Information report for Carubv10000051m
Gene Details
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Functional Annotation
- Refseq: XP_006286906.1 — probable lysine-specific demethylase ELF6
- Swissprot: Q6BDA0 — ELF6_ARATH; Probable lysine-specific demethylase ELF6
- TrEMBL: R0GSE7 — R0GSE7_9BRAS; Uncharacterized protein
- STRING: XP_006286906.1 — (Capsella rubella)
- GO:0009741 — Biological Process — response to brassinosteroid
- GO:0009826 — Biological Process — unidimensional cell growth
- GO:0033169 — Biological Process — histone H3-K9 demethylation
- GO:0048577 — Biological Process — negative regulation of short-day photoperiodism, flowering
- GO:0048579 — Biological Process — negative regulation of long-day photoperiodism, flowering
- GO:0005634 — Cellular Component — nucleus
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Carubv10000051m|Capsella_rubella|C2H2|Carubv10000051m
ATGGGTAGTGTTGAGATTCCCAATTGGCTAAAAGCCTTGCCTTTAGCACCTGTGTTTAGACCTACAGACACTGAATTTGCAGATCCTATTGCGTATATATCCAAAATCGAGAAGGAAGCTAGTGCCTTTGGGATTTGCAAGATCATTCCTCCTTTACCCAAGCCATCCAAAAAGTATGTTTTCCATAACTTGAACAAGTCTCTATTGAAGTGTCCAGAGTTGGTTTCGGATGTTGACATTTCGAGAGAGGATAGAGCTGTATTCACCACTAGGCAGCAAGAGTTAGGCCAGACTGTGAAAAAAAACAAAGGAGAGAAGAGTAAGAGTATTTCTCAAAGGACTGGTGTTAAGCAGGTATGGCAAAGTGGAGGCGTCTATACATTGGAGCAGTTTGAAGCTAAGTCGAAAACTTTCTACAAAAGCCAGTTAGGAACGGTTAAAGAAGTGTCACCTGTTGTGGTTGAGGCATTGTTCTGGAAAGCGGCTTCACAGAAGCCTATATATATAGAGTATGCTAATGATGTCCCTGGCTCTGCTTTCGGTGAGCCAGAGGGTCATTTCAGGCATTTCCGGCAGAGGAAGCGGAGGGGCAGGGGATTTTATCAGAGGAAGACAGAAATCAATGATCCATCAGATAAGATCGGTGAAAACTCATCGCCTGAGGTAGAAAAAGCACCCCTTGCTTCGACGAGTTTATCACCTCAGGATTCTTCCAAGCAGAAGAACATGGATATTGTTGATGAAATGGAAGGTACTGCAGGCTGGAAGCTCTCCAACAGTTCCTGGAACCTTCAGACGATTGCACGTTCACCTGGTTCTGTTACACGTTTCATGCCGGATGACATCCCTGGTGTTACATCTCCCATGGTTTATATCGGTATGTTGTTCAGCTGGTTTGCCTGGCACGTTGAGGATCATGAGCTTCACAGTATGAATTATCTTCACACTGGCTCACCCAAGACTTGGTACGCTGTCCCTTGTGATTATGCGCTTGAATTTGAAGAGGTTATTCGCAAAAATTCTTATGGCAAGAACATTGACCAACTGGCTGCTCTCACCCAACTAGGCGAAAAGACAACTCTTGTATCACCTGAGGTGATAGTTGCATCTCGCATTCCCTGCTGTAGGTTGGTACAAAATCATGGTGAATTTGTTGTGACGTTTCCGAGGTCTTATCATGTAGGATTCAGCCACGGTTTTAACTGTGGGGAAGCTGCTAATTTTGGAACTCCACAGTGGCTTAACGTAGCTAAGGAAGCTGCTGTGCGTCGGGCAGCCATGAATTATCTTCCCATGCTGTCCCATCAGCAGCTGCTGTATCTCTTGACCATGTCTTTTGTTTCGAGAGTGCCTCGATCATTCCTACCAGGTGGTCGTAGCTCCCGACTGAGAGATCGACAGAGAGAGGAAAGAGAGTTCCTTGTGAAAAAAGCTTTTGTTGAAGATATATTGAACGAAAATAAGAATTTATCTGTTCTTCTTCGAGAACCAGGCTCTCGTTTGGTGATGTGGGACCCTGATTTACTTCCGCGCCATAGCGCACTGGCTCTTGCAGCTGTTGGGGGTGCTGCTACTTCTGCTGTTTTACCTCCATCAGTGGCAAAAAATATACCTGAGGAGGGTCATTCTGAATTGCAGAATAAAGAGAAGACTACTCTTTTAGAGGAATTGAGTTTGTTTATGGAGAAGTTGAATGATGTATACTATGATGATGATGATGGCCTGCTTAACGATTTCCAAGTTGATTCTGGAACCTTGCCATGTGTGGCATGTGGCGTTCTTGGCTTCCCTTTTATGTCTGTGGTACAGCCTTCTGAAAAAGCATTAAAAGATCTCTTAGAGGGACAAGGAAAGATAGATGCTCAGGAAATTATGACACTGTCATCAGAAAAGTCTCACTGCGAATGGAAAACATCATCTAGATATATAAGGCCTCGCATTTTCTGCCTTGAACACACTATTGAACTTCAGAGGCTTCTGCAATCAAAAGATGGAATGAAGTTCCTTATAATTTGCCATAAAGACTTTCAAAAATTTAAGGCACATGCGGCTACTGTGGCAGAGGAGGTCAAAGTCCCTTTCAGCTATGATGATGTCCTGTTAGAGGGTGCATCTCAAGAAGAGTTGAGTCTAATTGACCTTGCAATTGAAGATGAAGAAAACTACAAACACGCCATAGACTGGACCTCAGAACTTGGCATCAACTTACGGTACTGTGTTAAAGTGAGGAAAAATTCCTCTACTAAGAAAATTCAGCACGCACTGTCACTAGGTGGCTTGTTCTCTGATAGAAGCCACATGCTAGATTTTTCAACTATCAGATGGCTGCAGAGAAAATCACGCTCAAAAGCTAAACCCAGTTCTACCTCAAGTTTCACACATCGTGAACAGCTCGAAGTAAAAGTAGATGGAAAATTAGGGGAGAATTTGGATTCTCAAACCGAAAAAAAGGAAAAAAAGATCATCCAGTACTCGAGAAAGAAAAAGTTGAATTCCAAGCCATCTGTAGAACAAGGTCAGGAGCTAGCTCCCTTGGCTGAATCAAGAGAATTTGGTAAGACATGCAATAAATTGGCCAATATGTCACATCTGGATAGTTCAATTCGTTTTGATGGGGCACATGATCAAGAACATCCCGAGATCACTATCAAGTTTGGTTCAGCTTTAGATGGGAATGTCACAAATAGTGTTAGTATGGTGAATGGATACTCTGCGGACCTATCTTCCGTATCTAGAGAGCAGCAGGGACACTCTATGACCAGCAATAATAATGGGTCCAACGCAGGTAGTCATGTTGTGGCAAGTCAGACCGTACTTATTTCTACAGGTGATAATCATGTTAGACCAAGAAAATTTTCTGGTGATTATGTCTGCAGTGATGTGTCTGTACGTGATCTTCAGGAAGTGGTTGAAATGAGTGACCAAGAGTTTGGAGGACCTAGGTCTACTGTCACTAATATCGAGGATGAACAGCAATCACAGATGGTGCAACCAACCAAAAGAGAAGCTGTATCTGGTGATCACGGACAGATGGAGGGAGCAGAAGCTGTGTGTACCAGAGAAATCTTGTGCTCTGATATTATACTGCAGACTGAGCATTCTTCAGCACAAGTGGGTATGGAAATTCCTGAAATAAACACGGCCAGTGAGAACATGGTTGTCGACATGACACATGATGGTGAACCTTTGGAAAGTAGTGATATATTAAGTTCGAGCAACGGTGATCAAGCTTCTTCAAATGGATTGCAAGTTCCAGATGATGAGCTTAGCATGGAGAGTGAAGTTTCAAGCTCAGAAAACACCGAGGTTATCGAGGCTCCCAATTCAACGGGAGAAGCAAAGAAGAAGATGAAGATAGATTCAGAGTTTGAGACAAATGATAATCTAGAGAGTAGCATTGGTTTCATAAGGAGTCCTTGTGAAGGGTTGAGGTCAAGGGGCAAGAGGAAATCGAGATCTGAAACTTGGCTGAAGCTCACTGAAACGAGTGGTGAAGCGAAGAGACCCATTGCAAAAAGGGGTAAGAAAACTCCCAAGGCTCGCTCAGGTAGTCTTCAACAAGAAGATCCCACAACAACTCACCCCAACCGTTGTTACCTAGAGGGATGTAAGATGACTTTCGATAGTAAAGCGAAATTACAGACTCACAAGAGAAACTGTTGCACGCACGAAGGGTGTGGAAAGAAATTCAGGGCCCACAAATATCTGGTACTTCATCAACGTGTTCATAACGATGATAGACCCTTTGAATGCTCTTGGGAAGGATGTTCCATGACTTTCAAATGGCAATGGGCGAGAACTGAGCATTTGCGTCTGCACACGGGAGAACGACCATACAAATGCAAGGTAGAGGGATGCGAGTTGTCGTTCAGGTTTGTGTCGGATTATAGTCGCCACAGACGGAAAACCGGGCATTATGTCGCATAG
Protein Sequence:
- >Carubv10000051m|Capsella_rubella|C2H2|Carubv10000051m
MGSVEIPNWLKALPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKKYVFHNLNKSLLKCPELVSDVDISREDRAVFTTRQQELGQTVKKNKGEKSKSISQRTGVKQVWQSGGVYTLEQFEAKSKTFYKSQLGTVKEVSPVVVEALFWKAASQKPIYIEYANDVPGSAFGEPEGHFRHFRQRKRRGRGFYQRKTEINDPSDKIGENSSPEVEKAPLASTSLSPQDSSKQKNMDIVDEMEGTAGWKLSNSSWNLQTIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSPKTWYAVPCDYALEFEEVIRKNSYGKNIDQLAALTQLGEKTTLVSPEVIVASRIPCCRLVQNHGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSFLPGGRSSRLRDRQREEREFLVKKAFVEDILNENKNLSVLLREPGSRLVMWDPDLLPRHSALALAAVGGAATSAVLPPSVAKNIPEEGHSELQNKEKTTLLEELSLFMEKLNDVYYDDDDGLLNDFQVDSGTLPCVACGVLGFPFMSVVQPSEKALKDLLEGQGKIDAQEIMTLSSEKSHCEWKTSSRYIRPRIFCLEHTIELQRLLQSKDGMKFLIICHKDFQKFKAHAATVAEEVKVPFSYDDVLLEGASQEELSLIDLAIEDEENYKHAIDWTSELGINLRYCVKVRKNSSTKKIQHALSLGGLFSDRSHMLDFSTIRWLQRKSRSKAKPSSTSSFTHREQLEVKVDGKLGENLDSQTEKKEKKIIQYSRKKKLNSKPSVEQGQELAPLAESREFGKTCNKLANMSHLDSSIRFDGAHDQEHPEITIKFGSALDGNVTNSVSMVNGYSADLSSVSREQQGHSMTSNNNGSNAGSHVVASQTVLISTGDNHVRPRKFSGDYVCSDVSVRDLQEVVEMSDQEFGGPRSTVTNIEDEQQSQMVQPTKREAVSGDHGQMEGAEAVCTREILCSDIILQTEHSSAQVGMEIPEINTASENMVVDMTHDGEPLESSDILSSSNGDQASSNGLQVPDDELSMESEVSSSENTEVIEAPNSTGEAKKKMKIDSEFETNDNLESSIGFIRSPCEGLRSRGKRKSRSETWLKLTETSGEAKRPIAKRGKKTPKARSGSLQQEDPTTTHPNRCYLEGCKMTFDSKAKLQTHKRNCCTHEGCGKKFRAHKYLVLHQRVHNDDRPFECSWEGCSMTFKWQWARTEHLRLHTGERPYKCKVEGCELSFRFVSDYSRHRRKTGHYVA*