Information report for Achn193931
Gene Details
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Functional Annotation
- TrEMBL: A0A2R6PKK3 — A0A2R6PKK3_ACTCH; Zinc finger protein like
- GO:0044794 — Biological Process — positive regulation by host of viral process
- GO:0005788 — Cellular Component — endoplasmic reticulum lumen
- GO:0005886 — Cellular Component — plasma membrane
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0005515 — Molecular Function — protein binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Gossypium arboreum: Cotton_A_32868_BGI-A2_v1.0
- Juglans regia: WALNUT_00017188-RA, WALNUT_00017194-RA
- Lactuca sativa: Lsa018113
- Manihot esculenta: Manes.09G069600.1.p, Manes.08G005700.1.p
- Nicotiana benthamiana: Niben101Scf05486g00005.1, Niben101Scf06397g04009.1
- Nicotiana tabacum: XP_016463819.1, XP_016463820.1
- Petunia inflata: Peinf101Scf02156g00010.1
- Populus trichocarpa: Potri.006G129300.1, Potri.006G129300.2, Potri.016G088500.1
- Sesamum indicum: XP_011094681.1
- Vitis vinifera: GSVIVT01025658001
Sequences
CDS Sequence:
- >Achn193931|Actinidia_chinensis|C2H2|Achn193931
ATGTCCGGTGATGTGATCTCTTCAATCAAAGGGTTTGGTCAACAAGTAGATCCAAACCCTAACCCTAACCCTAAACCCATCACCAATACAGTGCCCAAGAAGAAGAGAAATCTACCAGGAACACCAGATCCAGATGCAGAGGTGATTGCTCTATCGCCAAAATCCCTAATGGCCACGAACCGATTCATCTGCGAAGTCTGCAACAAGGGATTCCAAAGGGACCAAAACTTACAGCTTCACCGGAGAGGCCACAACCTGCCATGGAAGCTGAAGCAACGCGCCAACAAGGACCAGATCCGAAAGAAGGTGTACATATGCCCGGAAAAGACCTGTGTCCACCACGACCCGGGCCGGGCCCTCGGCGACCTCACAGGGATCAAGAAACACTTTAGCCGGAAGCACGGGGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAATACGCGGTTCAATCGGACTGGAAGGCCCATTCCAAGACCTGTGGGACGAGGGAGTACAAGTGTGACTGTGGCACGCTTTTCTCAAGAGCATTCTGTGATGCCTTGGCTGAGGAAAGTGCAAGACTCACATCTGTTGCAGCAGCTACCACTACTACAATGAACTTCAGAAATGAGTCTAATTTGAATGAGGGTTTCAATAACAATAACAATACTGCTCAGCCTAATTTACCGGCTGGAATCGCCGGAATTTCACAATTTGGTGGAGATTTTGGGCCAAGCTACGGTGGTGTGGCTGCCGGGAATTCACTGATAGGTGAGCAGCAGAAGCCTGGACTGTCACTGTGGTTGGATCAGGCAAATTCTCAGCTTAATGCTATAGGCTCTACAAGTTCTTTGCCTGATGTGTTGCAAATGCCACCTTCAAATCTGTTTAACTCATCAACAATGGCCAATTTTGGTACCTTAAATCAGTCCCAATGGGTTGACAAGATAAACGTTGCAACTTCAAAATCCGCAAATCTCTACTCCGACAACCAGAACCACCATCCGAATTCGCCGGTGCCACCCATGTCCGCCACCGCGCTGCTTCAGAAGGCCGCACAAATGGGGTCCACAAGAAGCAACCCATCATTCACGGGCAACAATTTTGGACTCATGAATTCCAATATAAATAATGCTCTGTCTCACGGCAGAAACGATCAGTCATGTCATTTGGTGGACCATGAACAAGCATCGGAGATTTTAGTTGGCCCGGTCAACTTACCGGCCCGTGATTCGTTAATGGGTAGTTCAAGTCTGAGCTCCTTGACTAGTGCTGCATCAAGTTTGAATTCAACGGTTCCGTTGAAGTTGCACCCGGGTTCAAACCGCATCGAACATGATCTGACCAGGGATTTTTTAGGCATGGGAGATGGAAAACCTGGTGATGCTGCTGAGTTGTTTGGGAGAGTTTCACAAAGTATAAAGGTGAAACGCTATAGTGAGGCGCTTGATGATCTAAATTCTGCTATAGAGGCAGATCCAACACTTTCAGAAGCATATTGGCATCGTGCATCTATTCTTCGTCAATTGTGCAGATATGAGGATTCAGAGAACAATTATAAAAAGTTTCTGGAGATGATACCTGGAAATTCGGCTGCAGAGAAGGAACTTTCTCAATTGTTGCAGGCACAGAGTGCTCTCGAGACAGCTAAGAGTCTCTTTGATTCAGGCGACATGACAAAACCATTGCATTATATCGATAAAGTTGTACTTGTATTTTCTCCTGCGTGTTCAAGGGCCAAACTTCTTAAGGTGAGGTTGTTGTTAGCTGCTAAAGATTATTCAGGTGCCATCGCTGAGACTGGATATCTTCTTAAAGAAGATGAGAATAATCTGGATGCCTTACTGCTTCGTGGTCGTGCCTACTATTATTTAGCTGATCACGATGTTGCTTCAAGGCATTTCCAGAAAGGTCTCCGTTCGGACCCAGAGCATAGCGAACTGAAGAAAGCATATTTTGGATTGAAAAATTTACTCAAGAAGACTAAAAGTGCAGAAGATAACGTAAATAAGGGTAAGCTGCGTCTTGCAGTGGAGGACTATAAAGCAGCGCTTGCTCTGGACCCAAATCATTTGGCACACAACATACACCTTCATCTTGGTTTGTGTAATATCTTGGTTAAGCTTGGTTACTTAATCGGTTCAAGGCATTTACCTCATGATTATATTTGTCAGAGAGGTGAAGCAAAACTTCTGATAGAAGATTGGGAGGGAGCTGTGGCAGATCTAAAATCTGCAGCTGAAAAATCACCTCAGGATATGAATATTCGTGAAGTGTTGATGAGGGCAGAGAAGTCACTAAAGTTGAGCCAGCGAAAGGACTGGTACAAGATTTTGGGAGTTTCGAAGACTGCTTCTGTATCAGAGATCAAACGGGCTTACAAAAAACTTGCGTTGCAGTGGCACCCGGATAAGAATGTTGACAATAGAGAAGAAGCAGAGGCCAAATTCCGAGAAATAGCTGCTGCATATGAGGTCCTCGGAGACGAAGATAAACGTACAAGATATGACAGAGGGGAAGACATTGAAGACATGGGGATGAATACAGGGGGTGGTGGATTTAACCCTTTTGGTGGTGGGGGACAGCAGTTCACATTTCACTTTGAAGGAGGGTTTCCCGGTGGTGGCTTTCCTGGTGGATTCAATTTTTGA
Protein Sequence:
- >Achn193931|Actinidia_chinensis|C2H2|Achn193931
MSGDVISSIKGFGQQVDPNPNPNPKPITNTVPKKKRNLPGTPDPDAEVIALSPKSLMATNRFICEVCNKGFQRDQNLQLHRRGHNLPWKLKQRANKDQIRKKVYICPEKTCVHHDPGRALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRAFCDALAEESARLTSVAAATTTTMNFRNESNLNEGFNNNNNTAQPNLPAGIAGISQFGGDFGPSYGGVAAGNSLIGEQQKPGLSLWLDQANSQLNAIGSTSSLPDVLQMPPSNLFNSSTMANFGTLNQSQWVDKINVATSKSANLYSDNQNHHPNSPVPPMSATALLQKAAQMGSTRSNPSFTGNNFGLMNSNINNALSHGRNDQSCHLVDHEQASEILVGPVNLPARDSLMGSSSLSSLTSAASSLNSTVPLKLHPGSNRIEHDLTRDFLGMGDGKPGDAAELFGRVSQSIKVKRYSEALDDLNSAIEADPTLSEAYWHRASILRQLCRYEDSENNYKKFLEMIPGNSAAEKELSQLLQAQSALETAKSLFDSGDMTKPLHYIDKVVLVFSPACSRAKLLKVRLLLAAKDYSGAIAETGYLLKEDENNLDALLLRGRAYYYLADHDVASRHFQKGLRSDPEHSELKKAYFGLKNLLKKTKSAEDNVNKGKLRLAVEDYKAALALDPNHLAHNIHLHLGLCNILVKLGYLIGSRHLPHDYICQRGEAKLLIEDWEGAVADLKSAAEKSPQDMNIREVLMRAEKSLKLSQRKDWYKILGVSKTASVSEIKRAYKKLALQWHPDKNVDNREEAEAKFREIAAAYEVLGDEDKRTRYDRGEDIEDMGMNTGGGGFNPFGGGGQQFTFHFEGGFPGGGFPGGFNF*