGTGACTCCCCAGAAAAGCCAAAGACAAGTGGGAGGCGCACAGGCAGACAGAAGAAAATTGTTGTTGCTGGCAGGTGGTGTGGAAAGGTTTGGATGACAAACCAGGTCCACCCATGTTTAGCCCATAAAAAGGAAACTCTAGAGCAAGAACCGACAGAAGAATATTATTCATCTGATAGTGATCAGAATCCTTCGGATGAGATAGAGATTGATCATTCCAGCAAAGTTTCCTCGAAAAGTAATTCATCAGGAAGTAATCTGGCAGTAAAAAGTTCTGGGAAGAAAAGGAAAAAGCCTTCGAGAAAGGCAAAGACGAAGAAACCCAGATGCACTATGGCAGACAGCAAATCAAAAGCTACTGATGTATCCGGAACTTCTGCATCTCCACCTGGGAGGACTCCAAGAAGCAGTTGTCCTAGAAACATCGAGAGCACTAAACAGCACAAATTAAATTCGAAAGATGAAGCAGGAGGTCCGAGCTCACGTCTTAGAAAACGACCATCCAAGTCTGTGGAACAAAAGAACAAATTGGCTAACAAGAAGCAGTCTAACAAGAGGAAAGCTAAAAACAACCAAACTGCAAATCTTGTACCCAAGGATGAGGAAGAATATGCTTGTGATATTGAGGGGTGCTCTATGAGCTTTAGCACAAAGCAAGATTTGGCATTACACAAGCGGGACATTTGCCCCGTGAAGGGGTGTGGCAAGAAGTTCTTCTCACACAAGTACCTGTTGCAGCACAGGAAGGTACACATGGATGACCGGCCATTGGAATGCCCATGGAAGGGATGCAAGATGACTTTCAAGTGGCCGTGGGCACGAACTGAACACATAAGGGTACACACTGGTGATCGCCCCTATGTCTGCCAGGAACCAGGATGTGGTCAGACATTCCGCTTTGTATCAGATTTTAGCCGTCACAAGCGCAAAACAGGCCATTCTGTTAAAAAGGGCCGAAGATGA
Protein Sequence:
- >GSMUA_Achr11P11060_001|Musa_acuminata|C2H2|GSMUA_Achr11P11060_001
MAAAASPSAPGVAAPEPLPLEVPPWLRSLPQAPEFRPTPQEFQDPIAYILKIEKEAAAFGICKIVPPLPPAAKKTAQQIGFCPRRPRPVQKSVWQSGEHYTLAQFEAKARQFERSHLRHAAAGGSARKAAASAALSPIEIETLFWRASADKPFSVEYANDMPGSGFAPLPSDGRHCWRDKAPANVGESAWNMRGVSRAKGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHMGAGKTWYGVPRDGRLAFEEVVRIQGYGGEVNPLGKSFTFTILGEKTTVMSPEVLVGEGIPCCSRLVQNAGDFVVTFPGAYHMGFSHGFNCGEAANIATPEWLRFAKEAAVRRASINYPPMVSHFQLLYALALSLHTRMPTGDGSEPRSSRLKDKMKGEGEVIVKNAFVQNVIQNNHLLNILLDKGTSCVVLPQNAPDASRLLPSNDVGICDKFVGADQYSFSSDLQNVEGEKEGSIHGDGLLDQGLLSCVTCGILSFACVAVIQPRETAAKYLTAADCGFLNDHAIGSADVSELSRDTNWKPSRNNLVTGIVQIERNVEDRVNDDLVHCDAYSVQVSDWSIKMISDVTCPRAASALDLLASVYTDSSDFEDEDVPLEKSTCSDKNNMGDSSLVLNTNEHLGNAVETQILHSSEVAHEETKLHLAGSESQNDLFAQSSQSVDGSDNLNGDDNDDNEGMETSKTSIKFMGKSRDVHHKEFDCAVPAEAVTICQELRNVATKKSPKISVVQGFDKDSSRMHVFCLEHAAEVEKQLQPIGGVHMMILCHPDYPKIESEAKLLAKELGIGNIWKNVKFREASKEDQERIRVALEDEEVIPTNSDWTVKLGINLYYTANLSKSPIYSKQMPYNPVIYKAFGQKSAGDSPEKPKTSGRRTGRQKKIVVAGRWCGKVWMTNQVHPCLAHKKETLEQEPTEEYYSSDSDQNPSDEIEIDHSSKVSSKSNSSGSNLAVKSSGKKRKKPSRKAKTKKPRCTMADSKSKATDVSGTSASPPGRTPRSSCPRNIESTKQHKLNSKDEAGGPSSRLRKRPSKSVEQKNKLANKKQSNKRKAKNNQTANLVPKDEEEYACDIEGCSMSFSTKQDLALHKRDICPVKGCGKKFFSHKYLLQHRKVHMDDRPLECPWKGCKMTFKWPWARTEHIRVHTGDRPYVCQEPGCGQTFRFVSDFSRHKRKTGHSVKKGRR