Information report for CA03g36390
Gene Details
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Functional Annotation
- Refseq: XP_016562559.1 — PREDICTED: protein indeterminate-domain 7-like
- Refseq: XP_016562560.1 — PREDICTED: protein indeterminate-domain 7-like
- Swissprot: Q8H1F5 — IDD7_ARATH; Protein indeterminate-domain 7
- TrEMBL: A0A1U8FUP5 — A0A1U8FUP5_CAPAN; protein indeterminate-domain 7-like
- TrEMBL: A0A1U8G3J9 — A0A1U8G3J9_CAPAN; Protein indeterminate-domain 7
- STRING: Solyc03g121660.2.1 — (Solanum lycopersicum)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Manihot esculenta: Manes.11G025600.1.p
- Nicotiana benthamiana: Niben101Scf02078g08043.1, Niben101Scf02831g07012.1, Niben101Scf38401g00004.1
- Nicotiana tabacum: XP_016479410.1, XP_016479409.1, XP_016433590.1, XP_016433584.1, XP_016500153.1
- Petunia inflata: Peinf101Scf06241g00003.1
- Populus trichocarpa: Potri.003G040100.1
- Solanum lycopersicum: Solyc03g121660.2.1
- Solanum melongena: Sme2.5_00007.1_g00011.1
- Solanum tuberosum: PGSC0003DMP400004413, PGSC0003DMP400004412, PGSC0003DMP400004411
Sequences
CDS Sequence:
- >CA03g36390|Capsicum_annuum|C2H2|CA03g36390
ATGATGAAAGGTTTAATGAATCAACAAGTACCTGGTGTTGTGGAGGAGAACATGTCCAATTTAACATCTGCATCTGGTGAAGCTAGTGTATCTTCTTCCAATCGAAATGATAACAATAATACTACTGGAGGAATCTATCCTCCTCAGTATACTTTTGCTCCTCCAATTCAACAAGCCCAACCTGCACAGCAACAAATCAAGAAGAAAAGAAATCAACCAGGAAATCCAGACCCAGATGCTGAAGTGATAGCTTTGTCACCAAAGACACTAATGGCAACAAACAGATTTGTTTGTGAAATCTGTAACAAAGGATTTCAAAGGGATCAGAATCTGCAGCTACACAGAAGAGGACACAACTTGCCATGGAAGCTCAAGCAGAGAACAAGCAAAGAAATTAGAAAAAAGGTTTACGTTTGCCCCGAAACCAGCTGTGTTCACCATGACCCAGCAAGAGCACTTGGTGACCTTACGGGAATCAAAAAGCATTTTTGTAGAAAACATGGTGAGAAGAAGTGGAAATGCGAGAAGTGTTCAAAGCGTTACGCTGTTCAATCGGATTGGAAAGCTCACTCGAAAACTTGTGGAACTAAAGAGTATAGATGTGACTGTGGAACACTTTTCTCAAGGAGGGATAGTTTCATAACTCACAGAGCATTTTGCGATGCATTAGCGGAAGAGAGTGCAAGAGCGATAACAGGAAATCCAATTCTACCGACTCCTTCGACATCTCATATGAATTTTCAGTTTCAACCATTTAACGCTGAAATTCCAGTTACATTTTCCTTGAAGAAAGAGCAACAAACCGGGTTCAATTTGAGGCCTGAAATTCCATCATGGCTATTGGTTGGAGGTGGTGGTGGTCCTGGACCTGGTCCAGGTCCTCCTCCGCCATCACCTATTGAGCTAAGCTCATCGATCTTCCAATCCTCTAGGTTCGGTGATCAGGACTACGCGCAGAATCACCAACAACAAGGATTCATGAACCCTAACCCTAGTCTATCCGGACCTACATCCGGAGCAATGGCTTCTTCCTCTCCACATATCTCTGCAACTGCGTTGTTGCAGAAAGCAGCTCAGATGGGTGCTACCATGAGCAACAAAGCTAGTACTGTTTCTGCAGCAGCAGCATTAGGTCCAGCCATGCTGGTCAGACCCCACCAAATTCACGTGTCTTCTTCTGCTACTGCTACTGAGTCTGTTAACAACGCAACAGATTTTGGACTCAATTTGTCTTCACGTGAAGACCTTACATCTGGGTTTTTCAATAGCTTGGCTTCTTATGGAAATAAAGCTGCTACTGCTACTGCTTCTGCCGTAGTTGCTCACGCCACAATGCCTGTATCAACTCCAACTCCGTCTTCTCTTAACGATATGATGAATTCGTTCTCTTCCACTACTCCTACCGGATTTGAAGGATCAAACTTCGATGATCCATTCAGCAGCATTGGCATTTTGAATCCAAAAAACGGCAATGGTGATGGTAACGATGATATGACGAAAGATTTCTTAGGCCTAAGACCTCTTTCACATAGCGACATTTTCAACATAGCTGGTCTAGTTAATACTTCCAATGAAAATCAATCGCAAAATCACAAAACATGGCAAAGTTAA
Protein Sequence:
- >CA03g36390|Capsicum_annuum|C2H2|CA03g36390
MMKGLMNQQVPGVVEENMSNLTSASGEASVSSSNRNDNNNTTGGIYPPQYTFAPPIQQAQPAQQQIKKKRNQPGNPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPETSCVHHDPARALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAEESARAITGNPILPTPSTSHMNFQFQPFNAEIPVTFSLKKEQQTGFNLRPEIPSWLLVGGGGGPGPGPGPPPPSPIELSSSIFQSSRFGDQDYAQNHQQQGFMNPNPSLSGPTSGAMASSSPHISATALLQKAAQMGATMSNKASTVSAAAALGPAMLVRPHQIHVSSSATATESVNNATDFGLNLSSREDLTSGFFNSLASYGNKAATATASAVVAHATMPVSTPTPSSLNDMMNSFSSTTPTGFEGSNFDDPFSSIGILNPKNGNGDGNDDMTKDFLGLRPLSHSDIFNIAGLVNTSNENQSQNHKTWQS*