Information report for Achn247371
Gene Details
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Functional Annotation
- Refseq: XP_028122015.1 — protein indeterminate-domain 7-like
- Refseq: XP_028122016.1 — protein indeterminate-domain 7-like
- TrEMBL: A0A2R6Q314 — A0A2R6Q314_ACTCH; Protein indeterminate-domain like
- STRING: cassava4.1_005370m — (Manihot esculenta)
- GO:0006508 — Biological Process — proteolysis
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0004222 — Molecular Function — metalloendopeptidase activity
- GO:0005524 — Molecular Function — ATP binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g008724m
- Manihot esculenta: Manes.03G049100.2.p, Manes.03G049100.1.p, Manes.04G140300.1.p
- Nicotiana tabacum: XP_016479410.1, XP_016479409.1
- Petunia inflata: Peinf101Scf06241g00003.1
- Populus trichocarpa: Potri.006G227600.2, Potri.006G227600.1
- Sesamum indicum: XP_011081678.1, XP_011081677.1, XP_011081679.1
- Solanum lycopersicum: Solyc08g063040.2.1
Sequences
CDS Sequence:
- >Achn247371|Actinidia_chinensis|C2H2|Achn247371
ATGATGATGAATGGTGTGATGTTAGATGACAGTATGTCAAATTTGACCTCTGCATCAAACGAAGCAAGCATATCTTCAAGTAACAGAAATGAAGTCATTGGTGGCGGTATTTTGTACCCTCAAGCACCAAATCAACCACCACCTCCAAAGAAGAAGAGAAATCTCCCAGGCAATCCAGACCCGGGAGCAGAAGTGATAGCCCTGTCCCCGAAAACCCTAATGGCAACGAACCGATTCATTTGCGAGATTTGCAACAAGGGCTTCCAGCGGGACCAAAACCTCCAGCTCCACCGAAGAGGCCACAACTTGCCATGGAAGCTCAAACAAAGAAACAAGGAGGAGGTGGTGAGGAAGAAGGTGTATGTGTGTCCGGAGGCCGGGTGCGTGCACAATGATCCCTCACGGGCACTGGGGGACCTCACCGGGATCAAGAAGCACTTCTCGAGGAAGCACGGCGAGAAGAAATGGAAGTGCGAGAAGTGCTCGAAGCGGTATGCGGTTCAATCGGATTGGAAAGCTCATTCCAAGATTTGTGGCACAAGGGAGTATAGGTGTGATTGTGGCACCCTCTTCTCAAGGAGGGACAGTTTCATCACCCACAGAGCCTTCTGTGATGCTCTAGCAGAAGAAACCACCAGATCATCAAACCACCTCACCCCAAACCCATTTTTTTCTTCCCAAACTACCCCTCACTTCTCCCTCCAAAACAACTTCCCAGTAGCACTCAAGACAGAAGTACAAGACCAAACTCATACCCAAAGCTTCAACCAGCTCCCTCCATGGCTAGCCCACCAACCAAACCCTGTGGACCTCCCCACCCAATTATTCTCCCCAAGATTTGAAAACCCTAACCCTAGCCCTCAAATGTCTGCCACAGCACTGCTGCAAAAAGCAGCCCAAATGGGTGTGACTATGAGCAAAAATGGCTCATCAACTGCTTCAGAGACTGTTCTAATCAGGCCCCACCAGTTGGCCCACATGAGCTCCGGGCCTGCCTCTGGGCTGGGTCTGGCCTCATGTGACGACATGGGAAATGGACTTTTGTTTGGGAATATTAAGGCTGGTGGTGGGGGGAATGTTAGTGTCAGCTCTGGGTGCATGGAACAAGTTGGTGCATCCATGATGAGTGGTGGTGGTGGTTCCTTGCCTTGTGGGAGTGGGTTTGATGGGTCATCAGCAGCAGCTTCATCCTTTGAAGAGGCGTTGAATGGGATGTTGATGAACCCAAAAATGGATCCATTCTTGGAAACAACCCATTTGAGGAGGAGTAATGAAGGGAATACACTTTTGAGTGCTCAAGAGAGATTTCAGTCAAGTTATGTGGGCAGTTTCGCTCGCAGAGTACGTGATAGAGATGGATCCAGTGATGCTGCATATCTCAAAGAGTTTTATCATCAAAATGATCCTGAGGCTGTGATAAGGCTATTTGAAAGTCAGCCTTTATTGCATTCTAATACTTCAGCTCTTGCTGAGTACATGACAGCATTGGTCAAAGTTGATAGGTTGGATGAAAGTGAGTTACTGAAAACTTTGCAGAGAGGTGTAGGAGCACTTATTGAGGATAGAGGAATTAGTAAAGGACTTGGTCTAAACGAGAGGTGCAAGCCAATAGATGCCATAGGAGGAAGCCGTAACCCAAAGGACCAGCAATACATGAAAATGACCCTGAATCAGTTGCTTGTGGAACTGGATGGCTTTAAACAAAATGAAGGGATCATTGTGATTGCTGCAACTAATTTCCCAGAATCATTGGATAATGCATTGGTGAGACCTGGAAGGTTCGATCTTCACATTGTTGTCCCAAATCCTGATGTTGAAGGGCGGAGGCAGATTTTGGAATCTCATATGTCAAAGGTTTTGAAAGCAGATGATTTTGATATGATGATCATTGGCAGAGGAACTCCAGGCTTCTCAGGCGCTGATCTTGCAAACTTGGTCAATATTGCAGCTCTCAAGGCTGCGATGGATGGTGCTAAAGCTGTGAGCATGGCTGATCTAGAGTATGCAAAGGACAAGATCATGATGGGAAGTGAGCTCAAATCAGCTGTTATATCTGATGAGTCACGACGACTGACTGCTTTCCATTAG
Protein Sequence:
- >Achn247371|Actinidia_chinensis|C2H2|Achn247371
MMMNGVMLDDSMSNLTSASNEASISSSNRNEVIGGGILYPQAPNQPPPPKKKRNLPGNPDPGAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKEEVVRKKVYVCPEAGCVHNDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAEETTRSSNHLTPNPFFSSQTTPHFSLQNNFPVALKTEVQDQTHTQSFNQLPPWLAHQPNPVDLPTQLFSPRFENPNPSPQMSATALLQKAAQMGVTMSKNGSSTASETVLIRPHQLAHMSSGPASGLGLASCDDMGNGLLFGNIKAGGGGNVSVSSGCMEQVGASMMSGGGGSLPCGSGFDGSSAAASSFEEALNGMLMNPKMDPFLETTHLRRSNEGNTLLSAQERFQSSYVGSFARRVRDRDGSSDAAYLKEFYHQNDPEAVIRLFESQPLLHSNTSALAEYMTALVKVDRLDESELLKTLQRGVGALIEDRGISKGLGLNERCKPIDAIGGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDNALVRPGRFDLHIVVPNPDVEGRRQILESHMSKVLKADDFDMMIIGRGTPGFSGADLANLVNIAALKAAMDGAKAVSMADLEYAKDKIMMGSELKSAVISDESRRLTAFH*