Information report for GSBRNA2T00142469001
Gene Details
|
|
Functional Annotation
- Refseq: XP_013584457.1 — PREDICTED: zinc finger protein ZAT4-like
- Refseq: XP_013584458.1 — PREDICTED: zinc finger protein ZAT4-like
- Refseq: XP_013584459.1 — PREDICTED: zinc finger protein ZAT4-like
- Refseq: XP_013695610.1 — zinc finger protein ZAT4-like
- TrEMBL: A0A0D3CD21 — A0A0D3CD21_BRAOL; Uncharacterized protein
- STRING: Bo5g042720.1 — (Brassica oleracea)
- GO:0071704 — Biological Process — organic substance metabolic process
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0016868 — Molecular Function — intramolecular transferase activity, phosphotransferases
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >GSBRNA2T00142469001|Brassica_napus|C2H2|GSBRNA2T00142469001
ATGCGACACCATCGTGGTGGAGCTGACGAGATCTTCAGTCATGGAGCTATGATTGCGAGGCGGAGCAACCGACGATCCCTCACGACGAGACCGAATCCGTGTCGGCAGAGAAGATTAGCATCAACACCCGCAATGTTTAGTTGTACATTGACTGAAGATGAGTCATTCTTGTGCCCTGCTGATGGGGCTATCATGATAACATGTATTCTTATTGATCTCGGTTTCTATAATAAGTACAGCAAGCCATCTTCCTTACAACAGGAACAGTCCGCTGCTGTGGATTCATCTGGCCGTGAGTTCAACCGTAATCGTCTTATTGCGTTGCTTTCAGCAATTGTTCTAGAGCAAATCCGTGTTTCGGGCTTTGGTGGATGGTTTCTTCTCAGACTTTCTCTCCACGACCCTGTTCTTCCTCTTAACATTGAGACTAATACAATGCGTGTAATGCTTTCACTCTTTCTTAAGCACAATCCGCCTAGACTATGGTCACGATCTCAAGTTAACAAGAGAGGACTGTTACATTCCCCAAAACCTGATCTCTGTCAGAAAGTATCAAGCTTTGAGCTTGATGATCTCCAGTTCACTGTGGTCTTCCAAGATTTGAGGATGGAGCAGTTCAAAGAGAGGAAGTTTGTGTGTAAGTTCTGTAGCAAGAGGTTCGCTTGTGGCAAATCACTGGGAGGTCACATCAGAACTCACATGAACAAAGAGAACTCAGCTGATTCAGATGAGGATGAGCACAACAAGCTCAGGATCGACGAAAATGGAGGTCAAGCTAGCTACGGTCTGAGAGAGAATCCTAAAAAGAACAAGAAGTTTGTGGTTCACAGAGACATGATAGCTCTGAAACATCAGCATCAACAACAGCTTCTTTATTGCAGAGAATGTGGTAAAGGTTTCACTTCTTCGAAAGCTCTTTGTGGTCACATGGCTTGTCACTCTGAGAGAGAGAAGATTCTGATGGATGGTCAATCTGATACTGAAGCTTCTTCCTCTCCTATCAGGAGAAGATCAAAGAGAGCTGTGAAACATCATCATAACCACAAGGCTGATGCTTTTGTTGATGGTGATAGCATCATGGATCAATCTGATTCATCAGCATCTGAGATTGAACCGGAGCAAGAGGAAACAGCATTGTCTTTGATGATGCTGTCTAGAGACTCAAGTTTCAAGAAAGTACGTAACTTGGTTGTGAACTCTCTGGCGGAGTCATCAGACAACAACTCTGTGATTCTTGAGACTAAGTCATCTTCAGGGGAACAGCTCAAGATCTTACATGTGAAGAATGTTGAGGAGTTTTGTAAGAAAGACAAACTTGGTGGAGTGGATAATGGTGATGTTCTGTATGATTCAGACAATTCTGATTCTGGTTACTTCAGGAACGGACCAAAGAAGTTGGACTCAGATGTTTCTGTTGATGGGTTCCTCAAGAACAATGCATCTAGTAACAAGTCTGCAATGGGATTCAACAGCTACACACCAAAAAAGGAAAAGAGCTTGAACAGATTCAGGAACGAATGGTCAGGTTCAGGATCAGGTCGTTCTTCTACAAAGTATGATCTGAGGCAAAGCAAAAGAGGGTTTCCTTGTTACGGTAGAAAGAAAATCAAGTACGAGTTCACTGAATCTGTGTATGACAGTGGTGATCAGCTTAGCTTGGAGACTGATTCTTGTGCGGACACAAACAGAAGTATCAAGAAGATTCATAATAGCAAACCCCCAATGGTTAAGAAAGTAAGTGGTGGGGCAAAGAAGAAAAGCAAAGGTCACGAGTGTCCAATTTGCTTCAGGGTGTTTAAATCGGGACAAGCTTTAGGTGGTCACAAGAGATCACATTTCATTGGGAGTCAAGATCACAGGACTTTGGTGATTCAACACCACCACCAAGTAGCTCATGATATGCATACACTCATCGATCTCAATCTTCCTGCTCCTATTGATGAGTGA
Protein Sequence:
- >GSBRNA2T00142469001|Brassica_napus|C2H2|GSBRNA2T00142469001
MRHHRGGADEIFSHGAMIARRSNRRSLTTRPNPCRQRRLASTPAMFSCTLTEDESFLCPADGAIMITCILIDLGFYNKYSKPSSLQQEQSAAVDSSGREFNRNRLIALLSAIVLEQIRVSGFGGWFLLRLSLHDPVLPLNIETNTMRVMLSLFLKHNPPRLWSRSQVNKRGLLHSPKPDLCQKVSSFELDDLQFTVVFQDLRMEQFKERKFVCKFCSKRFACGKSLGGHIRTHMNKENSADSDEDEHNKLRIDENGGQASYGLRENPKKNKKFVVHRDMIALKHQHQQQLLYCRECGKGFTSSKALCGHMACHSEREKILMDGQSDTEASSSPIRRRSKRAVKHHHNHKADAFVDGDSIMDQSDSSASEIEPEQEETALSLMMLSRDSSFKKVRNLVVNSLAESSDNNSVILETKSSSGEQLKILHVKNVEEFCKKDKLGGVDNGDVLYDSDNSDSGYFRNGPKKLDSDVSVDGFLKNNASSNKSAMGFNSYTPKKEKSLNRFRNEWSGSGSGRSSTKYDLRQSKRGFPCYGRKKIKYEFTESVYDSGDQLSLETDSCADTNRSIKKIHNSKPPMVKKVSGGAKKKSKGHECPICFRVFKSGQALGGHKRSHFIGSQDHRTLVIQHHHQVAHDMHTLIDLNLPAPIDE*