Gene Details:

  • Gene ID: AC149475.2_FGP005
  • Gene Name: LOC100381553, ZEAMMB73_575839
  • Gene Family: C2H2 family
  • Description: C2H2 family protein
  • Species: Zea mays
  • Source: C2H2 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_008658772.1  — uncharacterized protein LOC100381553 isoform X2
  • Swissprot:  Q10RP4  — SE14_ORYSJ; Lysine-specific demethylase SE14
  • TrEMBL:  A0A1D6PJW6  — A0A1D6PJW6_MAIZE; Putative lysine-specific demethylase ELF6
  • STRING:  AC149475.2_FGP005  — (Zea mays)

Gene Ontology:

  • GO:0009741  — Biological Process — response to brassinosteroid
  • GO:0009826  — Biological Process — unidimensional cell growth
  • GO:0033169  — Biological Process — histone H3-K9 demethylation
  • GO:0045814  — Biological Process — negative regulation of gene expression, epigenetic
  • GO:0048577  — Biological Process — negative regulation of short-day photoperiodism, flowering
  • GO:0048579  — Biological Process — negative regulation of long-day photoperiodism, flowering
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003676  — Molecular Function — nucleic acid binding
  • GO:0032452  — Molecular Function — histone demethylase activity
  • GO:0046872  — Molecular Function — metal ion binding

Family Introduction:

  • Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.

Literature:

Sequences:

CDS Sequence:
  • >AC149475.2_FGP005|Zea_mays|C2H2|AC149475.2_FGP005
    ATGTCGCCTCCGCCGGCGGTGGCGACGGGCGGTTCCGGAGAACCCACGGTGCCGGCGTGGCTCCGCGGCCTCCCGCGCGCCCCGGAGTACCGCCCCACGGAGTCGGAGTTCGCCGACCCCATCGCCTTCCTCTCCCGCGTGGAGCGCGAGGCCGCCGCCTACGGCATCTGCAAGGTCATCCCGCCCTACCCGCGCCCCTCCCGCCGCTTCGTCTTCGCGCACCTCAATCGCTCCCTCGTCTCCTCCTCTGAAGCCGCCAACCCCACCACTGCCTCCGGCTCCTCCGCCACTGCCCCCTCGCTGCCGGAATCCGCCGCTGTGTTCACGACCCGTCACCAGGAGCTTGGCACGCCGCGGCGTGGGCGACCGCCTCCGCAGGTGCTCAAGCAGGTGTGGCAGAGCGGCGAGCGGTACACGCTCGACCAGTTTGAGGCCAAGTCCCGCGCCTTCTCCAAGATCCACCTCGCTGGGCTTCGCGAGCCTACTCCACTAGAGGTGGAATCCCTTTTCTGGAAGGCGTCCGCTGACAGGCCTATCTATATCGAGTATGCGAATGACGTTCCGGGGTCTGGCTTTGCCGCCCCAAAACAGTCCCAGCGGCACAAGAAACGGAGACGAGAGAGCGATCAGGTGGAAGAGGGGGAGAAAGGCTCTGGGTGGCGGCTCTCAGGAAGCCCATGGAACCTCCAGGCGATTGCGCGGGCTCCTGGTTCGCTTACGCGATTCATGCCAGATGATGTGCCTGGGGTTACCTCGCCAATGGTGTACATCGGGATGCTCTTTAGTTGGTTTGCATGGCATGTAGAAGATCATGAATTGCACAGTCTCAACTTCCTTCACACCGGTGCACCCAAGACATGGTATGCAGTCCCTGGGGACCGAGCCTCAGAGCTCGAGGAAGTTATTCGTGTACATGGATATGGAGGAAACCCTGACCGCCTTGGTATTTGTCCTTTCTCATGCTCGCCGTCTGAATGTTTCGGTTGTGGTCTAGCAGGTACAAGCTCTGAAATGGCCAGCGTTTCCATTGGGTCAAATGTTCATGATATTATTCAGACATCAGATTCTTATGAATTCTTTGCTGATATGTACTGTTTCAGCTTTATTGAATTGATTGTGATGTGCTATTTGTTAACTATGTTTATTCCAGCTTTGCTAGATTTTCACCTTCATGGATTTAATTGTGGTGAAGCTGCCAACTTTGCAACTCCACAATGGTTAAAATTTGCTAAAGAGGCTGCCGTACGAAGGGCTGTGATGAATTATCTTCCGATGCTCTCTCATCAGCAGCTTCTGTACTTGCTAGCAGTTTCTTTTATAACCAGAACCCCAAATGTATTGTCTGGAATTCGTTCTCGCTTGAGAGATCGGAAAAAAGAAGAAAGAGAACTGCTGGTGAAGCAGGAATTCTTGCAGGACATGATTAGTGAAAACAAGCTTTTGTGTTCTTTCCTGGAAAAGAAATCAATTCGTCATGTTGTGCTCTGGGAGCCTGACTTGTTACCATCTTCGACTGCTCTACATTCCTGTTCTTCTGGCTCAAAAGCTCCTGAGAAGAAGTCTGAGGATGGTTGCAGAATTGAATCTAGTGAACGTGGCACCAAAGATAACAGCTCTGATGGCAGTGCACATATGATTGGCGCACAAACTAAATTTATGTCCGGGAATAGCAAATCATCTGGAACTGCATCTGCTTCCATGGATGAGGTCAATGCTGATACTGATGATGAGGATGACCTACCTTTTGATTTGAGCATTGATTCTGGGTCATTGACCTGTGTTGCTTGTGGAATTCTTGGTTATCCATTCATGGCAATTCTGCAACCTTCAAGAGAAGTATTGGAAGGGATTTCCCTTGCTCACACGAGTAGATACAAGATGAGTTCTGAAAAAGATAATTGTTCAAACACAATTCCATGCTGTCCCACTGACAGATGTTCATTTGTTCCCAGTAGACCTTCTTGGCCTGCGGAACAGCAATGTCTGGCTACTCCTTTGGGGCAAGCTAACATCAGTCATCAGAATGTAAATTCACATAAAGATGTTTGTTTAAGGGAGAATGAACCTAATGGGCCTGTGCCACAATGTAACAATATTTCACATTCTTGCAGAAGTGAAAATACTCTTCATTCATGTAGTGACAGGGGAAAATCCGAGAATAAGATTTCTGAGGACAGTCTTGGCCCAGAAGTAGGTGAACAAACAGGCAAATATGTCATCAATGCGCAAGCTGCAGAAAGTTCTGATGGTACTATTAACTGGAATACTTATTGTACATTTGCACGGCCCCGGATCTTTTGCCTGCAGCATGCCCTTGAGATTGAAAAGTTGCTTGAGGGCAAAGGCGGTGTCCATGGTCTCATTATTTGCCACTCAGACTTTGTCAAACTAAAAGCACTTGCAATATCAGTAGCTGAGGAAATTGAGTTTCAATTTGATTGTACAGACATTTCACTTGCAAAAGCATCAAAGTCTGATTTACATCTGATCAATATTTCAATTGACGACGAGGGACATGAGGAAGATGGAAGAGACTGGACGTCACAGATGGGTCTAAACCTGAAATATTCTGCCAAACTCAGGAAAGAGAAATCAGAAAATCAAGAACAGTCTCCTTTGCCATTTGGGGGACTGCTTTCCTGCCCTTCGCCTGTTTCGGTTGTTCCTAATCTTAAGTGGCTTTGCAAAAGAGCGCGGACACCATACACAGTTATTGGTACTATGAGGGGTTCTAGTGCAACAGCAACTGCTGCGGAACTTAAGCCTGGAGTGAAAACAGAAATATTCACTAATGGAAATGTTTGCGAGGATGACAATAGACATCATTCTTTTCGACAAACTGGCCTCGAGCAACCAGGTGGACTGCAAGATTGTGATAAGCCTTCATGTTCCGAGGAGAATGGCCATGGAAGACATTGTCTTGTTAACATTCCTATCGCTGTTGCTGAATATCCTATGATGCATCAAGTCCGTGAGGGTCCAGTGAGTGTTAGCACGTGCAATGACTCCATTTGTTTGTCAGGTTCCCTGGATTTACCTCCACACGCCTCTCCAGTTGAAGTAACTAGATACCTAGGATGTATACAGTCAACTGAGCTGAGCAGTTTACCAGCCTTTTCTGTTCAACATTTCTTTAATGATGAAAGTACCTCTGTGGAAGGAAGCATAGACTGTGTAAGCAATGGCTGCTTAGAATCTCAGGATGATATTTTAGGGAGCAGAGATGAACGTTTGCAAGTTCAACAATATCAAGAGAAGATGGGGCTTCGCAATAACCCCAATATGAAGTCAGTTGATTCACACCTGATAGAAGGTTTGGCTGTATCAGAAGGAAAGCATGGGGAAACTGTGGCAGCATTCCTTGAAAACAAGGAGCGTTGTGCTAAGACATCCTACTGTTCTAATACTGAAACAAAAACTACTAAATCTGCAATAGACAATCGATTGGAGACTCATCATCTGGGTACTGGTCCAGTGAAACTAAATTCAAGCTTTAATGAGATGCACAGTGCTGATAGACAATGCAGTTTAGTCTTTGGCTGCCTTGACTCAGCTGATGTTCCTGCTTCAACTCAGGCTCTGTCAGTTTCACCTGTTTTGATGAGTGACGAGCAGCAGGTCGATGACGCCCATTCTGCTGTCAAGGCCATTGAGCACCTGGGCAATAATCTGGCTAACATAAAGCACAAATCCCTGCATATGGATGTCCTCATGTTAGAGGACGCCCAAGTTGCTTCCATGGCTGCAGTCCCTGGGCATGAGGGAGAATCTGTCGAGGCTGGATCAAATTCTTTTGATATTTTACTTGGAGCTCTGGCTGAAGAGTCCAAGGCAGCAGATGCTCCTGGGAAAGATGAAGTTGGCAAAGCTTCCTTGACATTAATAACACTGGCTAGCAACGAGCCCTCTGTTACAGAAGGCAGAGTTGTAGACGTGGTGGAAACAGACACAATTTTGGGAGCAGGAAAAGATGATAAACAACTTGACCAGCCACATGGCTTCCATTTGTCAGATCTGGTGTCTAGATGCATCGGGAGCTCAAATAGATCCGATATCATATGCTATGTCAGACGCAAACACAAAAGGAAGAGGGATTACTCGTGTTTCGTCCGCTCTCCCTGTGAGAGCTTGAGGCCAAGGTCCAAGCCTGCAGTAGTCGAGGAGTCGGAATGGAGCAGAACAGCCGAGGCTTCTTTTGCTAAAAGGGGTAAGAGGACACAAGCAGTGGGATCATTTCAGTGTGATATTGATCTGTGTGACATGGCATTTGAGACTAGGGCCGAACTCAATGCCCACAAGCGCAATATTTGCACTGACGAGTCATGTGGCAAGCGTTTCAGCTCACACAAATACTTGAAGCGACATCAGTGTGTCCACAGCGAGATGAGGCCATTTAAATGCCCCTGGGAAGGTTGTAAAATGACCTTCAAGTGGTTGTGGGCTCAGACTGAGCATGTCAGAGTGCACACTGGAGAGCGGCCATACAAGTGCTCGGCTCCTGACTGCGGGCAGACATTCAGATACGTATCGGATTACAGCCGGCACAGAAAGAAATTTAACCATTACTGA
Protein Sequence:
  • >AC149475.2_FGP005|Zea_mays|C2H2|AC149475.2_FGP005
    MSPPPAVATGGSGEPTVPAWLRGLPRAPEYRPTESEFADPIAFLSRVEREAAAYGICKVIPPYPRPSRRFVFAHLNRSLVSSSEAANPTTASGSSATAPSLPESAAVFTTRHQELGTPRRGRPPPQVLKQVWQSGERYTLDQFEAKSRAFSKIHLAGLREPTPLEVESLFWKASADRPIYIEYANDVPGSGFAAPKQSQRHKKRRRESDQVEEGEKGSGWRLSGSPWNLQAIARAPGSLTRFMPDDVPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHTGAPKTWYAVPGDRASELEEVIRVHGYGGNPDRLGICPFSCSPSECFGCGLAGTSSEMASVSIGSNVHDIIQTSDSYEFFADMYCFSFIELIVMCYLLTMFIPALLDFHLHGFNCGEAANFATPQWLKFAKEAAVRRAVMNYLPMLSHQQLLYLLAVSFITRTPNVLSGIRSRLRDRKKEERELLVKQEFLQDMISENKLLCSFLEKKSIRHVVLWEPDLLPSSTALHSCSSGSKAPEKKSEDGCRIESSERGTKDNSSDGSAHMIGAQTKFMSGNSKSSGTASASMDEVNADTDDEDDLPFDLSIDSGSLTCVACGILGYPFMAILQPSREVLEGISLAHTSRYKMSSEKDNCSNTIPCCPTDRCSFVPSRPSWPAEQQCLATPLGQANISHQNVNSHKDVCLRENEPNGPVPQCNNISHSCRSENTLHSCSDRGKSENKISEDSLGPEVGEQTGKYVINAQAAESSDGTINWNTYCTFARPRIFCLQHALEIEKLLEGKGGVHGLIICHSDFVKLKALAISVAEEIEFQFDCTDISLAKASKSDLHLINISIDDEGHEEDGRDWTSQMGLNLKYSAKLRKEKSENQEQSPLPFGGLLSCPSPVSVVPNLKWLCKRARTPYTVIGTMRGSSATATAAELKPGVKTEIFTNGNVCEDDNRHHSFRQTGLEQPGGLQDCDKPSCSEENGHGRHCLVNIPIAVAEYPMMHQVREGPVSVSTCNDSICLSGSLDLPPHASPVEVTRYLGCIQSTELSSLPAFSVQHFFNDESTSVEGSIDCVSNGCLESQDDILGSRDERLQVQQYQEKMGLRNNPNMKSVDSHLIEGLAVSEGKHGETVAAFLENKERCAKTSYCSNTETKTTKSAIDNRLETHHLGTGPVKLNSSFNEMHSADRQCSLVFGCLDSADVPASTQALSVSPVLMSDEQQVDDAHSAVKAIEHLGNNLANIKHKSLHMDVLMLEDAQVASMAAVPGHEGESVEAGSNSFDILLGALAEESKAADAPGKDEVGKASLTLITLASNEPSVTEGRVVDVVETDTILGAGKDDKQLDQPHGFHLSDLVSRCIGSSNRSDIICYVRRKHKRKRDYSCFVRSPCESLRPRSKPAVVEESEWSRTAEASFAKRGKRTQAVGSFQCDIDLCDMAFETRAELNAHKRNICTDESCGKRFSSHKYLKRHQCVHSEMRPFKCPWEGCKMTFKWLWAQTEHVRVHTGERPYKCSAPDCGQTFRYVSDYSRHRKKFNHY