Information report for C.cajan_24710
Gene Details
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Functional Annotation
- Refseq: XP_025674326.1 — probable lysine-specific demethylase ELF6
- Swissprot: Q6BDA0 — ELF6_ARATH; Probable lysine-specific demethylase ELF6
- TrEMBL: A0A151SE22 — A0A151SE22_CAJCA; Lysine-specific demethylase lid
- STRING: XP_004496256.1 — (Cicer arietinum)
- GO:0009741 — Biological Process — response to brassinosteroid
- GO:0009826 — Biological Process — unidimensional cell growth
- GO:0032259 — Biological Process — methylation
- GO:0033169 — Biological Process — histone H3-K9 demethylation
- GO:0048577 — Biological Process — negative regulation of short-day photoperiodism, flowering
- GO:0048579 — Biological Process — negative regulation of long-day photoperiodism, flowering
- GO:0005634 — Cellular Component — nucleus
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0008168 — Molecular Function — methyltransferase activity
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004496256.1
- Citrullus lanatus: Cla97C08G150370
- Cucumis melo: MELO3C019813P1, MELO3C019813
- Cucumis sativus: Cucsa.137560.1
- Glycine max: Glyma.10G209600.2.p, Glyma.10G209600.1.p, Glyma.10G209600, Glyma.20G181000.1.p, Glyma.20G181000
- Lotus japonicus: Lj0g3v0106299.1
- Medicago truncatula: Medtr1g094740.1, Medtr1g094740
- Ricinus communis: 28507.m000165
Sequences
CDS Sequence:
- >C.cajan_24710|Cajanus_cajan|C2H2|C.cajan_24710
ATGGGTGGTGTTGAAATCCCCAATTGGCTGAAAGGGTTGCCACTGGCGCCAGTATTTCGCCCTACAGACACTGAATTTGCTGACCCAATTGCTTATATTTCAAAGATTGAGAAGGAAGCTGCCAACTTTGGGATTTGTAAGATAATTCCACCGTTGCCCAAACCTTCAAAAAGATATGTATTTTCTAATTTGAATAGGTCACTCTTGAAGTGCCCTGATTTGGGTCCTGATAGCAGTTCATTAGGTGTTTGTAATTCTTCAAAAACCAGTTCTGGGGATAGTAGTAGTTTTGGGGTGTCGCGAGCCGTGTTTACCACAAGGCACCAAGAACTAGGGCAGAGTCAGAGTGTGAAAAAATCCAAAGGGGCAGTTCAGAATCCACTGTCAGGTGTTCATAAGCAAGTATGGCAAAGTGGGGAAGCTTATACTCTGGAACAGTTTGAGTCTAAATCGAAGTCTTTTGCGAGAAGTGTGCTCGGTCCGGTGAAGGATGTTTCTCCATTGGTTATAGAGTCTCTGTTTTGGAAGGCATCTTTAGATAAGCCTATATATGTGGAGTATGCCAATGACGTGCCCGGTTCAGCTTTTGAAGAGTCCAAGGATTCACATTCGCAACCTTCTAAGGAAAAGGGTTCAGATGCCAGCAATGATATGCAAGGCACTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAACTTGCAAGTTATTGCACGCTCATCTGGCTCACTCACACGATTTATGCCGGATGATATTCCTGGTGTCACTTCACCTATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAGCTTCACAGCATGAATTTTCTTCATACTGGCTCATCAAAGACTTGGTATGCTGTTCCAGGAGATTATGCCTTTGCCTTTGAGGAAGTCATCCGGACCAAGGGTTATGGTGGTAATGTTGATCACTTAGCTGCTTTGAAACTTTTGGGTGAGAAAACAACCCTTTTATCACCTGAGGTAATTGTTGCATCTGGGATTCCTTGTTGCAGGTTAACACAGAACCCTGGTGAATTTGTTGTGACTTTTCCAAGAGCTTATCATGTAGGATTCAGCCATGGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCCCAATGGCTTAGAGTAGCTAAGGAAGCTGCAGTGCGCCGAGCTGCAATGAACTATCTTCCCATGCTTTCCCATCAGCAACTGCTTTACTTACTGACCATGTCTTTTATTTCAAGAGTGCCAAGAACACTATTACCTGGTGTGCGTAGTTCTCGTCTGAGAGACCGTCAGAAAGAAGAGAGGGAGATTTTAGTTAAACAGGCTTTTATAGAAGACATGCTACTGGAAAACAAGCTACTATCCATTCTTCTTGGAAAGGAAGCAACTAAAAAAGCTGTTTTATGGAATGCTGATTTACTGCCAGATTCCAGCAAAGATTTTCAGTTGCCGGATTTAACTTCTACTACTGGAACATCTGTGTCAGACATGTCAAATATTAGTTCTGCAGAAAAGAGTAGTCATTATCTTCTTGATGAGATGAGTTTGTATATGGATAATTTAACCTATTTAGATCTTGGTGATGATGATCTTCCATGTCACTTCCAAACTGATTCAGGAGCACTTGCTTGTGTGGGTTGTGGAATCCTTGGTTTTCCATTTATGACTGTGATACAACCAACTGAGAAATTGACAATGGAACTTCTTCCAGATAATCATCTAGTTCATGTTTCCTCTCCAGACTCTACAGCTTGCATTCGGGATCTTTCTATTTCTGAACTTTCATCAGTAAAGGTGTTGCCAGATCAATCTTTAAACATGTGCAGTAAATATTGGAACACCTCCAACTTTCAGAAGATAAAGGCACATGCCAGTGCAGTCGCGGATGAGATACATAGTGCTTTTGATTATAATGAGGTTCCATTAGAAACAGCATCCTCAGAATATTTGACTCTGATAGATCGGGCAATTGATGGTGAAGAACTTGATGAATGCGAAGATTGGACATCTAAACTAGGCATTAACCTACAGTCTTGTGTCCATGCAAGAAATAACCCTCTATCTAAACAAGTTCCTTGGACACTAGGGACGCTGTTCTACGGTAAACCTCCTGCTTCAAAAATTTTAGCTTTAAATTGGCAGTCGCAAAGATCTCGGTCTAAAAAGTCAAGTCGTTTAGCTCAGACTAAACCCTGTGACAGCATTCAGAGAAAGAATGGTGATCGGTTGGATGGAAGAATAGATGACTCCACTTCTGAAAAGAAGTTAATTCAATATTCAAGGAGGAAGTTCAAGTCAAAGCAAAGGTGTTTCCCTGTAGTAAGCATGGCCTGTGATTTCCAAGAGAAGTCCAAAATTGTGTCGGCTATCTCAAGTGGGGATCATTATAATTGTGTTTCTAAAAATGGGCTTGAAGCTGAGAATTTCAGGAGTGATTGTACATTGTCATTCAGTCATTCTAAGATGCATTGCAATACCAGTGTCTCAGAAATACGTCGCAAGGAGAGCCAAGATTGTCAGGACAAGAAATATTCTAGTTCACTTACAAATGCAACAGATAGAAATATTGAAATGATTAGAAAGACTGAAAATACAGAAGCAGTTATCACTCGTAGCGAGTGTAATAGCTTAAGTCTGTATGATGAAGTGCATCAAGAATATCAGTCTACTTGCAAAAGCAACAATGACGAAGCTGCTTTATCACCTGCTTCATTGGTAAATCATTCTACTCTTGCCTCTAGGGATGGAAGTTTTGAAAATAAAGAAAAAGAAATGAAAATCCAGTCAATTAATAGAATTGATGAAGAACATTGCTCTGGCACTGATGCATTGCTAAAGGACTCTTCTCTATCAATTGAGGAATGTTCTGAAACTGAGAAAGAGACGTGTGTTAGAGAAAACGTGAATGGAATCAAAGCTGATTTGTCACAAAATAATAGGGGGCAGGAAAGCTGTGAGTTGACTACAGCAGTTCCCAGATCAAATGCTCGGAAGAAAAGGAAGAGGGAAGTAGAACATACAGCAAAAGGCCAATCCAATTGTGACAACTTTATTAGAAGTCCATGTGAAGGGCTGAGGCCAAGAGCTGGGAAGAATGCTGGTGGCAAAAGTGGGGTGGAAATCAACCAAATTGACAAGGAAAATCAGTTGGCTAAAAGAGCACGGAGATCTTCTGAAGTTTTGGTTCCTCGCAAAAATAAAAAAGATGATGTTAAAAGGCCCCACAAGTGTGACCTTGATGGTTGCCGAATGAGTTTCAAGACTAAGGCCGAGTTACTGTTGCATAAACGAAACCTCTGCCCACATGAAGGGTGCGGTAAGAAGTTCAGCTCCCACAAATATGCTTTACTTCACCAGCGTGTTCATGATGATGAGAGGCCCCTTAAGTGCCCATGGAAAGGTTGTTCCATGACATTCAAGTGGGCATGGGCAAGGACAGAGCATATACGTGTACATACCGGGGAGAAGCCTTATCAATGCAAGGTTGAGGGATGCGGCCTTTCTTTCAGGTTTGTATCAGATTTTAGCAGGCACAGACGGAAAACGGGGCATAATGTGAAAGCTCCTGCTTGA
Protein Sequence:
- >C.cajan_24710|Cajanus_cajan|C2H2|C.cajan_24710
MGGVEIPNWLKGLPLAPVFRPTDTEFADPIAYISKIEKEAANFGICKIIPPLPKPSKRYVFSNLNRSLLKCPDLGPDSSSLGVCNSSKTSSGDSSSFGVSRAVFTTRHQELGQSQSVKKSKGAVQNPLSGVHKQVWQSGEAYTLEQFESKSKSFARSVLGPVKDVSPLVIESLFWKASLDKPIYVEYANDVPGSAFEESKDSHSQPSKEKGSDASNDMQGTAGWKLSNSPWNLQVIARSSGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHTGSSKTWYAVPGDYAFAFEEVIRTKGYGGNVDHLAALKLLGEKTTLLSPEVIVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLRVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRTLLPGVRSSRLRDRQKEEREILVKQAFIEDMLLENKLLSILLGKEATKKAVLWNADLLPDSSKDFQLPDLTSTTGTSVSDMSNISSAEKSSHYLLDEMSLYMDNLTYLDLGDDDLPCHFQTDSGALACVGCGILGFPFMTVIQPTEKLTMELLPDNHLVHVSSPDSTACIRDLSISELSSVKVLPDQSLNMCSKYWNTSNFQKIKAHASAVADEIHSAFDYNEVPLETASSEYLTLIDRAIDGEELDECEDWTSKLGINLQSCVHARNNPLSKQVPWTLGTLFYGKPPASKILALNWQSQRSRSKKSSRLAQTKPCDSIQRKNGDRLDGRIDDSTSEKKLIQYSRRKFKSKQRCFPVVSMACDFQEKSKIVSAISSGDHYNCVSKNGLEAENFRSDCTLSFSHSKMHCNTSVSEIRRKESQDCQDKKYSSSLTNATDRNIEMIRKTENTEAVITRSECNSLSLYDEVHQEYQSTCKSNNDEAALSPASLVNHSTLASRDGSFENKEKEMKIQSINRIDEEHCSGTDALLKDSSLSIEECSETEKETCVRENVNGIKADLSQNNRGQESCELTTAVPRSNARKKRKREVEHTAKGQSNCDNFIRSPCEGLRPRAGKNAGGKSGVEINQIDKENQLAKRARRSSEVLVPRKNKKDDVKRPHKCDLDGCRMSFKTKAELLLHKRNLCPHEGCGKKFSSHKYALLHQRVHDDERPLKCPWKGCSMTFKWAWARTEHIRVHTGEKPYQCKVEGCGLSFRFVSDFSRHRRKTGHNVKAPA