Information report for Araip.AJC62
Gene Details
|
|
Functional Annotation
- Refseq: XP_016175354.1 — protein indeterminate-domain 4, chloroplastic
- Refseq: XP_025674517.1 — protein indeterminate-domain 4, chloroplastic
- Refseq: XP_025674518.1 — protein indeterminate-domain 4, chloroplastic
- TrEMBL: A0A444XUT8 — A0A444XUT8_ARAHY; Uncharacterized protein
- STRING: GLYMA20G24366.2 — (Glycine max)
- STRING: XP_007142834.1 — (Phaseolus vulgaris)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Araip.AJC62|Arachis_ipaensis|C2H2|Araip.AJC62
ATGGCGCAATCATCTTCATCAGCATCGCTGTTTGGATTTAGAGGAGAAGATCAGAACCAGATGAAGGAACAGCATTCCTTGCCTCCATCATCTTCAACCACCTCATCTGCACCACCACAGCAGAAGAAAAAACGAAATCAACCTGGAACCCCAAGCAAGTTTATATGTGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTTAAGCAGAAGACTACAAAAGAGCCTAAGAGGAAGGTTTATCTCTGCCCTGAGCCCACATGCGTCCACCATGACCCTTCTCGTGCTCTTGGTGACCTCACTGGCATCAAGAAGCACTACTCTCGCAAACATGGCGAGAAGAAGTGGAAGTGCGACAAGTGTTCCAAGAAGTACGCTGTTCAATCCGATTGGAAAGCTCATTCCAAGACCTGTGGCACTAGAGAATACAGATGTGATTGTGGAACTCTCTTCTCCAGGAGAGACAGTTTCATCACCCACAGAGCTTTCTGCGATGCATTGGCTCAAGAAAGTGCAAGGCAGCCACCGAACCTGAACAACGCCATTGGAACCCACCTTTATGGAAGCACCAACAACAACATGGCCCTTGGCTTATCTCAGGTGGGTATGGGTATGGGTGTTGGTGTTGGTGTTGGTGTTGGTGTAGGTGTGGGTGTGGGTCCACAACAGATACCCACCGCCATGCAAGAATCTAGCACTGATCTCTTGCGTCTTAGTGGTCGAACCGGTCAATTAGACCATCACATGCTTCCACCACCACCATCATCCTTTAGAACTTCACACCATCAACCATTCTTCATGAATGATCATCAAAACTTCCATGGCCACCAGGGACTCATGCAACTATCTGATCTTAACAACAATAGCAACAACAGCATGGATAATAATTCTCCATCAGGAGGAGGAGGAGGAGCTAATAATAATAGTAGTAACAACAATAATAATAATAATAACAGTAACCTCTTCAACCTTCCATTCCTTTCAAGCAACAGCACTAACAGCAGCAACAACTCTTTCTCTGATCAGCATGGTAACAACAACAACAACAATGAAGGGAACAACAGTTTCTTCACCGGTGCAGGTGGAAGTGCTATAATGCACCAAACAACCTCATCAACTGCACCATCACTCTTCAGCAATTCCCTCGAAACAAGCAACAACAACAACAACAGCGGTTCCATTTCTCACATGTCCGCAACTGCACTCCTTCAGAAAGCAGCACAAATGGGTGCAACTACAAGCAACAGCACCGCCTCACTCCTCAAGAGCTTCGGAGCCACTTCCACAACCAGCGCAGCTGCAAAACCACCTCATGATCATCATCATCACCTGAGGGCGGCAACAATGGTGAGCAGTGCTGCTGCTGCAGCAAACTATGGAAGCATATTCGGGTCAGGGAGCGAGCAGGGTAACCTCCAGGATCTGATGAACTCGTTTGCCACTGTAGCTTCCGCTGGACACTCTTCTTCCATGTTCGAAAGCGGTGGAGGTTCTTCTGTAGGGCTTATGGCTGGGTTTGATCATGCATACGATCATAGCTCAAACAGTAGGGAGCATAAGCTGCATGGAGTGAGCATTGGTGGTGGCTCCGATGGGCTCACTAGGGACTTTCTCGGTGTTGGTCAAGTAGTTAGAACCATGAGCAGTGGCGGCGGCGGTGGAGGCGGCGGTGGAGGAGGAGTTTCTCGAAGAGAACAACAGCAACAACATTGCTTCACGTTGAGCTCGATGGAAGCTGAAAGGAATAGTAATGCTGCGCCGTCAGGGCAATCTTTCGGTAGTAGTGGCGGTGGAGGAGGGAATTTTCAGTGA
Protein Sequence:
- >Araip.AJC62|Arachis_ipaensis|C2H2|Araip.AJC62
MAQSSSSASLFGFRGEDQNQMKEQHSLPPSSSTTSSAPPQQKKKRNQPGTPSKFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLNNAIGTHLYGSTNNNMALGLSQVGMGMGVGVGVGVGVGVGVGPQQIPTAMQESSTDLLRLSGRTGQLDHHMLPPPPSSFRTSHHQPFFMNDHQNFHGHQGLMQLSDLNNNSNNSMDNNSPSGGGGGANNNSSNNNNNNNNSNLFNLPFLSSNSTNSSNNSFSDQHGNNNNNNEGNNSFFTGAGGSAIMHQTTSSTAPSLFSNSLETSNNNNNSGSISHMSATALLQKAAQMGATTSNSTASLLKSFGATSTTSAAAKPPHDHHHHLRAATMVSSAAAAANYGSIFGSGSEQGNLQDLMNSFATVASAGHSSSMFESGGGSSVGLMAGFDHAYDHSSNSREHKLHGVSIGGGSDGLTRDFLGVGQVVRTMSSGGGGGGGGGGGVSRREQQQQHCFTLSSMEAERNSNAAPSGQSFGSSGGGGGNFQ