Information report for FANhyb_rscf00001142.1.g00004.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_004291047.1 — PREDICTED: ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
- Swissprot: O80983 — FTSH4_ARATH; ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
- TrEMBL: A0A2P6Q1E0 — A0A2P6Q1E0_ROSCH; Putative ATPase, AAA-type, core, peptidase, FtsH
- STRING: XP_004291047.1 — (Fragaria vesca)
- GO:0006508 — Biological Process — proteolysis
- GO:0010073 — Biological Process — meristem maintenance
- GO:0005739 — Cellular Component — mitochondrion
- GO:0009536 — Cellular Component — plastid
- GO:0016020 — Cellular Component — membrane
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0004222 — Molecular Function — metalloendopeptidase activity
- GO:0005524 — Molecular Function — ATP binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >FANhyb_rscf00001142.1.g00004.1|Fragaria_x_ananassa|C2H2|FANhyb_rscf00001142.1.g00004.1
ATGATGAAAGGTTTTGCAGTGGATGAGAACATGTCCAATTTAACCTGTGCATCTGGAGATTTAAGCGCTTCTGCCAATTCGAGTATCAGAAATGATTCATCATCTTCTACACATCAGCAACAACCAGCGCAAAAGAAGAAGAGAAATCTTCCAGGCAACCCAGACCCAGATGCTGAAGTGATAGCCTTGTCACCAAAATCACTCATGGCTACGAATCGATTCATATGCGAAGTGTGCAACAAAGGGTTTCAGAGAGAGCAGAACCTTCAGCTTCATCGGAGAGGCCACAATCTGCCATGGAAGCTAAAGCAAAGGACAAACAAGGAGGTGAAGAAGAAGGTGTATCTGTGCCCGGAACCGACATGTGTCCACCATGACCCGTCGAGGGCTCTTGGGGACCTCACTGGGATCAAGAAGCACTTTTCCAGAAAGCACGGTGAGAAGAAGTGGAAATGTGAGAAGTGCTCGAAGCGATATGCAGTTCAATCAGATTGGAAAGCTCATTCTAAGATCTGTGGCACAAGAGAGTATCGATGTGACTGTGGAACCCTTTTCTCTAGAGCATTTTCTTCTCAAGATGATCAAGACTTTTTCGACATGGCTGCTGCTCATGGGCTCGACCAGCATGTGGTGAATCCTACTTCTTCAGCTAATTACAACGGACAGCAGCATAATAATCAGAACCAGACTTCTTGGCCAGGAAAATACGTCAAAATAGAAGTAGAACATGTGAACCATGCCAGTAAACTTGTTACTGGTGGTAAGTCTGGCACTGACAAAGATTCGTGCAAGTACAGTAACACTGGTGCATGGATGTCGACACTGCTTGATGATGGTGGTGCTGGTATTCATGCATACATTGGAGTTAGTATGTACTGGTGGCAAGCTGGTTTCTCTGTTAATATTCAATCAAGAAGAGAAAAGAAAACGTTCAACACCCTAGTATCTCTCTTCTCCTCTCCATTCTTCCCGAACCTTGCTCCTTCTGCTTCTCTTCTCCCCCAAATCGAAACGCCACCGTTTTTCACACATCCCAAGTTTTCAGATACAGCTAGGTTTTGCGGTATGTATAGGGGTATACATAGGTTGGAGTTAAGTGTGGAATTGAGCTATTGCACTGTGTGCCGGTGCTTTGAGTTGATAGAAAGGCTGAATCTTTATGCTGAATGGGAGGGTACATATGACATAGGTGGGGAAGTAATGGGATGTGTGTGTTTTTCTTACCTTTCATACCCTTTCAACTCTACCCAGTTTGTATCAAGGCATAGATCAGAGTTGGGACAGCTGAAAAAAGTCTTTGCCAGAACATATTTTCCAGTCAACAGGGTTGCAGGAGGTGCTGGAGGGAATACAGTTTTTAATACTCAAGAGAGGTTTCAGTCAAGCTATGTGCGCAGTTTTGCTCGCAGAGCACGTGAACTTGATGAAGTTAATGAACTTGCCTATCTAAAAGAACTGTCCATGCGGAATGACCCTGAAGAAGTGATACGATTATTTGAAAGTACACCATCATTGCATTCCAACTCTTCAGCGCTTTCAGAATATGTGAAATCATTGGTAAAAGTTGGCAGGCTGGATGAGAGTGAGTTACTGAAGACATTGCAGAGAGGTGTATCTAACTCTGCAAGGGAGGACGAAAGCGTTGGCAGCTTCTCAGTTCTTAGGAACGTTGGAAAGTCTACGAAAGATGGTGTTCTGGGAACTGCAAGTGCACCTATTCATATGGTGGCTAGAGAAGGAGGACTTGGACTAAATGAAGAGGTCCAACCTAGCATGGAATCTAGCACAAAGTTTACTGACGTGAAGGGAGTTGATGAGGCTAAGGCAGAGCTAGAAGAAATTGTACACTATCTCCGAGATCCTAAGCGTTTCACTCGTCTTGGGGGCAAGCTTCCAAAGGGTGTTTTGCTGGTTGGCCCACCTGGCACTGGCAAGACGATGTTAGCAAGAGCAATTGCTGGAGAAGCAGGGGTACCTTTCTTTTCATGCAGCGGCAGTGAATTTGAAGAGATGTTTGTTGGTGTTGGAGCTCGAAGGGTGAGGGATCTCTTTGCAGCTGCAAAGAAGCGGTCACCATGTATAATTTTTATTGATGAGATTGATGCAATAGGAGGAAGTCGCAACCCAAAGGATCAGCAATACATGAAGATGACTCTGAATCAGTTACTTGTTGAACTTGATGGTTTTAAGCAAAATGAAGGAATTATTGTTATTGCTGCTACCAATTTCCCAGAGTCGCTGGACAAGGCATTGGTGAGACCTGGACGGTTCGATCGCCACATTGTTGTTCCCAATCCTGATGTTGAAGGGCGGAGGCAGATTATGGAAGTCCATATGTCAAAGGTTCTGAAGGCTGATGATGTTGATCTGATGATCATTGCTAGAGGAACTCCTGGGTTCTCTGGTGCCGATCTTGCCAACTTAATCAACGTAGCTGCTCTGAAGGCCGCCATGGACGGTGCTAAGGCAGTGAATATGGCTGATCTGGAGTATGCAAAAGACAAGATTATGATGGGAAGTGAACGAAAGTCGGCTGTTATATCTGATGAGTCACGAAAGCTAACAGCTTTTCATGAGGGTGGCCATGCACTTGTGGCTATCCACACTGACGGTGCTCATCCAGTTCATAAGGCAACAATAGTTCCCCGTGGTATGGCACTTGGCATGGTTGCCCAGTTGCCCGAGAAAGATGAGACAAGCGTCTCAAGGAAACAGATGCTTGCGCGGCTTGACGTTTGCATGGGGGGAAGGGTTGCAGAAGAGCTCATATTTGGTGAAAGCGAAGTTACTTCAGGTGCTTCTGATGATCTCCGGCAAGCTACTTCTCTTGCCAGAGCAATGGTTACCAAGTATGGCATGAGCAAAGAAGTGGGGCTTGTTACTCACAATTATGATGACAATGGGAAGAGCATGAGCACAGAAACTAGGCTGCTTATTGAAGAAGAAGTGAGGCGCCTCTTGGAAACGGCTTACAACAATGCAAAGAATATACTTACCACTCATCACAAGGAGCTCCATGCTCTCGCTAATGCCTTGCTGGAGAAAGAGACACTCACTGGAAAACAGATCAAGGCCTTGCTTGCTAACTTGAACTCTCAGCAAAATCAACAACCGCAACAGCAAGTCATTGCGGAAAAAAGTAGTTCACAGTCAAACCCAGTGCCTCCTCCATCAACACCCAATGCAGCTCAGTCTGCTGCTGCTGCAGCAGCCGCGGCGGCGGCGGCAGCAACCGCTGCTGCCAAATCAAAAGGCATGGCTCCTGCGTCTTAG
Protein Sequence:
- >FANhyb_rscf00001142.1.g00004.1|Fragaria_x_ananassa|C2H2|FANhyb_rscf00001142.1.g00004.1
MMKGFAVDENMSNLTCASGDLSASANSSIRNDSSSSTHQQQPAQKKKRNLPGNPDPDAEVIALSPKSLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQRTNKEVKKKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRAFSSQDDQDFFDMAAAHGLDQHVVNPTSSANYNGQQHNNQNQTSWPGKYVKIEVEHVNHASKLVTGGKSGTDKDSCKYSNTGAWMSTLLDDGGAGIHAYIGVSMYWWQAGFSVNIQSRREKKTFNTLVSLFSSPFFPNLAPSASLLPQIETPPFFTHPKFSDTARFCGMYRGIHRLELSVELSYCTVCRCFELIERLNLYAEWEGTYDIGGEVMGCVCFSYLSYPFNSTQFVSRHRSELGQLKKVFARTYFPVNRVAGGAGGNTVFNTQERFQSSYVRSFARRARELDEVNELAYLKELSMRNDPEEVIRLFESTPSLHSNSSALSEYVKSLVKVGRLDESELLKTLQRGVSNSAREDESVGSFSVLRNVGKSTKDGVLGTASAPIHMVAREGGLGLNEEVQPSMESSTKFTDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQIMEVHMSKVLKADDVDLMIIARGTPGFSGADLANLINVAALKAAMDGAKAVNMADLEYAKDKIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTDGAHPVHKATIVPRGMALGMVAQLPEKDETSVSRKQMLARLDVCMGGRVAEELIFGESEVTSGASDDLRQATSLARAMVTKYGMSKEVGLVTHNYDDNGKSMSTETRLLIEEEVRRLLETAYNNAKNILTTHHKELHALANALLEKETLTGKQIKALLANLNSQQNQQPQQQVIAEKSSSQSNPVPPPSTPNAAQSAAAAAAAAAAAATAAAKSKGMAPAS