Information report for Cotton_A_14012_BGI-A2_v1.0
Gene Details
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Functional Annotation
- Refseq: XP_017641355.1 — PREDICTED: protein indeterminate-domain 7-like
- TrEMBL: A0A2P5X5K2 — A0A2P5X5K2_GOSBA; Uncharacterized protein
- STRING: Gorai.009G044300.1 — (Gossypium raimondii)
- GO:0005777 — Cellular Component — peroxisome
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Cotton_A_14012_BGI-A2_v1.0|Gossypium_arboreum|C2H2|Cotton_A_14012_BGI-A2_v1.0
ATGCATGTAACATTACTGTCTTCTGTTTGCAGATATGTTCATTCACTCAATATAGGACATAACTTGCCATGGAAACTAAAGCAAAGAACAAAGAAGGAAGTGGTGAGGAAGAAGGTATATGTATGTCCAGAGACAACATGCGTGCACCATCACCCATCTAGGGCTCTTGGTGACCTCACGGGAATCAAGAAGCACTTTTGCAGAAAACATGGGGAGAAGAAATGGAAGTGTGAGAAGTGTTCAAAGCGTTATGCTGTTCAATCTGACTGGAAATCTCATTCCAAAATTTGTGGCACCAGAGAGTATAGATGTGACTGTGGGAACCTTTTCTCCAGGAGGGACAGTTTCATCACTCACAGAGCGTTTTGCGATGCTTTAGCTGAAGAGACTGCAAGAGCAATTACAGCTGCAAACCAACCTGGTTCTTCTGTTTCACACATAAATATGACCAATCTAGAATCCCAACCCCTACTCCATGGCTATGCCCTCCATGCACCATCTTTGAATAGAGACCAAGATCAACGTTTCAATGCAAGAGTAGAAGCTGCTGGGCCTGATTCTGGTCCCCCCTCAATAAATCTTTCATCATCACCATTTCTTTTAGGCCACCCACTGCTACATGACGAAAACCCTAGCCAAAACCCTAGTTCTACTACACTTCTTCCATTCCAAGCTCCGCCAGCTTCTCCACACACGTCTGCAACCGCACTCCTACAAAAAGCAGCTCAAATGGGGGTGACTTTGAGCAAGCCCTTACAATCACCAGTAGTATCCATGCAAAGACCTTACTACTACCACCACCAGGCTCACATGTGTGGTTCCACAACTTTTGCCACGTCTAGAGCTAGGGGTTTGTCGGCACGTGAAGAGTTGGGAAGTAAGTTCACCCATAGTTTGTCATCTTTTGGGAATAAAGCTGGTGTCACCCCTGGTTTCTTGGAACAGGTGGCTAATGCAACAAAGAGTAGTGCAGTTGCTGGAGCCGGTGCTGCAGCTCCTAGTTCTCTACTCCATGATATGATGACTTCTTTATCTTGTACAAGTGAGCTAGAAGGGTCTTCATCTTTTGAACAGTCTTTCAATGGGACATGGATCACCAAAAGAAACAGCAATAATTTTCAAGAAAATTATATCGATCGTCGTAATTTCTCAGAAACAAAAGAATCCCAATCATGCAGAAGTGATAATCATGAAGGTAAAGGAAGTGGTAGTAGTAGTAATAACATAGGAGGGAACGATAGGTTGACAAGAGATTTCTTGGGCCTTAAAGCTTTCCCACATACAGATATCCCCAACTTAGTAGGGCTTAATCATCACATAAATTCTTCTTCAGCATATGGGCAACCGAATCAGCACAGTGAAACACCATGGCAAGTAGAAGAGCGGAGAATTGTAATCCGAAACAGTCATGGGGAGAACCTTGTTGGAATTTTACTCGAAACTGGTTCTAAGGATCTTGTCATCATTTGCCACGGTTTTCAATCCAAAAAGGAACGAATACCCATGGTGACTCTTGCCACTACTTTGGGAAGAGAGGGAATCAGTGCTTTCCGCTTTGACTTTGCTGGGAACGGGGAAAGTGAAGGTTCCTTTATGTATGGTAACTACCGCAGAGAAGCCGAAGATTTACGAGCTGTCGTCCGACATTTTCGCAAGAACCAACGTCTAATAACTGCAATTGTTGGCCACAGTAAAGGGGGGAATGTGGTGCTTCTCTATTCTTCAAAGTACAATGATGTACCCACCGTCATCAATATTTCCGGCCGGTTCCATTTGGAGAAAGGCATGGAAGGTCGATTGGGTAAAGATTTTTTACAAAGAATCAAGCAGAATGGGTTTATTGATGTTAAGAATAGAGAAGGACAGTTTGAATATCGTGTAACTCAAGAAAGTTTGATGGACCGATTAACCACCGACATTCGTGCAGCATGTCTATCGATTGATCAAAATTGCAGGGTATTAACCATTCATGGGTCCATGGATAAAATTGTACCAGCCAAAGATGCCCTGGAATTTGCCAGGTTTATACGAAATCACAAGCTGCACATAATTGAAGGAGCTGATCATGAGTATACTGCACACCAGGATGAGTTAGCTACAGTTGTGCTCGATTTTGTAAAGGCAGTTCGTGAAGACAGAAACTCCGCTGAACGTCTGCAATCATGCGAGAGAGCAGTTAATTTCATCAAAGCTCGAATCTGA
Protein Sequence:
- >Cotton_A_14012_BGI-A2_v1.0|Gossypium_arboreum|C2H2|Cotton_A_14012_BGI-A2_v1.0
MHVTLLSSVCRYVHSLNIGHNLPWKLKQRTKKEVVRKKVYVCPETTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKSHSKICGTREYRCDCGNLFSRRDSFITHRAFCDALAEETARAITAANQPGSSVSHINMTNLESQPLLHGYALHAPSLNRDQDQRFNARVEAAGPDSGPPSINLSSSPFLLGHPLLHDENPSQNPSSTTLLPFQAPPASPHTSATALLQKAAQMGVTLSKPLQSPVVSMQRPYYYHHQAHMCGSTTFATSRARGLSAREELGSKFTHSLSSFGNKAGVTPGFLEQVANATKSSAVAGAGAAAPSSLLHDMMTSLSCTSELEGSSSFEQSFNGTWITKRNSNNFQENYIDRRNFSETKESQSCRSDNHEGKGSGSSSNNIGGNDRLTRDFLGLKAFPHTDIPNLVGLNHHINSSSAYGQPNQHSETPWQVEERRIVIRNSHGENLVGILLETGSKDLVIICHGFQSKKERIPMVTLATTLGREGISAFRFDFAGNGESEGSFMYGNYRREAEDLRAVVRHFRKNQRLITAIVGHSKGGNVVLLYSSKYNDVPTVINISGRFHLEKGMEGRLGKDFLQRIKQNGFIDVKNREGQFEYRVTQESLMDRLTTDIRAACLSIDQNCRVLTIHGSMDKIVPAKDALEFARFIRNHKLHIIEGADHEYTAHQDELATVVLDFVKAVREDRNSAERLQSCERAVNFIKARI