Information report for Achn022801
Gene Details
|
|
Functional Annotation
- TrEMBL: A0A178VKM1 — A0A178VKM1_ARATH; Uncharacterized protein
- GO:0006412 — Biological Process — translation
- GO:0005618 — Cellular Component — cell wall
- GO:0009506 — Cellular Component — plasmodesma
- GO:0016020 — Cellular Component — membrane
- GO:0022627 — Cellular Component — cytosolic small ribosomal subunit
- GO:0003723 — Molecular Function — RNA binding
- GO:0003735 — Molecular Function — structural constituent of ribosome
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT2G41840
- Arachis hypogaea: Ahy014032
- Citrus sinensis: orange1.1g023000m
- Daucus carota: DCAR_009058
- Glycine max: Glyma.02G183100.3.p, Glyma.02G183100.2.p, Glyma.02G183100.1.p
- Gossypium arboreum: Cotton_A_07818_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G1153, Gh_D09G1159
- Juglans regia: WALNUT_00014012-RA, WALNUT_00022405-RA
- Manihot esculenta: Manes.09G023500.1.p
- Prunus mume: XP_008240892.1
- Prunus persica: Prupe.7G063400.1.p
- Ricinus communis: 29761.m000413
- Salvia miltiorrhiza: SMil_00019580-RA_Salv
- Ziziphus jujuba: XP_015898971.1
Sequences
CDS Sequence:
- >Achn022801|Actinidia_chinensis|C2H2|Achn022801
ATGGCTGAGAGAGGCGGCGACCGAGGCGGATTTGGACGGGGCTTCGGCCGCGGAGGCAGGGGGGGCGACCGCGGAGGCAGGGGAGGCCGCCGCCGCAACCCCCGCCGCGAGGAGGAGGAGAAATGGGTCCCGGTTACCAAGCTCGGTCGCCTCGTCAAGGACGGAAAAATCCAAACCCTAGAGCAGATCTACCTCCACTCTCTCCCAATCAAGGAACACCAAATCATCGACACCTTAGTCGGACCGTCACTGAAAGACGAGGTCATGAAGATCATGCCGGTCCAGAAGCAGACTCGGGCCGGTCAGCGAACCCGGTTCAAGGCCTTCGTGGTGGTCGGCGACGGCAACGGTCACGTCGGGCTTGGAGTAAAGTGTAGCAAGGAGGTGGCTACGGCGATTCGGGGCGCGATTATTCTGGCGAAGCTGTCGGTGATTCCGGTGAGGAGAGGCTATTGGGGAAACAAGATCGGGAAGCCGCACACGGTGCCGTGTAAGGTTACCGGAAAGTGTGGCTCCGTCACGGTGCGGATGGTTCCAGCGCCTCGAGGTGCCGGGATTGTGGCGGCGAGAGTGCCGAAGAAGGTGCTGCAGTTTGCTGGAATTGAGGATGTGTTCACTTCCTCACGGGGCTCGACCAAAACTCTCGGCAATTTCGTTAAGGCAACTTTTGATTGTTTGCTGAAGACTTACGGCTTCCTTACCCCCGACTTTTGGACGGAGACTAGCTTCTCAAGATCTCCATACCAAGAATTTACAGATCTTCTGTTGGCAAAGCCCTCCTCCTCAAAGATAACTTTTGTGGAAGATGTTCCTGAGAGGGTGTTCTGTTTAGAGCACCGAAGCTACATTAAACACGAATGTCCAAAAGCCAACAAACAAGATGTAACTGTTGTTATCTGCCCACTCTGTGCAAAAGGAGTTCGCCTGATTCCTGATGAAGACCCAAACATTACTTGGGAGTCACATGTTAATACCGAGTGTGACCCATCAAACTATGAGAAAGCCACAAAGAAAAGAAAATGCCCCGTCCGTGGCTGCAGAGAGATGCTAACATTCTCAAACACAATTAAGTGCCGTGATTGTACTGTAGATCATTGCTTGAAGCACCGGTTTGGGCCCGACCACAATTGTCCTGGACCCAAGAAAGCAGACACATCTTTTCAATTCATGAGTTTTATGAATAAGAGTAGAAAAGAAGAGCCAAAGCCCGCCAGTTGGACTCCAGCCACATCTTCATCCAAATGGTCTACGAGCTTGCTTAATGCGGCCTCAAGTTTTCGAGCCACAGCCGAAGCTGGAATGGCAAAATTGAGTAGTGAGTTCAGCCAAAAGATGCAGACGACAAGGGATGGAGTGGGCCCGAGCAGCAGCGGCTGCAGCAGTGGTGGTGGTAATCAAGTGGAGCAGTGTCCACAGTGTAACATGAGGTTTTCTTCTGTCACTGCTCTGGTGGAGCATGTGGAGAAAGTTCATGAAAGGAACGACGGTCGGGCAGGTGTTATGAAGGTCACCATCGATGTATGCCCCAAGTGTAGTAAAGGTTTTCGGGATCCAGTAGCCCTTGTGAAGCATGTTGAGAGGGACCATGGAGGCACTTCAAAAGCTTAG
Protein Sequence:
- >Achn022801|Actinidia_chinensis|C2H2|Achn022801
MAERGGDRGGFGRGFGRGGRGGDRGGRGGRRRNPRREEEEKWVPVTKLGRLVKDGKIQTLEQIYLHSLPIKEHQIIDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPDFWTETSFSRSPYQEFTDLLLAKPSSSKITFVEDVPERVFCLEHRSYIKHECPKANKQDVTVVICPLCAKGVRLIPDEDPNITWESHVNTECDPSNYEKATKKRKCPVRGCREMLTFSNTIKCRDCTVDHCLKHRFGPDHNCPGPKKADTSFQFMSFMNKSRKEEPKPASWTPATSSSKWSTSLLNAASSFRATAEAGMAKLSSEFSQKMQTTRDGVGPSSSGCSSGGGNQVEQCPQCNMRFSSVTALVEHVEKVHERNDGRAGVMKVTIDVCPKCSKGFRDPVALVKHVERDHGGTSKA*