Gene Details:

  • Gene ID: CA04g11250
  • Gene Family: C2H2 family
  • Description: C2H2 family protein
  • Species: Capsicum annuum
  • Source: C2H2 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_016569747.1  — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform X1
  • Refseq:  XP_016569748.1  — PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform X1
  • Swissprot:  Q9C8N5  — STOP1_ARATH; Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
  • TrEMBL:  A0A1U8GEJ9  — A0A1U8GEJ9_CAPAN; protein SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform X1
  • STRING:  PGSC0003DMT400023881  — (Solanum tuberosum)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0010044  — Biological Process — response to aluminum ion
  • GO:0010447  — Biological Process — response to acidic pH
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003676  — Molecular Function — nucleic acid binding
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0046872  — Molecular Function — metal ion binding

Family Introduction:

  • Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.

Literature:

Sequences:

CDS Sequence:
  • >CA04g11250|Capsicum_annuum|C2H2|CA04g11250
    ATGGATCCTGACGACAGTCTAACTGAAGACCCTTGGATAAAATCTTCTTCATCTGGCAATGAATTGCTGAAAATTATGCCCTCAGATAATCATTCATTTACCAATTTCAATCTTCATGCGCAGAAGTGGGAAGGTTCCTCTTATTTGGATCAGCAGATCAGGATTGAGCAACAGTTTTCTGGATTTACTAAACCGAAGCACACATCTGAGATGGATCAACAGGGGAATCACAGGAATGAAAATCATGACTCGACCAGAATACGTGACTGGGATCCAAGAACTTTGCTGAACAACCTTTCGTTTCTCGAACAAAAGATTCATCAGCTCCAGGAGTTGGTGCATCTGATTGTTGGCCGGAGAGGTCAAGATGGGGTTCAGGGAAATGACCTTATAGTTCAGCAACAACAGTTAATCACAGCTGATCTTACTTCTATTATAGTCCAATTGATATCAACTGCAGGAAGTCTTCTTCCAACTATGAAGCACACACTTTCATCTGCAAGCCCTGCTGCTAACCAACTTGGTCAGGTTGGTGGTGTCACAATTCCTTCTACAATAGGTACTAGTGCTAGTGCTGGTGGGCTGACATGTAATGACGGTGTTGCGAAGGTGGAAGATCAATCCAACCACGTTGACCAGTTGAGAGATTGTGGGATTGAACAAAATCATCCTGCCGATGAACATGAATTGAAAGATGAAGATGAAGCTGAGGAAGAAGAGAACCTTCCTCCCGGTTCCTATGAGATTCTGCAGTTAGAAAAGGAGGAAATTCTTGCACCGCACACTCACTTTTGCACAATTTGTGGCAAAGGATTTAAGAGGGATGCCAATTTGCGGATGCACATGAGAGGTCATGGTGATGAGTACAAGACTCCAGCAGCTCTTGCAAAGCCTCATAAAGAACCCAGTTCTGAGCCGACACTCATCAAAAGGTATTCCTGTCCTTATGTTGGATGCAAGCGCAATAAGGAGCATAAAAAGTTTCAACCTCTGAAGACCATCTTATGTGTGAAAAACCATTACAAGAGAACCCACTGTGAGAAAGCCTATACTTGCAGTAGATGTAATATTAAGAAATTTTCAGTAATTGCTGATCTTAAAACACATGAAAAGCATTGTGGAAAGGATAAGTGGCTTTGTTCCTGTGGCACAACATTTTCTAGGAAAGACAAGCTTTTTGGACATATTTCCCTTTTCCAAGGTCATACTCCTGCAGTTTCTCCAGATGAAACTAAAGGATCTGCTGGGATGTCTGACCGGGGTCAAACCAGTGAAGTCACCATGAAAGCTCGACAAGAAAACTTTAAGGTAAATGCTTCACATGGCAATGAGTTTCAAAATCCCGGGGTTGTAAAAGAGGGCGCATATGGCTCACCAAGCAGTTATTTCTCACCTTTGAACTTTGATACTAGCAATCTTAATGGATTTCAAGAGTTCCCTCGACCACCATTTGACGAGTCAGATAGCTCATTGTCATTTCTGCTATCTGGATCATGTGAATACCCTCCTCACAAGGCTGCAAAATATATGAGTTCTACTGAAATGGAATAA
Protein Sequence:
  • >CA04g11250|Capsicum_annuum|C2H2|CA04g11250
    MDPDDSLTEDPWIKSSSSGNELLKIMPSDNHSFTNFNLHAQKWEGSSYLDQQIRIEQQFSGFTKPKHTSEMDQQGNHRNENHDSTRIRDWDPRTLLNNLSFLEQKIHQLQELVHLIVGRRGQDGVQGNDLIVQQQQLITADLTSIIVQLISTAGSLLPTMKHTLSSASPAANQLGQVGGVTIPSTIGTSASAGGLTCNDGVAKVEDQSNHVDQLRDCGIEQNHPADEHELKDEDEAEEEENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKEPSSEPTLIKRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRTHCEKAYTCSRCNIKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHISLFQGHTPAVSPDETKGSAGMSDRGQTSEVTMKARQENFKVNASHGNEFQNPGVVKEGAYGSPSSYFSPLNFDTSNLNGFQEFPRPPFDESDSSLSFLLSGSCEYPPHKAAKYMSSTEME*