Information report for Do012419.1
Gene Details
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Functional Annotation
- Refseq: XP_015635006.1 — protein SENSITIVE TO PROTON RHIZOTOXICITY 2
- TrEMBL: A0A1E5W708 — A0A1E5W708_9POAL; Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
- STRING: OGLUM04G01880.1 — (Oryza glumipatula)
- STRING: ORUFI04G02970.1 — (Oryza rufipogon)
- STRING: OS04T0165200-01 — (Oryza sativa)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Do012419.1|Dichanthelium_oligosanthes|C2H2|Do012419.1
ATGCTCCCGTTCTCGCCCGGTGCCATCCCCCACGCCACCGACGTGCTCGCCTACCACGTCGCCGTGTTGAGGGACAAGGTCCAGCAGCTGGAGCCCCTGGTCGGCATGGTTGTCTCTCCTCCCAACCCGCACCACCACGGCCGGTACGAGGCCGCGGCCATGGTGGCGCACAGCGCATGCTCCCTCCTGCAGGAGATAACAGCAGCGGCGTCGAGGGTGGCGCATCGACTGTCCTCCAACAGAGCCACGGCCAGCAACGAGCAGATGTTTTCGGCAGCGCATGGAGCAGAAACCTTGCCGTTTGGCAACGGGCCGGCGGCCCTATTCAGCGGCGCTGCCTCAACGAGCACCGAGGCACACCCAGCAGGGAGCTTCAGTGTTCCGGCTGCATCAACCAGCGGCCTGGCAGGTACGGGCGACCTCGTGCTTGCCGGGGGCGATGATACCGACGCTGTGGTTGAGCTGGACGCGTCGTACTTGCTGGCAAGGTACACGCACTACTGCCAGGTGTGCGGCAAGGGGTTCAAGCGCGACGCCAACCTTCGCATGCACATGCGCGCGCACGGCGATGAGTACAAGACGTCGGCGGCGCTCAGCAATCCGCGTTCAAGCTCGGCCGCCGCCACCGCCGAGAGGCGCAGCTATTCGTGCCCGGCGGAGGGGTGCCGGTGGAACAGGCGGCACCCACGGTTCCAGCCTCTGAAGTCAGTGGTGTGCGCCAAGAACCACTACCGGCGCAGCCACTGCCCAAAGCTGTACGCGTGCCGGCGCTGCGATGGCAAGCAGTTCGCCGTGCTTTCAGACCTCCGCACGCATGAGAAGCATTGTGGTGAGCTCCGGTGGCGCTGCTCCTGTGGCACCTTCTCCCGCAAGGACAAGCTCCTGGGACACGTCGCCCTATTCGCCACAGTTAGCCATATCATGAACAACCCATGCTTCCCTCTCAACCCACAGGGGTTCCAATTCTTCCACCAGGATGTGAACCATGGTGTACTCCCGATCTCGCACGGTGCCGCCGCTGCAGACTCGGTCGCCTATCATGTCGCCGTGCTGCGTGATAAAGTTCAGCAGCTCGAACCCCTGGTCCACATGGTGGTCTCACCTGCCGCTCACCACCTCGGCCGACCCGAGGACTCGGTGATGGCAGCGTCCAGCGCCTGCACCGTCCTGCAGGAGATAGCTGCTGCAGCATCCGCGGTGGCGCATCGGCTCTCCTACAACAGAGGAAGGCCCATCGACAACAACCACGAGCAGGTGTTCGCGGCGGCGCGTGGAGCTGACACCTCGCCGTTCCGCCATGAGACTGCTGCCCTGTTCGGTGTCGCCAGCACCTCTGCGAGAACCGCCCAACCTGCTGCGTTGGAGCGTACGGAGAGCTTCAGCCTCTCGGCGGCGTCATCAGCCAACGGCCGGTCAAACCGCGAGCTCGGGCGCGGCGGCGACGCCGCCCCTGAGGTGGTGGAGCTGGACGCCTCTTACCTGCTAGCCAGGTACACGCACTACTGCCAGGTTTGCGGCAAGGGGTTCAAGCGCGACGCCAACCTGCGGATGCACATGCGCGCGCACGGCGACGAGTACAAGACTATGGCTGCGCTCAGTAATCCGTCTGGCTCCGGTGCCACCAGCGAGAGGCGCAGCTACTCGTGCCCGGCAGATGGGTGCCGGTGGAACCAGCGGCACCCGCGGTTCCAGCCGCTCAAGTCGATGGTGTGTGCCAAGAATCACTACCGCCGGAGCCACTGCCCCAAGATGTACTCGTGCCGGCGGTGCGACGACAAGCAGTTCGCCGTGCTCTCCGACCTCCGCACGCACGAGAAGCACTGCGGAGAGCTCCGGTGGCGCTGCTCCTGTGGCACCTTCTTCTCCCGCAAGGACAAGCTCATGGGACACGTCGCGCTCTTTACCACTGGCCATGCTCCCGTCCCAATTGCCGCGGCGCCGACGGAGAGATCATGA
Protein Sequence:
- >Do012419.1|Dichanthelium_oligosanthes|C2H2|Do012419.1
MLPFSPGAIPHATDVLAYHVAVLRDKVQQLEPLVGMVVSPPNPHHHGRYEAAAMVAHSACSLLQEITAAASRVAHRLSSNRATASNEQMFSAAHGAETLPFGNGPAALFSGAASTSTEAHPAGSFSVPAASTSGLAGTGDLVLAGGDDTDAVVELDASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALSNPRSSSAAATAERRSYSCPAEGCRWNRRHPRFQPLKSVVCAKNHYRRSHCPKLYACRRCDGKQFAVLSDLRTHEKHCGELRWRCSCGTFSRKDKLLGHVALFATVSHIMNNPCFPLNPQGFQFFHQDVNHGVLPISHGAAAADSVAYHVAVLRDKVQQLEPLVHMVVSPAAHHLGRPEDSVMAASSACTVLQEIAAAASAVAHRLSYNRGRPIDNNHEQVFAAARGADTSPFRHETAALFGVASTSARTAQPAALERTESFSLSAASSANGRSNRELGRGGDAAPEVVELDASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTMAALSNPSGSGATSERRSYSCPADGCRWNQRHPRFQPLKSMVCAKNHYRRSHCPKMYSCRRCDDKQFAVLSDLRTHEKHCGELRWRCSCGTFFSRKDKLMGHVALFTTGHAPVPIAAAPTERS