Information report for GSBRNA2T00063056001
Gene Details
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Functional Annotation
- Refseq: XP_022567823.1 — uncharacterized protein LOC106408582 isoform X1
- Refseq: XP_022567825.1 — uncharacterized protein LOC106408582 isoform X3
- TrEMBL: A0A078HGG4 — A0A078HGG4_BRANA; BnaA06g17020D protein
- STRING: Bra018101.1-P — (Brassica rapa)
- GO:0016579 — Biological Process — protein deubiquitination
- GO:0005515 — Molecular Function — protein binding
- GO:0036459 — Molecular Function — thiol-dependent ubiquitinyl hydrolase activity
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >GSBRNA2T00063056001|Brassica_napus|C2H2|GSBRNA2T00063056001
ATGGGTCAGAAGAAGAAACCCCCCGCGCCTCGCTCCAAGCAATCGCTATCTTCTTCAGCGGCGGAGGCTGAGCCGTCCTCTGAGGTTTCCGCTTGTACCTCCTCTGAGGAGCCGTCAAATTTGGCTGAAATCAAGGCGGAGTGCGAGAAGGCACTGACGTCATTCCGGCGAGGTAGCTACAACAAGGCGATTCGGCTCATGAAGGAATCATGCTCTCGCCATCAACACTCTGCCCTAATTCACCGAGTCCAAGGTACTGTGTGCGTGAAGGTTTCTTCTGTATACGAAGACGCAGTTACTAAACAGAAGTACATCCGTAGCGCTATTGAATCCGCTAGAAAAGCTGTGGAGCTTTCACCCAACTCTATTGAGTTTTCCCATTTTTACGCTAACCTGCTTTACGAGTCTGCTAGCGATGGTAGAGAGTACGAGGAGGTTGTGCAGGAGTGTCACAGAGCTCTCGCCATTGAGAATCCAATCGATCCTGCTAAAGACTCTCTTCAGGACGAGAGTCAGCACAAGATATCGACACCTGAGGCTCGTATTGCGAACGTTCAGGATGAGCTCAGGTCACTGATACAGAAGTCTAATCTTGGTTCGTTGTCCACGTGGATGAAACATCTGGGAAATGGAGAAGGGGAGTTTCGATTGTTTGACATGAGGAAGATGGCTGAGGATCCTATTGAGAGTAACTTGGTTCAGACCAGAAGGCCGAACGAGATTAAGAAAGCTACCAAGACTCTTGAAGAGAAGAGGAAGGAGATTGAAGTGAGAGTGGCTGCAGGTAGGTTGTTGCAGCAGAAATCAGAATCTTCCTCGGTAGATAGCGTTAACAGCAAGGGATCAGATCCAGCATTAGGCTCGGGTCAGAGAAGCGGGGAGAGGAGAAAGCATGGGAATGCAAGGAAGAACGGCTCTACAGTAGAGAGAAGAGATCGGGTTAGATCATATTGGGAGTCTACAAGCAAAGAAATGAAAAAAGAATTACTTAGGATTAAGGTTAGTGATCTTAAGAGTCACTTTAGTGCATCCAAGGATGGCGATGCAAATGATATAATAACTGAAGCTTTGTCCTTTTGTGAAGCTAATAAGACTTGGCGGTTTTGGGTTTGCTGCAAGTGTAGTGAAAAGTTCAAGGATTCTGAGTCTTATATGCAGCATATTGTAGGGGAGCATATGGGTAATGTTTTTCCTAAGATGCAAATGGTTTTGCCTCAGAGTCTCGACAGTGAGAGGATTGAGATGCTTCTTACTTCCCCATGGAAACCATTGGATTTTCCTGCAGCGGTGAAGTTGCTTTGCAGCCAGCAGAAAATCCAAAATTCTGAGTTTAGTGAGTTTTACGCTGGAGGTTACATGGACGATGGTAACCTCCATTCTCAAAAACTGTTTGATTTCTCAGGTATCATGTCTCTATGGAATCTGGGGGTGTTTCGGGCTGAGTTCTTGCGTAGTTCAACTTTAGATCACCATCACGTTGGAGATCCTTGTGTCGTCTGCTCATTGTATGAAGTTCTTACTGCTTTAAGCGCTGCTTCGAGGGAAATACGAAAAGAACCTGTAACACCTTCAACGCTCAGAATTGCGTTGAGCAACTTGTATCCAGATAGCAGTTTCTTCCAAGAGGCTCAGATGAACGATGCTTCAGAAGTATTGGCTGTGATTTTCGACTGCCTTCATCGCTCATTTGCTCAGAGCGCAAGCGTGTCTGACACAGATTCTTCTGAGAGCAACTGTACAGGTTCATGGGATTGTGCCAACCGCACATGTATTGCCCATTCTCTGTTTGGAATGAATATTTTTGAGCAACTGAATTGCTATAGCTGTGGGCTGGAGTCGAGGCATATGAAGTACACTTCCTTTTTCCATAACATCAACGCTAGTGCCCTACGGAACATGAAGGTTACCTGCCCCGAGACTGCATTTGATGAACTCCTAAATCTTGTCGAGATGAACCACCAACTAGCCTGTGATCCTGAAACTGGTGGGTGTGGGAAACCCAACCATATCCGCCATTTTCTTAACACCCCACCACATGTTTTTACGGCAGTTTTAGGGTGGCAAAACACATGCGAGAGTGTAGAAGACATAGCAGCTACTCTTGCAGCCTTGAATACCGAAATAGACATCAGCATCATGTACCGTGGTCTTGACCCTAAGAGCATATATAGCTTAGCTTCTGTGGTTTGCTATTATGGACAGCATTATCATTGCTTTGCATATAGTCATGAACACGATCGGTGGATCATGTACGATGACAAAACTGTTAAGGTGATCGGTAGCTGGAGTGATATACTTTCTATGTGCAAGAAAGGACACTTGCAGCCACAGCTTCTTCTCTACGAGAAGCAACGTTAA
Protein Sequence:
- >GSBRNA2T00063056001|Brassica_napus|C2H2|GSBRNA2T00063056001
MGQKKKPPAPRSKQSLSSSAAEAEPSSEVSACTSSEEPSNLAEIKAECEKALTSFRRGSYNKAIRLMKESCSRHQHSALIHRVQGTVCVKVSSVYEDAVTKQKYIRSAIESARKAVELSPNSIEFSHFYANLLYESASDGREYEEVVQECHRALAIENPIDPAKDSLQDESQHKISTPEARIANVQDELRSLIQKSNLGSLSTWMKHLGNGEGEFRLFDMRKMAEDPIESNLVQTRRPNEIKKATKTLEEKRKEIEVRVAAGRLLQQKSESSSVDSVNSKGSDPALGSGQRSGERRKHGNARKNGSTVERRDRVRSYWESTSKEMKKELLRIKVSDLKSHFSASKDGDANDIITEALSFCEANKTWRFWVCCKCSEKFKDSESYMQHIVGEHMGNVFPKMQMVLPQSLDSERIEMLLTSPWKPLDFPAAVKLLCSQQKIQNSEFSEFYAGGYMDDGNLHSQKLFDFSGIMSLWNLGVFRAEFLRSSTLDHHHVGDPCVVCSLYEVLTALSAASREIRKEPVTPSTLRIALSNLYPDSSFFQEAQMNDASEVLAVIFDCLHRSFAQSASVSDTDSSESNCTGSWDCANRTCIAHSLFGMNIFEQLNCYSCGLESRHMKYTSFFHNINASALRNMKVTCPETAFDELLNLVEMNHQLACDPETGGCGKPNHIRHFLNTPPHVFTAVLGWQNTCESVEDIAATLAALNTEIDISIMYRGLDPKSIYSLASVVCYYGQHYHCFAYSHEHDRWIMYDDKTVKVIGSWSDILSMCKKGHLQPQLLLYEKQR*