Information report for Gh_A01G1532
Gene Details
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Functional Annotation
- Refseq: XP_016711659.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_016711660.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_016711661.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_016711662.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017627392.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017627393.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017627394.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017634478.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017634479.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017634480.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017643203.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017643204.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017643205.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017646750.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017646751.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Refseq: XP_017646752.1 — PREDICTED: uncharacterized zinc finger protein At4g06634-like
- Swissprot: Q2V3L3 — YY1_ARATH; Zinc finger transcription factor YY1
- TrEMBL: A0A1U8LAN2 — A0A1U8LAN2_GOSHI; uncharacterized zinc finger protein At4g06634-like
- STRING: Gorai.002G214700.1 — (Gossypium raimondii)
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0043565 — Molecular Function — sequence-specific DNA binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arachis hypogaea: Ahy007622
- Cajanus cajan: C.cajan_20466
- Cicer arietinum: XP_004485467.1
- Juglans regia: WALNUT_00013081-RA, WALNUT_00013075-RA
- Manihot esculenta: Manes.10G120600.1.p
- Populus trichocarpa: Potri.004G221700.1, Potri.003G010400.1
- Prunus mume: XP_008218753.1
- Prunus persica: Prupe.1G576100.1.p
- Ziziphus jujuba: XP_015875821.1, XP_015865754.1
Sequences
CDS Sequence:
- >Gh_A01G1532|Gossypium_hirsutum|C2H2|Gh_A01G1532
ATGGAGATGCAGTACGCTCACGGTCTATTCGAGAGACGCCCCATTCTCAAATCTAAGGCTCCCGCTGTTAAATGGTTCAAAAGATGGGTACCTCAAGATGTTGTAGCAACGGGTGGAAAATGCATGATTTTGAAATGGGTAAATGAGAACACCTTGAAAGCATTGAATGACAAGGAGAAAGAGCCTGAAGCACCAGAGCCTGAACCAGAGCCTACTACTGAAGTTCTCTTCCTTTGCAGCTATGAAGGCTGTGGAAAGACCTTTATTGATGCTGGTGCTTTGAGAAAGCATTCACACATTCATGGAGAAAGACAATATGTTTGTCACTGGGAGGGTTGTGGAAAGAAATTTTTGGATAGTTCAAAACTGAAAAGACACTTCCTCATTCACACTGGAGAGAGAGACTTCATATGCCCACATGAAGGTTGTGGTAAGGCATTCTCCTTGGATTTCAACCTGAGGTCACACATGAAAACACATTCACAAGAAAACTACCATATATGTCCATACCCAGATTGTGGAAAGAGATATGCTCATGAGTACAAGCTAAAGAATCACATTGCATCACACCATGAAAAGAACACGACCCCAGAAGTGGCAAAGTATGCCCCACCTTTAGAGAAGATAGTTAAAACAACAAAGCCTACTGGTGGCGCCTATGGTTCTGCATCATCTGATCGCCCTTATGCTTGCCCTTATGAAGGTTGTGAGAAAGCTTACATACATGAATACAAACTAAAACTCCATTTAAGGAGAGAGCATCCTGGACATATGTCAGATGAGAATGCTGAGAACGCCACAGCCAATGCTGACAATGAGATGGATGAAGCCAGTGATCAAGATGCTTATGCTGGAAAGCGAGTTAATGGAAAAAGTCAGAAACAACAAAGTAGGGCCAAGCCAAATGTGAAGATGCCTCCGGCAAAGGTTGCTCGACAGAAAGGCTCGAGTCCATCTCCTGCGACTTTGCCTATACCCAAGAAACAGTGGCCAATCAAAGAACAAGTATTTGAGGAAGAGGATAGCGAAGAAACTGAAGAAGACCGTGACAATGTAGATGATGGATGGAGGTACCGGGAAAACAATGAAGATGATGACGAAGAGACAGAATATGAAGACTAG
Protein Sequence:
- >Gh_A01G1532|Gossypium_hirsutum|C2H2|Gh_A01G1532
MEMQYAHGLFERRPILKSKAPAVKWFKRWVPQDVVATGGKCMILKWVNENTLKALNDKEKEPEAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQYVCHWEGCGKKFLDSSKLKRHFLIHTGERDFICPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNTTPEVAKYAPPLEKIVKTTKPTGGAYGSASSDRPYACPYEGCEKAYIHEYKLKLHLRREHPGHMSDENAENATANADNEMDEASDQDAYAGKRVNGKSQKQQSRAKPNVKMPPAKVARQKGSSPSPATLPIPKKQWPIKEQVFEEEDSEETEEDRDNVDDGWRYRENNEDDDEETEYED