Information report for Cc10_g10570
Gene Details
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Functional Annotation
- Refseq: XP_027149240.1 — uncharacterized protein LOC113749628
- TrEMBL: A0A068UVV8 — A0A068UVV8_COFCA; Uncharacterized protein
- STRING: VIT_18s0001g03670.t01 — (Vitis vinifera)
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0003950 — Molecular Function — NAD+ ADP-ribosyltransferase activity
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv1_000240_ccns.t1
- Citrus sinensis: orange1.1g014111m
- Cucumis melo: MELO3C003044P1
- Cucumis sativus: Cucsa.248540.1
- Daucus carota: DCAR_017382
- Fragaria vesca: mrna11117.1-v1.0-hybrid
- Malus domestica: MDP0000822664, MDP0000827249
- Nicotiana tabacum: XP_016500805.1
- Populus trichocarpa: Potri.002G087500.1
- Prunus mume: XP_008233905.2
- Prunus persica: Prupe.1G503600.1.p
- Pyrus bretschneideri: Pbr008168.1, Pbr033513.1, Pbr008516.1
- Ziziphus jujuba: XP_015885618.1
Sequences
CDS Sequence:
- >Cc10_g10570|Coffea_canephora|C2H2|Cc10_g10570
ATGTACAGAGACAGCTCTGGCCCATATCGCAATCTTTACACTTCCTTTTCAATAATGGCTAAAAGCAGAAATACCAGGAAACAAACAAAAGAGAACAAGAAGGAGATTAATCAGAAGAGAAGTCCTGAGCAAAAAGAGAAACCACATTCATGGGCTGTCGTGAGAAGCCTCTTCACCTGCAAACACCTCCAAGCACAAATGCAGCAGCAGCAACTACAAAAGGCGGAGCAGCAGCAGCAGAAGAAGAATTCAGAAGAGAAGAAACAGCAAAAGGAAGAACAAGGGAAGCAGGAAAAACAAGTGCCAGATATGGAGGAAAGCCACAAAAAGTGCAAGAAAATAAAGTGTTCAGGCTCACTATGTAGCAATACAAAAGTCATGCATAGGCCTGAACCTGTGTCACCTGAGGATCTAAAGAAAAGGGCTTCATCATCAATGGGGGGCTCATTCAACACTGAAAATGTTTCTTGCAGATCAATCAAAGTTACTCTCAATGATCTCAATGGGGCTGTGGTTTCTGCTTCATCTTCTTCTTCTTCAATGTTTGCTGCTTCTACTACTAATTCTCCTTTAATTACTGGATCTTTCAGAGGAATGCCTTTCAGGAAATTTTCCAGCTGCTATGAGTGTAGAATGGTGGTTGATCCTGTTCTTGGGATGACTAGAGACCCTTCTTTAAGATCTACAATTTGTTCATGTCCAGAATGTGGTGAAATCTTCATGAAAGCTGAAAATTTGGAGCTTCATCAAGCTGTGAGGCATGCAGTGTCTGAATTGGGACCTGAAGACACAAGCAAGAACATTGTGGAGATCATATTTCAATCAAGCTGGCTAAAGAAACAGACCCCAGTATGCAAAATAGACAGGATTCTGAAAGTGCACAATACTTCCAAAACAGTCAGCAGATTTGAAGAATATAGAGATTCCATCAAGGATAAGGCTACTAAGCACACAAAAAAACATCCACGCTGCATTGCAGATGGCAATGAACTCCTGAGGTTCCATTGCACCACTTTTATGTGCTCACTAGGACTAAATGGCTCATCAAACCTGTGCAACTCAATCCCAAACTGTAATGTCTGTAGTATAATTAAAAATGGTTTTAAGGTCACCGGAGAATTTTCTTTGGCCGGAGAGGTCACCGGAAAAGCTATTCTGACGACTGCAACAAGCGGAAAAGCCCATGACAATGCAAGGGTTGTGCTAGAGGATGACAAGAGAGCAATGCTGGTTTGTAGGGTCATTGCTGGAAGAGTGAAGAGGAACTTGGAGGGAAGTCTTGAGGAGTATGATTCTGTGGCTGGAGCTGCTGGAGTTTATTCTAATTTAGATGAATTGTATGTTTTTAATCCTAAGGCTATATTGCCTTGTTTTGTTGAAGCAACTAGGATTCATCCCACCGATGGAGAGCTGGTCACATCAAACACAAGCTCAGGCGATGTTGTAGCTCGTCGGCCAAGAGGCCGGCCGCCTAGCTCCAAAAACAAGCCTAAACTCCCGGTGATAATCACTCAAGAGAGCACCAACACGCTCCGAGCACATATATTAGAGGTCAGCAGCGGCTGTGATGTGTTTGAATTAGTTGCAACATATGTTAGAAAAAGGCAAAGAGGTATTTGCATATTGAGTAGTAGTGGCACGGTCAACAATGTGAGCTTGAGGCAACCGGCTGCTGCCGGCTCAATCATGACGTTACATGGCTGGTTCGAGATTTTATCATTGTCGGGCTCCTTCCTTCCACCCTCAGCTCCACCGGGTGCCACCAATTTGACCATATATTTGGCTGGTGGATACGGTCAAGTTGTTGGAGGAAATGTTGTGGGAGCTTTGATTACTTTTGGACCTGTGATTGTTATTGCTGCTTCTTTCAGTAACGTAGCATATGAAAGACTGTCTTTGGATGAAGATGATCACTCACTTCAGGCAGTGGCAGTAGTGGTGCTATTGCTGGTGGCTCAAATAATAAATTTTCTGATCCATCTTTAA
Protein Sequence:
- >Cc10_g10570|Coffea_canephora|C2H2|Cc10_g10570
MYRDSSGPYRNLYTSFSIMAKSRNTRKQTKENKKEINQKRSPEQKEKPHSWAVVRSLFTCKHLQAQMQQQQLQKAEQQQQKKNSEEKKQQKEEQGKQEKQVPDMEESHKKCKKIKCSGSLCSNTKVMHRPEPVSPEDLKKRASSSMGGSFNTENVSCRSIKVTLNDLNGAVVSASSSSSSMFAASTTNSPLITGSFRGMPFRKFSSCYECRMVVDPVLGMTRDPSLRSTICSCPECGEIFMKAENLELHQAVRHAVSELGPEDTSKNIVEIIFQSSWLKKQTPVCKIDRILKVHNTSKTVSRFEEYRDSIKDKATKHTKKHPRCIADGNELLRFHCTTFMCSLGLNGSSNLCNSIPNCNVCSIIKNGFKVTGEFSLAGEVTGKAILTTATSGKAHDNARVVLEDDKRAMLVCRVIAGRVKRNLEGSLEEYDSVAGAAGVYSNLDELYVFNPKAILPCFVEATRIHPTDGELVTSNTSSGDVVARRPRGRPPSSKNKPKLPVIITQESTNTLRAHILEVSSGCDVFELVATYVRKRQRGICILSSSGTVNNVSLRQPAAAGSIMTLHGWFEILSLSGSFLPPSAPPGATNLTIYLAGGYGQVVGGNVVGALITFGPVIVIAASFSNVAYERLSLDEDDHSLQAVAVVVLLLVAQIINFLIHL*