Information report for CCG008222.1
Gene Details
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Functional Annotation
- Refseq: XP_011014313.1 — PREDICTED: zinc finger protein NUTCRACKER-like
- Refseq: XP_011014314.1 — PREDICTED: zinc finger protein NUTCRACKER-like
- Refseq: XP_011014315.1 — PREDICTED: zinc finger protein NUTCRACKER-like
- Swissprot: Q9ZUL3 — IDD5_ARATH; Protein indeterminate-domain 5, chloroplastic
- TrEMBL: U5G1I0 — U5G1I0_POPTR; Uncharacterized protein
- STRING: POPTR_0010s10950.1 — (Populus trichocarpa)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >CCG008222.1|Populus_euphratica|C2H2|CCG008222.1
ATGGCTGCTTCTTCTTCATCGGCGCCTTTTTTTGGAATTAGGGAAGAAGAACAAAACCAGCAGATGAAACAACAGCATTCCTCAACTCCAACTTCATCTTCAGCTCAGGCTCCACCGCCACAGAAGAAAAAGAGAAACCAACCTGGAACACCAAGCAAGTATCACCAATTTTATCTAAAGATCGATCTACCTAATCCAGACGCAGAGGTGATAGCACTATCTCCCATGACCCTAATGGCAACAAACAGGTTCATATGTGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAAAATCTACAGCTCCACAGAAGAGGACATAACCTGCCTTGGAAGCTAAAGCAGAAGACTACAAAAGAAGTGAGGAGGAAGGTTTATCTGTGCCCCGAACTCACATGCGTCCACCATGAGCCTTCTAGAGCTCTTGGTGATCTTACTGGAATCAAAAAGCACTACTCAAGAAAACATGGCGAGAAGAAATGGAAGTGTGAGAAGTGCTCAAAAAAATATGCTGTCCAGTCTGATTGGAAAGCCCATTCTAAGACTTGTGGCACTAGAGAATACAGATGTGACTGTGGCACTCTCTTCTCAAGGCGTGACAGCTTTATCACTCACAGGGCATTCTGTGATGCGCTGGCTCAAGAAAGTGCAAGAAACCCTCCTACCAACTTGAACACAATTGGAAGCCATCTGTATGGAAGTAGCAACATGACCTTAGGCTTATCTCAAGTAGGAACTCAAATCTCCTCACTACAAGACCACAACAACCAGTCTACTGACGTTTTACGACTTGGTGGCGGTGGTGCGCGGACTGGACAATTCGATCATCTTCTCCCTTCTTCAATTGGTTCATCGTCGTTTCGACCTCCACAGCAAATGCCCTCACCTGCTTTCTTCATGCAAGAAACAAACCAGAATTATCATGATGAAAACCAATCTCAGCAAGACTTGTTGCAAAATAAGCCGTTCCACCATGGACTGATGCAATTTGCTGATATTCACAACACCACAGGCAACCCTCCCTCTGCTGGCAACCTGTTCAACCTCAGCTTTCTTTCCAATAGTAGCACCGCAAGCAGCATTTCCAACAGCAACAATGCAAACAATTCCAACAGCAACCTACCAACTTCAGGATTGCTAATGCCCAGTCATTTCAACAACCAAAATGGTGTTGGTGGTGGTGAAGGGAGTAATGTCTTCTCCAATAATGTAATGGGTAATCAAATGACCTCCGGTGTCCCTTCTCTCTACAGCTCGTCAGTTCAGAATGATAACATGGCCTCTCATATGTCTGCTACTGCGCTGCTTCAAAAGGCTGCTCAAATGGGTTCAAGTTCAAGCAACAACAGCGCCTCATTACTTAGAAGTTTTGGTAGAGACAGGCCGCTTGTTGGTGGGAACTTTAGTGGCATGTTCAGCGAAAACGAGAATAATCTTCATGACCTAATGAACTCATTTGCTCCTGGGAATTCCTCCATGTTTGGTCCCGGACATGCACAAGAAAACCCCTACGGTGGATATACTGCAAGCAGGACAAATTTGGAGCAAGAAAAGCAGCACCACGGCCCAAATTTTGGCAACAGCAATATGGATGAAGCAAAGTTGCACCAAAGTCTCAATGCAAGCATTGGTGGATCTGATAGATTGACAAGAGACTTTCTTGGTGTTGGTCCTCAAATAGTGAGAAGCATGAGTGGATCGTCAGGGTTTTCACAGAGAGAAAAACAGCAGCAGCCACAGCGTCAGCATCATGGCATGGATATGGGTGGCTCCTCCTTGGATTCAGAGAGACATAACGCGAATATTTCTGCGGCGCCGACAAGCCAATCTTTCGGAGGAAATAGGAGTTTTCAGTGA
Protein Sequence:
- >CCG008222.1|Populus_euphratica|C2H2|CCG008222.1
MAASSSSAPFFGIREEEQNQQMKQQHSSTPTSSSAQAPPPQKKKRNQPGTPSKYHQFYLKIDLPNPDAEVIALSPMTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVRRKVYLCPELTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARNPPTNLNTIGSHLYGSSNMTLGLSQVGTQISSLQDHNNQSTDVLRLGGGGARTGQFDHLLPSSIGSSSFRPPQQMPSPAFFMQETNQNYHDENQSQQDLLQNKPFHHGLMQFADIHNTTGNPPSAGNLFNLSFLSNSSTASSISNSNNANNSNSNLPTSGLLMPSHFNNQNGVGGGEGSNVFSNNVMGNQMTSGVPSLYSSSVQNDNMASHMSATALLQKAAQMGSSSSNNSASLLRSFGRDRPLVGGNFSGMFSENENNLHDLMNSFAPGNSSMFGPGHAQENPYGGYTASRTNLEQEKQHHGPNFGNSNMDEAKLHQSLNASIGGSDRLTRDFLGVGPQIVRSMSGSSGFSQREKQQQPQRQHHGMDMGGSSLDSERHNANISAAPTSQSFGGNRSFQ