Information report for Dca4006.1
Gene Details
Functional Annotation
- Refseq: XP_021740226.1 — uncharacterized protein LOC110706595
- TrEMBL: A0A0K9RTD1 — A0A0K9RTD1_SPIOL; Uncharacterized protein
- STRING: XP_010676391.1 — (Beta vulgaris)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Dca4006.1|Dianthus_caryophyllus|C2H2|Dca4006.1
ATGGCTTCTGCTACGGTGGGCCCCTCTCCGCCTCCGCCGCCTTCCGATCATCTCACCGTCGAATCTATCCCCACCGTCGATCTCCGCCGCCTTACACAGTCAGAACTCGCCGCACTCGCTCTGTGCTCCTCACGCGCCGTCGACCTCCGCCGCTGCGACGACGTCGTTATACCTAAAATCGACCGCTCTGTGTTTAATGAGTCCGCCGGAAGTCGGAAGCAAACTTACTCTCGCCTCCGTCTTGCGCCGCGGAATAACCCTAATTTGATCGACTCTGCGGCGGCGGCGGCGAAACCTCGCCGTGTTACTCCCGAACCTCCCGTACTCGACGCCGAACACGCTGAGAATTTGCGCATTGTTTCGTTGTTTAAGAGCTTGTTTAATTTGAGCAATGGTGTTGATGTTTCGTCGAATGATGATGTTGAGAACCACGATGGTTGTGGCGGTGGTGGTGGTGATGAGCTTGCTCTTGTTCCGGTGAGCGTTACGTATTGCGACACTGTGCCTGGTGATAAGAAGAGGAAACGCGGCCGAAAACCGAAAAGCGAAACGTCTTTGGAAATGACGGTGTTTGAGGAGAAGAAGGCCGAGGATGAGGCGGCGGAGGTGGAGGTGATGGAGGAGGAGGAGGAGGAGGAGGATGAGGAGACGGCAGAGGAGGTGGCGGCGGTGACAGTGGAGGAGGTGCAGAGAAGGTGGGAGGAGAGTGAGAAGGAGTTGGTGAATAAGAATGGAGTGGTGGTGAATTTGGCGGAGTTGGCGAAGGCGGAGGATCCGTATACGGTGGAGTTGAAGCGGTTGACGGAAGGGAAGGAGACGGCCGAAGAGTTGCTAGGGTTTGTGAATGATTTGGAAGGGGAGTGGGGTAGTAGAAGAAAGAAAAGGAAGATTGTCGATGCGAATTTGATAGGGGATTTTTTGCCAAATGGTTGGAAGATTTTGATCGCTATTAAAAAGAAGCAAGGCCGTGCTTGGGTGTTTTGTCGTCGTTACGTTAGGTTATTTCTTCCTTCTTTTCGTTTGTCAAGTCCTAATGGACGGTATTTTGTGTCCTGCAAGGAAGTCTCTTCTTATTTGATCTCCTTGACTGGCTCTCAAGAGCCAAAAGAGCAGCCTGCTGTTGAAGATCCTGATATTACAGCCGTGGACGTGGCTTCTAAAAACGCTGTAGAGACAGAAACAAAGGTCGAACATCAGGCAATTCCTGATTCTTCACTGTTCAAAGATCGTGAAGATAGGCATATGCACCTTAATATCTCCCCGAATCTGGAAAATCGGGTTACACCGTCCAAGGATGTTCAGTTGGGGGAAGTACATGAATTATCTACATCTGCTTTGAAGTGTCACAAATGTTCTACTCCGTTTAATGAGAAGGATGAGTTATTGAAGCATCTTATATCATGCCATAAGAGAAAACGGCGAAAGGCTGGTGTTTACATTGAAAATGATGATCTTTTGAAGGATGGTAAGTATGAGTGCCAGTTTTGTGATAAAGTTTATCTTGATCGGGGTAGTTACTTTGGACATGTTGGAATACACGTCAAAAACTATTTGAAGAGTGCTGGTGGGAGTTCTAGCGTTAAAGCTAAACAAAAGACCTTTAAGCCAGTATCTATTGGTGAAGTTTCTTTGTCTGTTTCTGAAACACTTGGATCAACAGAACTGATCGCTGAATCTGGTGCTGGTACACAAAATATGTTGGGTAATGGCGAGCTGAATAATGACTGTAAAGAGAAGAAAATAACTGCTCCTGATGCTGAAAGGCTTTCAGAAAATGAAAAAAATGATCACAGTAGTTATACTCGTCCAATGGAGCTGAATGCTGCTCAAACTGACAAAACATTAGATTGCGAATCTTCTGGCAAACAAGAAGCTGCTGATCATATTGCTAATAAAAACACCACAGAGGTTGACTGTACTAATAAAAACACCACAGAGGTTGACTGTCCTGGTTCCGACAAGGTGGTGTTAGATTACAGTGATAATTATCAGGAAATAATTTCTAGTGAATTTGTGTCACCAGAAGCAATCGAACGCCCTCCTGTTGTGGCGGAAAATTCTGAAGCATATTTGTCATCTGATAGCAAGCTATCAGATTTTGGTGCTGATAGCAGTTTTGTTACGGAGAACGTGTTGGAAACTGAGGAGAGGTTAACTTCTGAATTTGATCTGGCTGCTGGCAATGAGGGAAAGTCAAGCAATCAGAGTTTTGCCAAATGTTATTTGGTGAATAACCCTGTGGAGCGTTATTGTTACGACGAAGAAGTAAATGTTATGCATCATCAAGGGCTGACAGAGGTATCTGGGAGTGGCCATATTGATGTTGACATGGTTGATGAAGATGATATCAAGGGCTTGGAAAGCATGGAAGAATCATCAGCCGTTCCCTTCACAGCAGAAGAGAGTTGTGGTGTCATAATGAACAAGACTGAGAATATTGAATCTAAAGTTTCTACTTTATCTGATGATCAACAGACGAAGACATTGATGGTAAACAAAAGGCATGATTTTGCTGATTTAGTCAACGAGACAGAAGTGGACTTGAGCAGCTTTGAGAACACTGAACTGACCGACGATTATGAGAGGATCATTCAGGAAAGACACTGTGAAAGCAATGTGCAGTTTTACTCGAAGGATAATGTTTCTAATTACAGCTCGAATGAGGCAGTGAGAGGTTCTAATGTCAAAATGGTGCAACCTTCAGGGGTCAGAGATTTTCAGCAGTTCAAGCACTCTTGTAGCACTGAGAACAACACTGGAGAGGTCTTGAATAAACAGGGTGAAGAACATACTGGCAACCTTTTTTTCCAGTCTAGAAGTAGGGACAGTCATTTAGATACCACTGATATAACTAACACTGACCAGTCACATAATCATGTCCCTGATGTACTACGGTCCTTTGATAGTTATGTTGACGACAAGCAGGCACAAGTTTCAAAGAGCTTATTTTATGCCCTTTCCATGAATGAACACAGTCGTGAAGTTGCTATGAACGATGTGGGAAATGTTTCCACCTCAACAACCACAATGCATTTACCTGAACTTGAAAAGGTGGACAGCTCGAGGTCTAGTAATTTGCTCCTTGATTTTAACAATATCACGGAAATGAATGGAAATTTTCTGAGTTCTGCTCAGCATGGTGCCGTTCCTGAAGAGACTTCTCCCTTTCAACTGTGGGGACAACAATCGAATGGTCTTGTGGACAGCCAAACCAAGGTTTATGGAGGTGGCAGTACGTTTCTTCAGCAGGCGAGGGCCTCCCAGAATAATTCACTGAATCTGGTTGGTCATCAGCGACAATCTACTGAAGGCTACAATTTGAACGAGGTTTGTATGAATGAGCAAAGGTATGGTCAACGTAATAAACTAGGAGTTTTCAGTAGAAATAATGAAGCTAGAACAGAGGGTATATCTCATGGCAATGCCCTTAATCTAGCTGGATACCAACAGCAATGTGATTTGGGATATAACTTGAATAAACCTTGTATTAGTCAACAAAGCTATGGCGTGCAACATACGGAAAGCGGAAGTTATAATCATCTCAATCAAGCTAGACAAGATAGAGTGGCTTATGGCAATTCCCTTAGTCTAGCTAGTGTTCAGCAGTGTGATTCACGGTATAGCTTGAACAAGACGCGTGATCAGCAACCAGTTGATACGGGGTACAGCTTGAACAAAGGGTATGTTGACTCTCGAGACAGGGACTTGATGATTGGTTTCGGAAACAGTGGTGGCAGACGTAATCAGACTGGTACAACAGACTTTTTGTGGGGATCAAACGACGGAAGTATTCTGCCAGGTGGCTTGGTGGATTCTTCATCCTCCCAGGCTCAGTCCTCGGGGTCCTTTCAACCTTTTGATTTCCTTTCAGATAAGAGTGGGAATGACTTGTATAATGCCAACGGGAAATTCGACAATATGTCAAGTTTTGAAGGGTTGAGATCCAGTGTAGAACCAATGGAATTTAGTTTTATGACTCCACAGGAGTCTAATCCTCAGTTGGAGCACCCTAAGGTATTACAATACAACACGGAGATAAATCAAAGTTTCGGTTCATGGGATCAAAAGACGACTACGCTGCCAAATATGATGCCTAATCATGTTGTTACCGTGATGTGCGTATGGTGCGGAAATGAATTTCACCAAGATTCATTGTCCTGTGAAATGCAAGCTGGTTCAATTGGTTCTCTTTGCCCAAGTTGTAAAGCAAGAATGTCGGGCCAGTTTCTGTAG
Protein Sequence:
- >Dca4006.1|Dianthus_caryophyllus|C2H2|Dca4006.1
MASATVGPSPPPPPSDHLTVESIPTVDLRRLTQSELAALALCSSRAVDLRRCDDVVIPKIDRSVFNESAGSRKQTYSRLRLAPRNNPNLIDSAAAAAKPRRVTPEPPVLDAEHAENLRIVSLFKSLFNLSNGVDVSSNDDVENHDGCGGGGGDELALVPVSVTYCDTVPGDKKRKRGRKPKSETSLEMTVFEEKKAEDEAAEVEVMEEEEEEEDEETAEEVAAVTVEEVQRRWEESEKELVNKNGVVVNLAELAKAEDPYTVELKRLTEGKETAEELLGFVNDLEGEWGSRRKKRKIVDANLIGDFLPNGWKILIAIKKKQGRAWVFCRRYVRLFLPSFRLSSPNGRYFVSCKEVSSYLISLTGSQEPKEQPAVEDPDITAVDVASKNAVETETKVEHQAIPDSSLFKDREDRHMHLNISPNLENRVTPSKDVQLGEVHELSTSALKCHKCSTPFNEKDELLKHLISCHKRKRRKAGVYIENDDLLKDGKYECQFCDKVYLDRGSYFGHVGIHVKNYLKSAGGSSSVKAKQKTFKPVSIGEVSLSVSETLGSTELIAESGAGTQNMLGNGELNNDCKEKKITAPDAERLSENEKNDHSSYTRPMELNAAQTDKTLDCESSGKQEAADHIANKNTTEVDCTNKNTTEVDCPGSDKVVLDYSDNYQEIISSEFVSPEAIERPPVVAENSEAYLSSDSKLSDFGADSSFVTENVLETEERLTSEFDLAAGNEGKSSNQSFAKCYLVNNPVERYCYDEEVNVMHHQGLTEVSGSGHIDVDMVDEDDIKGLESMEESSAVPFTAEESCGVIMNKTENIESKVSTLSDDQQTKTLMVNKRHDFADLVNETEVDLSSFENTELTDDYERIIQERHCESNVQFYSKDNVSNYSSNEAVRGSNVKMVQPSGVRDFQQFKHSCSTENNTGEVLNKQGEEHTGNLFFQSRSRDSHLDTTDITNTDQSHNHVPDVLRSFDSYVDDKQAQVSKSLFYALSMNEHSREVAMNDVGNVSTSTTTMHLPELEKVDSSRSSNLLLDFNNITEMNGNFLSSAQHGAVPEETSPFQLWGQQSNGLVDSQTKVYGGGSTFLQQARASQNNSLNLVGHQRQSTEGYNLNEVCMNEQRYGQRNKLGVFSRNNEARTEGISHGNALNLAGYQQQCDLGYNLNKPCISQQSYGVQHTESGSYNHLNQARQDRVAYGNSLSLASVQQCDSRYSLNKTRDQQPVDTGYSLNKGYVDSRDRDLMIGFGNSGGRRNQTGTTDFLWGSNDGSILPGGLVDSSSSQAQSSGSFQPFDFLSDKSGNDLYNANGKFDNMSSFEGLRSSVEPMEFSFMTPQESNPQLEHPKVLQYNTEINQSFGSWDQKTTTLPNMMPNHVVTVMCVWCGNEFHQDSLSCEMQAGSIGSLCPSCKARMSGQFL