Information report for Achn265511
Gene Details
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Functional Annotation
- Refseq: XP_028111577.1 — uncharacterized protein LOC114309884
- TrEMBL: A0A2R6QYE1 — A0A2R6QYE1_ACTCH; Methyl-CpG-binding domain-containing protein
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004485592.1, XP_004485591.1
- Manihot esculenta: Manes.18G066500.1.p
- Nicotiana benthamiana: Niben101Scf00477g00010.1, Niben101Scf02537g13011.1
- Nicotiana tabacum: XP_016479571.1, XP_016460963.1
- Petunia inflata: Peinf101Scf00657g05024.1
- Populus trichocarpa: Potri.002G097700.6, Potri.002G097700.2, Potri.002G097700.5, Potri.002G097700.3, Potri.002G097700.1, Potri.002G097700.4
- Prunus persica: Prupe.8G062800.2.p, Prupe.8G062800.1.p
- Sesamum indicum: XP_011100981.1
- Vitis vinifera: GSVIVT01015726001
Sequences
CDS Sequence:
- >Achn265511|Actinidia_chinensis|C2H2|Achn265511
ATGAATCAAAAAGATACAGAACAAGAAGGCCATGATGATGTAAAATGCCCTAACGGACGGCAGTTTGTGTCATGCAAGGAAGTATCCTCATATTTACTTTCGCTTGGACTCCAAGATGTGAATCGTCGAAATTGTGGTCAAAGCAGTGAGAATACTCAGTTGACCTACAAAGTTGCTTGTGGAAATTCTGCAGATCTTGCTGTTAAAGAAATCAATGAAAGAGGAGACCTTGTTTGCTATTCATCATCGGTCATTACCTATGTCTCAAATGATCATGTGAAGCATGTCACTTCAGTGGTTGAAAATTCTGGGGAGATTCAAAGCGGAGAAATTTTGAAATGCGACAAGTGCACCATGACTTTTGACGTGAAGGATGATTTATTGCACCACCTGTTATCATCCCATAGGAGAAAGAGATCAAGATTTGGTTCATCCATCACTGATGGGGTGATAATCAAAGATGGACAATATGAGTGTCAGTTCTGCCATAAGTCATTTAATGAAAGGAATCGTTACAATGGTCACGTTGGGGCCCATAAGAGATACCACTTGAATGAAGCATCGCCAGGTGTTCTGAGCATGCAAAATAGTGTTGGCCCTGTTTCCTTGGGTGGAGTTCCTCCAAAGGAGTCTACGATGCAAACACCTAGTGGAGATGACTGTGATTCTGTAAATTTTCACTACAATGCTGATAATGACCTGAAGCCTGTTTCTCCTCAAAGTATATTTGAGGCTGGTTCAGTAGCTGACATGTCTAGTAATGAAGATAATGTTTTGTCTCATGATGAGCTGGATTTAAAGTCTAACAAAAACTCTACGAACTTTACTGATGAATTTTGTGTGCCTGATGAAAACTATAAGATGAACAAAACGGTGGATGAGACTGCTGCTGCTGCTAAATCAAATTTTTGTTTGGACTCTGAAGCCTTGTCTGGTAGTGAAACTAAAATTGATGGCGAAGCAAGTATTGTTGAGTGCTTAGCCAGCAGAGTTGATGACTGTCCTGTTGGGCAGGGAAGAAGTATGGGAAGCCGTCCACCTTCTCTTTTATCTTATGAGAAAACATGTGGTGCTGAAATTGATGTGAATGGAGACTCTATTAGTGGAGAGGAGCCCAATCAGGAAGCAGGTACAGAAAGTGTTTTGCTTGCAGCGAGTGTTAATGTACAAACATGTGGCCTTGAAAATAAGGAGGATGTGCATTTTACTAGCCCAATGGAACAGTATAAACTTGATTCAGAGAAATTTGATAATGAGTCAATCCATGGTTTTTGCAGTAGAGCTGGACCAGATGAGGATCTCTTTAGTGAAGGCAAACAACAAAATGGTTTTGGAGGCTGTTCACTCGTTCCAGTCAATAATGACAAAAAATGTGGCAATTTTAATAATGTAAATGTGGTTTCAACTTCTGCACCAGCAGAATCCAAGCAAAAGAGAGGTTCTGAAAGCATTGATGAGAAATGTGTCAAAGATAATGTTCATACGGTTTCTATTAGCACAGTATCCAAGCTTAAACTCAATGCAATATATAACAGTGGGAACAAGGAGGTAATGATTGGTTGTGGCAGTGGTCATTCTGGAAGGGATGAGGATGCTGTTGCTAGGGTTGAACAGAAGAATTCTGAAAATTCTTTGATTAATTCGCCTCGGAAGGAGCCATTACGTGATATCGAGGAGTATATGAGAGCTGGTACTGCTTATACAATGGAGGAATTTGGGCTTGACGAAGGTTCTGAAAGCAGTTTGTTTATTCGTTCAGGTTATGAGCAAACATGTGGTGTCAATATTGATATTGGTAATACTTCTACAAGGAAAATGGAGGAGCCTAAACTTGATGAATTCCAAACTTACAGGAATGATGAACTTGCTTTTGACATCAGCAACAGTAGACCAAACGTGCAGGAAAGAAGTCTTGTGTTTTGTTCGCTTGTTCTGTCTGGGAATGAGCAAAAACGCAATGTTGAAGAAATTGCAACTGGGGTTATGAATAGCACAGAGGAAGCACCCAAGCAGGAAAGCAGTTTGGATACTGGCTTGCTTACTCGGTCTTGTACAGGGAAAACCATTGGTGATATATATAATATGAATAGTGTTTCAACTAGTCACAGCGAGGAACCAAAACATGATGAAGGCCAAAGCGGTAGCAATAATGAACTCATTCTTGACTTTGGCAACAATTACTCTGGAATAGTTGCAGATGTTGTCAACAGAGTTCCAATTGAGCGAACTTTTAGTTTTGAAACCTATCTGAGTAGGGGAAACAATAGTGTAGAGAAAGATCTAAAACTGGAAAGTGGTTTACTTGGTCCATCTTGTTATCCCAGTACCTGTGGTGATGAAAATAATTTGAACAGGGTTCACTCTGGTAGATTTTGGGAGGGCTCCATGATAGATGAGGTTGGCAGTTCTGGGCATGACAAGCTAACGATTGCTTTTGGAAGCAGCAATGCCCAACCAGATGGGAAGTATGATAGCATGTCTGGTTTCGAAGGGACACAATCAGGTCGCTCTGAGCACGTGGAGTTCAGTTTCCTGACTCCACAAAGTCTGAATCCTCTTCCAGTTGACTCCAAGGCTTTGTCATATGAAACAGAGATGCGCGGGTTTGATTCCTCGTTTTGGCTTGAAAAGGATGCTTTGTCGCTGAATATAGCTGCCAGGAATCATGTTACTACTGTATGTGCCTGGTGTAGAAATGAATTCCATCAGGACTCTGTTCACTCTGGAACACAAACAGGTGCAGTTGTTTCTATATGTCCAACCTGCAGTGCAAACGTTTCAGCGCAATTCAATTTCTTCTAG
Protein Sequence:
- >Achn265511|Actinidia_chinensis|C2H2|Achn265511
MNQKDTEQEGHDDVKCPNGRQFVSCKEVSSYLLSLGLQDVNRRNCGQSSENTQLTYKVACGNSADLAVKEINERGDLVCYSSSVITYVSNDHVKHVTSVVENSGEIQSGEILKCDKCTMTFDVKDDLLHHLLSSHRRKRSRFGSSITDGVIIKDGQYECQFCHKSFNERNRYNGHVGAHKRYHLNEASPGVLSMQNSVGPVSLGGVPPKESTMQTPSGDDCDSVNFHYNADNDLKPVSPQSIFEAGSVADMSSNEDNVLSHDELDLKSNKNSTNFTDEFCVPDENYKMNKTVDETAAAAKSNFCLDSEALSGSETKIDGEASIVECLASRVDDCPVGQGRSMGSRPPSLLSYEKTCGAEIDVNGDSISGEEPNQEAGTESVLLAASVNVQTCGLENKEDVHFTSPMEQYKLDSEKFDNESIHGFCSRAGPDEDLFSEGKQQNGFGGCSLVPVNNDKKCGNFNNVNVVSTSAPAESKQKRGSESIDEKCVKDNVHTVSISTVSKLKLNAIYNSGNKEVMIGCGSGHSGRDEDAVARVEQKNSENSLINSPRKEPLRDIEEYMRAGTAYTMEEFGLDEGSESSLFIRSGYEQTCGVNIDIGNTSTRKMEEPKLDEFQTYRNDELAFDISNSRPNVQERSLVFCSLVLSGNEQKRNVEEIATGVMNSTEEAPKQESSLDTGLLTRSCTGKTIGDIYNMNSVSTSHSEEPKHDEGQSGSNNELILDFGNNYSGIVADVVNRVPIERTFSFETYLSRGNNSVEKDLKLESGLLGPSCYPSTCGDENNLNRVHSGRFWEGSMIDEVGSSGHDKLTIAFGSSNAQPDGKYDSMSGFEGTQSGRSEHVEFSFLTPQSLNPLPVDSKALSYETEMRGFDSSFWLEKDALSLNIAARNHVTTVCAWCRNEFHQDSVHSGTQTGAVVSICPTCSANVSAQFNFF*