Information report for Achn351451
Gene Details
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Functional Annotation
- Refseq: XP_028086555.1 — zinc finger protein JACKDAW
- Swissprot: Q700D2 — IDD10_ARATH; Zinc finger protein JACKDAW
- TrEMBL: A0A2R6PWN5 — A0A2R6PWN5_ACTCH; Zinc finger protein like
- STRING: POPTR_0006s13130.1 — (Populus trichocarpa)
- GO:0010075 — Biological Process — regulation of meristem growth
- GO:0045604 — Biological Process — regulation of epidermal cell differentiation
- GO:0048364 — Biological Process — root development
- GO:0051302 — Biological Process — regulation of cell division
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0042803 — Molecular Function — protein homodimerization activity
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Gossypium arboreum: Cotton_A_32868_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D04G1096
- Juglans regia: WALNUT_00017188-RA, WALNUT_00017194-RA
- Lactuca sativa: Lsa018113
- Manihot esculenta: Manes.09G069600.1.p, Manes.08G005700.1.p
- Nicotiana benthamiana: Niben101Scf06397g04009.1
- Nicotiana tabacum: XP_016463819.1, XP_016463820.1
- Populus trichocarpa: Potri.006G129300.1, Potri.006G129300.2, Potri.016G088500.1
- Ricinus communis: 30078.m002347
- Vitis vinifera: GSVIVT01025658001
Sequences
CDS Sequence:
- >Achn351451|Actinidia_chinensis|C2H2|Achn351451
ATGAACATTTTATTTGCTCCTATAGGAGTCACCGTCCAAATCATGAGATGTAACAGCTTTAACCAGCGCATGAATGCACACTCTTGTATGCAAAAAAGAGAGAGAGAGAGACAGAGGGAGAGACAGAAGTGGCCCAGCTTGAATCTACGGCTGACCGACTTTGAAAATAAGGGTTTTGGTCAACAAGCAGATCCAAACCCTAACCCTAACCCTAAACCCATCACCAATACAGTGTCCAAGAAGAAGAGAAATCTACCAGGAACACCAGATCCAGATGCAGAGGTGATTGCTCTATCACCAAAATCCCTAATGGCCACGAACCGATTCATCTGCGAAATCTGCAACAAGGGCTTCCAAAGGGACCAAAACTTACAGCTTCACCGGAGAGGCCACAACCTGCCATGGAAGCTGAAGCAACGCGCAAACAAGGACCAGGTCCGAAAGAAGGTATACATATGCCCGGAAAAGGCCTGCGTCCACCACGACCCCGCCCGGGCCCTAGGTGACCTCACGGGGGTCAAGAAGCACTTCAGCCGGAAGCACGGAGAGAAGAAGTGGAAGTGCGACAAGTGCTCCAAGAAGTATGCAGTTCAATCGGACTGGAAGGCCCATTCCAAGACCTGTGGAACGAGGGAGTACAAGTGTGACTGTGGCACTCTTTTTTCAAGGAAAGATAGTTTCATCACCCACAGAGCATTCTGTGATGCCTTGGCTGAAGAAAGTGCAAGATTCACTTCTGTTGCAGCACCTACCACGACGATGAACTTCAGAAGTGAGTCTAATTTGAATGAGGGTTTCAATAACAATAACAATATTACTCAGCCGAATTTGACGGATGGAATTGTCGGAATTTCCCAATTTGGTGGAGGTTTTGGGCCAAATTACGGTGGCGTGGCTGCCGCGAATTCACTGATAAGTGAGCAGCAGAAGCCTGGATTGTCGCTGTGGTTGGATCAGGCAAATTCTCAGCTTAATGCTATAGGCTCTACAAGTTCTTTGCCTGATGAGCTGCAAATGCCACCTTCAAATCTGTTTAACTCATCAACAATGGCCAATTTCGGTACCTTAAATCAGTCCCAGTGGGTTGACAAGATTAACGTTGCAACTTCAAAATCCGCGAATCTCTACTCCGACAACCAGAACTACCATCCGAATTCGCCGGTGCCACCCATGTCTGCCACCGCGCTGCTTCAGAAGGCGGCACAAATGGGGTCCACAAGAAGTAATCCATCATTCACGGGCAACAATTTTGGACTAATGAATTCCAATATAAATAATGCTGTGTCTCACGGCAGAAACGATCAGTCACATCATTTGGTGGGCCATAAACAAGCATCGGAAATTTTAGTTGGCCCGGCCAACTTACCGGCCCGTGATTCATTAATGGGTAGTTCAAGTTTGAGCTCCGTGACTAGTGCTACATCAAGCAATATCGAGCAAATTATGATGCAAAGTGGTGTGAATTCAATTGTTCCTTTGAAGTTGCACCCGGGTTCAAACCGCATCGAAAATGGTCTGACCAGGGATTTTTTGGGCATGGGAGGTGAGGGTAGTGGTCGTGCATTCTTGCCACAAGAGCTAGCCAAGTTTGCTTCAATGGGTTCGGCCATGGGTTTGAGCCATTTCAATACTAGCAGCCACTGA
Protein Sequence:
- >Achn351451|Actinidia_chinensis|C2H2|Achn351451
MNILFAPIGVTVQIMRCNSFNQRMNAHSCMQKRERERQRERQKWPSLNLRLTDFENKGFGQQADPNPNPNPKPITNTVSKKKRNLPGTPDPDAEVIALSPKSLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRANKDQVRKKVYICPEKACVHHDPARALGDLTGVKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSFITHRAFCDALAEESARFTSVAAPTTTMNFRSESNLNEGFNNNNNITQPNLTDGIVGISQFGGGFGPNYGGVAAANSLISEQQKPGLSLWLDQANSQLNAIGSTSSLPDELQMPPSNLFNSSTMANFGTLNQSQWVDKINVATSKSANLYSDNQNYHPNSPVPPMSATALLQKAAQMGSTRSNPSFTGNNFGLMNSNINNAVSHGRNDQSHHLVGHKQASEILVGPANLPARDSLMGSSSLSSVTSATSSNIEQIMMQSGVNSIVPLKLHPGSNRIENGLTRDFLGMGGEGSGRAFLPQELAKFASMGSAMGLSHFNTSSH*