Gene Details:

  • Gene ID: CA05g17800
  • Gene Family: C2H2 family
  • Description: C2H2 family protein
  • Species: Capsicum annuum
  • Source: C2H2 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_016554132.1  — PREDICTED: protein SHOOT GRAVITROPISM 5-like
  • Swissprot:  Q9C9X7  — IDD14_ARATH; Protein indeterminate-domain 14
  • TrEMBL:  A0A1U8F426  — A0A1U8F426_CAPAN; protein SHOOT GRAVITROPISM 5-like
  • STRING:  Solyc05g054030.2.1  — (Solanum lycopersicum)

Gene Ontology:

  • GO:0003676  — Molecular Function — nucleic acid binding
  • GO:0046872  — Molecular Function — metal ion binding

Family Introduction:

  • Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.

Literature:

Sequences:

CDS Sequence:
  • >CA05g17800|Capsicum_annuum|C2H2|CA05g17800
    ATGTTAGCTAGCCACTCTTTCTTGTTTGGTTCTCCTTCTAATTATTCTGATCAATTTTCTTCACCAGAAAATGGTTTTATTATCAAAAGAAAAAGAAGACCGGCTGGTACTCCAGATCCTGATGCACAAGTTGTATATCTTACAGCTGAGATGTTAATGGAATCTGATCGTTACGTTTGTGAAATTTGCAATCTTAGCTTTCAAAGAGAACAAAATCTTCAGATGCACCGGCGCCGCCATAAGGTTCCATGGAAGTTGAAGAAGAAGATGGATCAAGTGATTAAGAAGAGAGTATATGTGTGTCCAGAGCCAAGTTGTGTGCACCATGATCCTTGCCATGCACTAGGTGATCTTGTGGGAATCAAAAAACATTTTAGAAGAAAACATAGCAATTACAAACAATGGATTTGTCAAAAATGCAACAAAGGTTATGCTGTTCAATCAGATTATAAAGCTCACATCAAAACTTGTGGGACTAGAGGACATTCTTGTGATTGTGGAAGAGTTTTCTCTAGAGTTGAAACATTTATTGAACATCAAGATTCATGCAAACCACAAAGTAGTACTACTACTACAACCACTAAAGAATGTCATGATGTACAAACAACAAATCCAATTTTCTTGCCTACAACAACTACTACTACTCATCATCCACATGACCAATATTCAAGAATATTGCCTAATCTTGATCTTGAACTTTTCACTTCTCCAAATTACAACAACCAAGACACAAACTATTATTCTCCCTTTGAACAACAAAATGAACATACCCCACAATCAAATATGTCATCATTTGTTGGTCAAAGTCATGACAATTACATAGTCCAAAACAATGAAGCCAAAAACATCATTGAAGAAGCAACAACACAAGTGTCAAGATTGAAAAGTGAAGCAAATGAAATACTCAAAATAGTAATGGAAGAAAAAGCAATGGCTGAAGAAAAAAGACAAGAAGCAAAATGTTTGATTGAATTAGCCAATCTTGAAATGGCAAAGGCAAGAGAAATTACACAAAGTATTATTGGCTCATCATCATCATCACATGTCATGAAGATAATAAAATGTAGCTCTTGTACTAATTTAAGTAATTATTTGTCATCTTCAATTTATAGAAGATGA
Protein Sequence:
  • >CA05g17800|Capsicum_annuum|C2H2|CA05g17800
    MLASHSFLFGSPSNYSDQFSSPENGFIIKRKRRPAGTPDPDAQVVYLTAEMLMESDRYVCEICNLSFQREQNLQMHRRRHKVPWKLKKKMDQVIKKRVYVCPEPSCVHHDPCHALGDLVGIKKHFRRKHSNYKQWICQKCNKGYAVQSDYKAHIKTCGTRGHSCDCGRVFSRVETFIEHQDSCKPQSSTTTTTTKECHDVQTTNPIFLPTTTTTTHHPHDQYSRILPNLDLELFTSPNYNNQDTNYYSPFEQQNEHTPQSNMSSFVGQSHDNYIVQNNEAKNIIEEATTQVSRLKSEANEILKIVMEEKAMAEEKRQEAKCLIELANLEMAKAREITQSIIGSSSSSHVMKIIKCSSCTNLSNYLSSSIYRR*