Information report for CCG012550.1
Gene Details
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Functional Annotation
- Refseq: XP_011024091.1 — PREDICTED: formin-like protein 5
- Swissprot: G3CHK5 — ELF5_PONTR; Protein EARLY FLOWERING 5
- TrEMBL: A0A2K1XKA6 — A0A2K1XKA6_POPTR; Uncharacterized protein
- TrEMBL: A0A385JIQ4 — A0A385JIQ4_POPTO; Early flower 5
- STRING: POPTR_0015s10190.1 — (Populus trichocarpa)
- GO:0006396 — Biological Process — RNA processing
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >CCG012550.1|Populus_euphratica|C2H2|CCG012550.1
ATGAAGACGACAAAAGGAGGCAAAGTTATGAACCCCACGGATGCTTACCGTAAGGAGCTTCGTAAGAAGGAATTAAAACGGAACAAGAAGGAAAGAAAGAAGGTGAGAGAGGTGGGGATTTTGAAGAAGGATCCTGATGTGATCAAGGAGCAAATAGAGAAGTTGGATTTGATGAAGGCTGATGGTGCTTTGGACAAAGCAAGAAAACACAAAAAGAGACAACTTGAGGATACTCTTAGCCTTGTTATAAAGAAGAGAAGGGAATATGAAGATAAAATGAAGGAGAAGGGTGAAACCCCTGTGATGTTCAGTCATTTGGGCCCTCTTCGAAGAAGGACATCTGCAGAAGAAGAAGAAAGAGCCAGGCATCCAAAGCCTGAAGACTCTGTGTACTATCACCCTACTATGAATCCTACTGGAGCCCCACCACCTGGAAAGCCTCCCATGTATAAATCATCCATAGGACCCCGGATTCCTTTATCTGGTGGTTCATCCTCCACAGCTGAATCAGAGGATGCTGCTTTAGTGGTACCTCCTCCCTTGCCAGAGAGCGGGGAATTAGGCCCCAGTGATGGCTCTGCTATACCTGCTTTGTTGCCCCTACCTCCTCCACCTCCATTGCCACCAATGCCTGCAGCTCCAAGCTTGGGCATGTCATTACCCCCACCCCCTTTACCTCCACCTCCTCCAGGTCCTCCTCCAAACGATCAGGTTTCAAGTCACATCTCTGTTCCCCCACCTCCACCCCTCCAACAGTCTGCTCAACCGCCACCACCACCTGGCACAAATGAAAGTGGGAGTGAGACCACTATATCCGCATTGTTAGATGAATCATCCTCCAAGGATAATGCTCAGGTACCTGCTTCACTCCCTCCACCTCCTCCAATTGCAATGCAGCTGAAGTCTGCTAATAGTCTTTCTGAAGGCACTTCATCCGAAGCTGATGCCAATACTGCAGCAACTATGGATAACCCTAAAATGGTTCCCCCCCCACCTCCTCCTAGGCAACAACCTCTAGCACCCGGACAAGCCTTGACTCCAACTTTACAGCCTGATGTTTTACCCCCAGGCATATCACGTTTCCCCCCACCTCCACCTCCGCCAAATGTGCGGCCACCATTATCTTCTTCTGGAATTCCTGGACAAGTGGCTCCTCCAGGGGTGATGCTCCCATTAATTCCCAGACCTCCATATGGTCCTCCACCTGGACCTCCTCCAATGATGAGACCACCTCTACCACCTGGTCCTCCTCCATTCTTTCAAGAAGATGCTGCAAATAGGCCACATGTTCCTCAGAAACCATCTTATGTAAAATCTGCTGCATCCACTGTTGTTAAAAGGCCTCTAGCGCAGCACACTCCAGAACTTACAGCTATGGTTCCTGCTTCAGTTCGAGTGAGGAGAGAGGCTGCTATCCCTAAACCAAAACCAAAGGCTGTAACCTCGACAACAGCAGTAGCCACCAGGCCAGCAGCTCCAACCACTGTGAAGCCAGAGTCAACTAACTCATCATCAGCTCCAAAGTCTAAGAGCATTGATGACTCATACACGGCCTTTTTAGAGGACATGAAAGCACTAGTTTGGTTTCCGTTTACTCTTCATTTTCAACATTTGACCGAGGATGTTGGAGAACATGTGGCTGCGAGAACGTTTAACCAAGAAGAAGGGCATGCACACAAAGTACATTGCTCTAGAGAAAGAAGTAGGGCTGCCTGGCAAGCTATAGAGGAGTATTTGATGCCATTTGTGGAACGTGAGCAGTATCAGATTTCGAGTAAGTGTAGGCTTCATCCAAGCAATGATCTATTTAGAGACCAAGAGGAACACAAAATTCATGTGGACATAAATGAATGGAAGTGTGGATACTGTAAAAAACATTTCCGTGCTGAGAAGTATCTTGATCAACATTTTGACAACAGGCATTACAATCTCCTTAATATTAGTGATGGCAAGTGCTTGGCTGATTTATGTGGAGCTTTGCATTGTGATTTCATGATGGATTCCAAGTCAACTAAGACCAAGTGCAATCCTGCTGCTGTTGCAAAGAATCACCATCTTTGTGAGAGTCTTGCAGATAGTTGCTTTCCTCTCAATCAGGGCCCTTCTGCAAGTCGACTGCATGAATTGTTTTTGCACCAATTTTGTGATGCTCACACTTGCTCAGGGAAAAGAAAACTTTTCCCTAAGGGTGGCAAGAAGAAAACAAGTGTATTCTACCTAGCTATTTCAATTCTGACTATGATGATGATCCCCCTATTCTATCTCATTGTTTATTTGCATCAATGTGAAATGAGGAAAGGAACCCAAGAGCTAAGGAGAATCTCAAAAGTTGGAAGGAAGACGAAGCCGTCATAG
Protein Sequence:
- >CCG012550.1|Populus_euphratica|C2H2|CCG012550.1
MKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPDVIKEQIEKLDLMKADGALDKARKHKKRQLEDTLSLVIKKRREYEDKMKEKGETPVMFSHLGPLRRRTSAEEEERARHPKPEDSVYYHPTMNPTGAPPPGKPPMYKSSIGPRIPLSGGSSSTAESEDAALVVPPPLPESGELGPSDGSAIPALLPLPPPPPLPPMPAAPSLGMSLPPPPLPPPPPGPPPNDQVSSHISVPPPPPLQQSAQPPPPPGTNESGSETTISALLDESSSKDNAQVPASLPPPPPIAMQLKSANSLSEGTSSEADANTAATMDNPKMVPPPPPPRQQPLAPGQALTPTLQPDVLPPGISRFPPPPPPPNVRPPLSSSGIPGQVAPPGVMLPLIPRPPYGPPPGPPPMMRPPLPPGPPPFFQEDAANRPHVPQKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRREAAIPKPKPKAVTSTTAVATRPAAPTTVKPESTNSSSAPKSKSIDDSYTAFLEDMKALVWFPFTLHFQHLTEDVGEHVAARTFNQEEGHAHKVHCSRERSRAAWQAIEEYLMPFVEREQYQISSKCRLHPSNDLFRDQEEHKIHVDINEWKCGYCKKHFRAEKYLDQHFDNRHYNLLNISDGKCLADLCGALHCDFMMDSKSTKTKCNPAAVAKNHHLCESLADSCFPLNQGPSASRLHELFLHQFCDAHTCSGKRKLFPKGGKKKTSVFYLAISILTMMMIPLFYLIVYLHQCEMRKGTQELRRISKVGRKTKPS