Information report for CCG027244.1
Gene Details
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Functional Annotation
- Refseq: XP_011006103.1 — PREDICTED: uncharacterized protein LOC105112197 isoform X1
- TrEMBL: A0A2I4KKX1 — A0A2I4KKX1_POPTR; C2H2 family protein
- STRING: POPTR_0014s14320.1 — (Populus trichocarpa)
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >CCG027244.1|Populus_euphratica|C2H2|CCG027244.1
ATGACAGAGGGTAGGATGGCCGGGGCATGTGCCGTTAATCATGTCGTCACGGTCTCTCACTGTGTTCCGTACTGCATGTCAACGCAGACTTACACTCTCTCTTTCTCCAGCTCTTGGAAGATGGATAACCAAGATCCCAGAAAGAACCCTACGCACACACCAGGGCATGAGAGCCATGGAGTTTATGTCTGTCACAAATGTGGGTGGCCCTTTCCAAACCCACATCCAAGTGCAAGACACAGGCGTGCACACAAGAAGATCTGTGGGACTCTTGAAGGATACAAGTTTGTTGACTCTGAGGAGACTCCACTCTCGGCCCTTTCTGACGATGACCGTGGTTCTGATGAAGATCCTAAAACCCCTAGTCCCAAAGGTTTGGAGAGAGGTATTAACGAGAGGGGTACTGGTGGAGTAGGGAGCAGATCGAATAGATCAGAAGATGATGTTTTTACGGATGCTATCGCGGAATTTCCTGAAAGCGGATCTAGTCCGGTGACTGGAGAGCATATAAGGGATGTTAAAGAACCAGGGATTAACCTGGAAATCAATAAAGCCACTGCTCAATCGTCCGAGGATGGTTCAATTACTGTTATCAGTCCACCTCCAAGCAATTCAGCTGACCACATCCAAATGCAAAGTACTGAAGTTCCAGTAACTAATCTGCCGGGAAGTGCTCAAGAGTCCTCCCTAGATCATGGCTCGAATGCTACCATTGCCTCCACGACCAGATCTTTAACAGATTGTAGAGGTGAAGAATCTGACTTTGAGCATAGCCATGATAACGGAAGTTCTGCATGGGACTCAATCCCCATCAAACCTGAAACACAAACAGATGCATCACAAGAGAATAAGAAGAGTGGCACTGTCGAGGATTTGCCAGATACTGATGCAAAAGGAAATGAAGAAACTAAATTAGATAAACAGCTACTGGATGTAGTGGTTTCAACCGATGACAATGCAGAGGATGCATCTGAGGTGGCATCTGAGTCACAGAAGATGGAGGATGTAACTTCACAGCCTGTGCCTGCTGCAGAAGTCCTTCAATTGAAGGAAGGAGGCTACACTGATGATTTAGCCTCTGGAATGTCTTTAAATGATCTCTCCCCTGAAGTTAATTTGGTTGAACCTGCGCATTCTTCTATTTCCACTGCTCAGATCGAGGGGGATACTCAAGAAATCGACTCTGCTGTTTATGTAAATTCAGCTGTGAGTTATGATAATAAGGGAGAAGGAAATGGAAATATGCATGTGCTTATACTTCCCAATGACATAACTGTAGTTGCTGATGCTGAGAACATGGTTAAAGGTTTTAAAGACCTTGAAGGATGGAAATTGCCCCAGCCTGTGAACATGGATTCGTTTGAAGTATCTAACAATGTTAAGGATTCTGACCTTGAGAACAATCCTCAGGGTTTTAACTCAAAGCCATTGACTGAGGACACCAAAGTCTCTGCATCCAATATGCATGTTTTGAATGATAACCTTGAACCAAAAGATGGGACCAGCCAGCATATTGTTGAAGAATTGCCTGATGAAGCAGAAGCTGATGTGGCCCAGAGATCAGAAGTTAGTGTAACAGATGTTGTGACAGGTGACTTGGAGAAGAGCATTTCTGTTCACTCTACTGTAGAAGATGTACCTCGTGATCATTGTGAAACTTCATCTCTGACGAGTTCTGTAGAGCATGCTACAAAAGTCATATCTGATACTAACACTGTGGTTGTGCCAATGGATGCTGAAGTCAGGCGGACAAACTTAATTGGCATGGATGATACTGGTAATGATGAAAAGGATAAAATTGAAAGTTCTGAAGTAGGAGAAAATGACAAAAACAAAAGAAATGCAAAGGAGAGTTTTGCAGAAAACAGGATACCAACTTCTAAACATGCTAGTATTTCCTCTGAGCAAGCTGATCAAAGGAACAGCGAACTTGGAGATGTCAAAGCTGCTGGTCTTGAAGAGGGTAAGATAGAAAGATGCAATGTGTCTGAAATTGTAACAGAAGGTGATTCTGTATCTGGATTGGGGGAGGAAAATCTCTTGAGGGAGCCAAAAACAACACCTGAATCTGCTGTAAATGTCGAATCCTGTTTTACCTTGGAGAATGATATTAATGTGTGTGAGGGAAAGTTGCCACAACTTGCTAGTATTCCCTCTGAACAAGCTGATCAAAGGAACAACGTACTTGGAGATGTCAAATCTGCTGGTCTTGAAGAGGGTAAAATAGAAAGATGCAATGTGTCTGAAATTGTAACTGAAGGTGATTCTGTTTCAGGATTGGGGGAGGAAAATCTCTTGAGGGGCCCAAAAACAACACCTGAATCTGCTGTCAATGTCGAATCCTGTTTTATCTCAGAGAATGATATTAATGTGTGTGAGGGCAAGTTGCCACAACATGAACACACGGATATAGGTGGAGATTTGGATCCTCAGGAAAGCAGAAAGGAACCTGAAAGCAATGGTATGGCCAATCAACAAGTTGAGCGTGCTGGTGAAGTTAGTGCAGCTGCTGAATCAGATAGTGGTGGAGATGCTGAGGTATTATGGAAGTCTTCTGAAGACAAAATGGCGAGGGAGCCTCTAGTTTCTCCTTCAGAACCTTCATCTTCCCTTCAAAATTCTTCCCCTGTTGCAGATAATCTGGCCATAGATGTTCTCGGAGTTGCATCTGGGAACACAACTGAGTCTTTGCCTCATGAAGGTGATAATAACTTAGTTGCACAACAGGTTGTTGCATCTGCTACTGACTTTTCAGTTGATTCAATTAGCCAAACTGATAGTTTGGAAGGTCACTGGGGTTCCGTTTCAGTGCTTTCTACCATATCGGATATACCGGCTATTCTTGATGCTGAGCCTTTGCCATCAAATGGTTCCCAAGCATTATCAGAAGCAGAGAAAGCCACCTTGAAGAAGCCGATAGCTGCTTCTGAGACAGAACATGCTGATAAATCAGATATTTTTGATCCCCCATCATTCATGACACTGGTTGAACCTAGAGATGTGGTTAACCAGAAAGGTGCTTCATTTGAAAGCCAGACAACACAGGACCCGCAACAGCCAAAAGCTGCTTCTGTACAAGCTGGTTGGTTTCCTTCCATCACCAATGTTTTGAATGAGTCACAGGGGAGAAAGAAGAATGAAGAGATTATTGCCAAGGTCACAAACTGGAGCACCGGGGATCAATGCCCTTCTCTGAGGAGCCCACAACATGCTCCTTTGAAGAGCCTTTTGGGCGAGGCAAGCATGGAAACCAAATCCAAGAAACTAAATGCTAAGGAAATCCCAGTTGAAAAAGATGGCCCTGCAGCTAAAGATAACGGTGCTTTGCCTAAAACAGTGAGCTCCATTCTGGCTCCCCAAGAACCTGTAGGGGAGCCTGCCAAGGAGGAAGAGAACGCATGGAGTTCTCCAGCAAGGTACCCTGCAGATATTAAGAGAGAGAAGAGGAAAGTCAAGGGAAGACCATACTGGGCACAATTTGTTTGCTGCTCGTCTGTAAATTAG
Protein Sequence:
- >CCG027244.1|Populus_euphratica|C2H2|CCG027244.1
MTEGRMAGACAVNHVVTVSHCVPYCMSTQTYTLSFSSSWKMDNQDPRKNPTHTPGHESHGVYVCHKCGWPFPNPHPSARHRRAHKKICGTLEGYKFVDSEETPLSALSDDDRGSDEDPKTPSPKGLERGINERGTGGVGSRSNRSEDDVFTDAIAEFPESGSSPVTGEHIRDVKEPGINLEINKATAQSSEDGSITVISPPPSNSADHIQMQSTEVPVTNLPGSAQESSLDHGSNATIASTTRSLTDCRGEESDFEHSHDNGSSAWDSIPIKPETQTDASQENKKSGTVEDLPDTDAKGNEETKLDKQLLDVVVSTDDNAEDASEVASESQKMEDVTSQPVPAAEVLQLKEGGYTDDLASGMSLNDLSPEVNLVEPAHSSISTAQIEGDTQEIDSAVYVNSAVSYDNKGEGNGNMHVLILPNDITVVADAENMVKGFKDLEGWKLPQPVNMDSFEVSNNVKDSDLENNPQGFNSKPLTEDTKVSASNMHVLNDNLEPKDGTSQHIVEELPDEAEADVAQRSEVSVTDVVTGDLEKSISVHSTVEDVPRDHCETSSLTSSVEHATKVISDTNTVVVPMDAEVRRTNLIGMDDTGNDEKDKIESSEVGENDKNKRNAKESFAENRIPTSKHASISSEQADQRNSELGDVKAAGLEEGKIERCNVSEIVTEGDSVSGLGEENLLREPKTTPESAVNVESCFTLENDINVCEGKLPQLASIPSEQADQRNNVLGDVKSAGLEEGKIERCNVSEIVTEGDSVSGLGEENLLRGPKTTPESAVNVESCFISENDINVCEGKLPQHEHTDIGGDLDPQESRKEPESNGMANQQVERAGEVSAAAESDSGGDAEVLWKSSEDKMAREPLVSPSEPSSSLQNSSPVADNLAIDVLGVASGNTTESLPHEGDNNLVAQQVVASATDFSVDSISQTDSLEGHWGSVSVLSTISDIPAILDAEPLPSNGSQALSEAEKATLKKPIAASETEHADKSDIFDPPSFMTLVEPRDVVNQKGASFESQTTQDPQQPKAASVQAGWFPSITNVLNESQGRKKNEEIIAKVTNWSTGDQCPSLRSPQHAPLKSLLGEASMETKSKKLNAKEIPVEKDGPAAKDNGALPKTVSSILAPQEPVGEPAKEEENAWSSPARYPADIKREKRKVKGRPYWAQFVCCSSVN