Information report for estExt_fgenesh1_pg.C_20478
Gene Details
|
|
Functional Annotation
- Refseq: XP_005651469.1 — hypothetical protein COCSUDRAFT_46285
- TrEMBL: I0Z8F6 — I0Z8F6_COCSC; Uncharacterized protein
- STRING: XP_005651469.1 — (Coccomyxa subellipsoidea)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >estExt_fgenesh1_pg.C_20478|Coccomyxa_subellipsoidea_C-169|C2H2|estExt_fgenesh1_pg.C_20478
ATGGGGCACTATCAGAATGAGCACATCTACTCTGAAAACATGCAGCAGACGGGGCCCGGAAGGCCGCAGAGGCCGCCCCTGGACAACAGGCGGCTGCGCGGCGCGCGGCCCTGCATCAGGCCGCAGGAAGGCGAAGTCAAAAGCGGCGGAAAATGTGAGAGCAGCGGCGCACAGCAGGAAGAGGATGTCCCGGCCTGCGTCATTTGCACTGGCCCCCTTTCGATCGTGGCGGTGGGCTCCTGCAACCACAAGGACATCTGCGCGCGCTGCAGCCTGCTCATGCGCCTGAATTATGATGACATAGCCTGCCCATTCTGCAAGACCGAGCTCTCCCAGGTGATTTTGACACGATGGAAGCCGGAGGGTGTGCCAGACTTCAGCGAGCTCAAGGGCCGGTCAGGCACCATGTGGCGGAAGCCTGCCTGGGCGCGGGGGGTCCTGGTGGACAATCAGTCATCCTCGGGGGGTTCCCCGCTCAGCAGTACTGTGCAGGGCATCACGGCTGTGGCGTGCCCGGTGTGTGACGAGGTCGGCGCTCGGCCGTTCAGGTCGGTGAACCTGCTGCAGGCGCATGTCAAGGTGGAGCATGGGCGCAGTCTCTGCAGCATCTGCCTGTCGGCGAAGCGGCGCTTCCCTCTGGAGCTGGAGGCGTACAGCGCTGATGACCTGGCGGCGCACATGGCAGCAGAGCACCCGCGCTGCGACTTCTGCAACCTTCACATGTACAGCGGGGACGAACTGTACGAGCACATGCGCGAGCAGCACTTCACCTGCGACATCTGCCAGCGCGCCGGCTCCTTCCTGCACTTCACCTCTTCCGATGCCCTGATCGGCCACCTCAGGAGTGACCACCACCTGTGCGAGGAGGCGGAGTGCGTGGGCTGCCTCATCGCCTTCGCCACCCCGGATGAGCTGGCGCAGCACCGGAGGGAACGCCACTCGCGCGCCATGCCGCGCTTCAACCGCGCTCGCGCACGCATCATGCCCCTCGGCCTCGACGCGTTTCCTTCGCGGCCGCTGCCCACATCCCCTGACCGCGACAGGGTGCAAGAGCAGTCTGTCGGCCGGAGCCAGCGGCCACGCAGCGGGGGCCGCGGCTCCTCCGGCAGTGCCGCGCGCGCGGGCGGGAGGGGCCGGGAATCCGCGCCGCAGCCGCGACCGGCTGAGGAACCGTCTACCAGCGGCGGCATGGTGATGATCGATGACGACCTGGGTATGACTGGGGACGCGTTCCCTGCCATGGGGCCAGCAGCTAGCGGCAGCAGACAGGGGAGCGAAGCGCGGCGGCATGCCCAGGAGGAGCAGGGCAGTGAGGAGTTCCCCAGCCTGCAGGCTGCGGCGCAGTCGGCCAGCCAGGCCAATGGTCATGCGCCCGGGGGCTCTGCACAGACTCGACCCCCAGCGCTGCCGTCGCTGCAGAAGGTGACGGTGAAGTGCGCGTGCGGGCGGCGCGTGTCACACATTGCGCTGCCGGTCGGGACGGCGCCGAAGCCGATCCGGTGCGACGCGGAGTGCGAGCGGGTGCAGCGCAGCAGCCGCCTGGCCGACGCATTCGGCATCGGCGACCCCGGCCACCACGTCCCCTGGGTGGACCGCCAGAGGCAAGCCATGCAGGACGCGCACTATTCGCCGGAGCTGCTGCTGTACGCTTGGCATAACCGGGCAGCGGTGGAGGACCTGGAGCGCCAATTGGCGGACTTCGTTGCTGACGGGGCCAAAAAGCGCGCCAGCCTGGCAGCCGCGCCTAAACAGGCGCGCCACATAGCCCACCTGCTGGCCGAGCAGTATGGCCTCGCCACGCAGAGCTTTGGCGCGGAGCCCAACCGCTGCGTGCAGCTGTTCAAGGGGGCGCATGCGGCGGTGCCGCGGCAGGCGCTGTCGCGGGCGGCGGCTGGCATGCCGCTGGAAGATCTGGAGCGGGCGGTGCGCGCGGAGAAGGGCTTTCCCGTGCACTTCACCGACGTGGCTCCGGCCGCCGACCTGCATCGCATCCTGCAGCGCTGGGAGGGCCAATTTGTGCTGAGTGGACCTCACGCCGACGGGAGCGCCGCCGCGCGGTTCTCCCGGCCGGAGGGCGCCAAGGAGGTGCTGGATGCTCTGGGGGGCGGAGTGCGCGGCCAGTACCGGATCAATCGCGCTGCCAGCACGCCGGCCGCTTCGGCACCTGCCGCCGTGCCGCAGGCACATGCCGGCAGCACCTGCGCAGCCTCTGCTTCCAGGCCCACTGCCGGCCATCAGAGCTCCCATACGGGCATCAGCAGCAGCGGCCACTGCAGCAGCCATCAGAGGCCACAGCCGCCGCGGCCGTCAGGGACTTTTGTGGTCAGTGCAAAGATTGACCCTCTTGCAATCCGCGCGAGCGACATGGCCTTTGAGGAGAGCCCGGCATCCGCAAAGCCTGCTAAGACAAAGCCGGAGACAAGGCTACCTGCAGGAGTGCTCCCTGGCTCAATTCTCAAAGACGGGACAAGCAAGGAGTCAGCAAATGGAGCAGCGACAGTGGGGCAGGATGCGGAGGCAGGCTCTCATCTTGTGGCTGAGAATTGGGAGGACGCGGCTGATGATGGTCAGGAGTAA
Protein Sequence:
- >estExt_fgenesh1_pg.C_20478|Coccomyxa_subellipsoidea_C-169|C2H2|estExt_fgenesh1_pg.C_20478
MGHYQNEHIYSENMQQTGPGRPQRPPLDNRRLRGARPCIRPQEGEVKSGGKCESSGAQQEEDVPACVICTGPLSIVAVGSCNHKDICARCSLLMRLNYDDIACPFCKTELSQVILTRWKPEGVPDFSELKGRSGTMWRKPAWARGVLVDNQSSSGGSPLSSTVQGITAVACPVCDEVGARPFRSVNLLQAHVKVEHGRSLCSICLSAKRRFPLELEAYSADDLAAHMAAEHPRCDFCNLHMYSGDELYEHMREQHFTCDICQRAGSFLHFTSSDALIGHLRSDHHLCEEAECVGCLIAFATPDELAQHRRERHSRAMPRFNRARARIMPLGLDAFPSRPLPTSPDRDRVQEQSVGRSQRPRSGGRGSSGSAARAGGRGRESAPQPRPAEEPSTSGGMVMIDDDLGMTGDAFPAMGPAASGSRQGSEARRHAQEEQGSEEFPSLQAAAQSASQANGHAPGGSAQTRPPALPSLQKVTVKCACGRRVSHIALPVGTAPKPIRCDAECERVQRSSRLADAFGIGDPGHHVPWVDRQRQAMQDAHYSPELLLYAWHNRAAVEDLERQLADFVADGAKKRASLAAAPKQARHIAHLLAEQYGLATQSFGAEPNRCVQLFKGAHAAVPRQALSRAAAGMPLEDLERAVRAEKGFPVHFTDVAPAADLHRILQRWEGQFVLSGPHADGSAAARFSRPEGAKEVLDALGGGVRGQYRINRAASTPAASAPAAVPQAHAGSTCAASASRPTAGHQSSHTGISSSGHCSSHQRPQPPRPSGTFVVSAKIDPLAIRASDMAFEESPASAKPAKTKPETRLPAGVLPGSILKDGTSKESANGAATVGQDAEAGSHLVAENWEDAADDGQE*