Information report for Aan014418
Gene Details
Functional Annotation
- Refseq: XP_024978103.1 — probable lysine-specific demethylase ELF6 isoform X1
- Refseq: XP_024978112.1 — probable lysine-specific demethylase ELF6 isoform X2
- TrEMBL: A0A2U1QEP7 — A0A2U1QEP7_ARTAN; JmjC domain-containing protein
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn204031
- Brassica napus: BnaA10G0285500ZS, GSBRNA2T00136387001, GSBRNA2T00072972001, BnaC09G0604100ZS
- Brassica oleracea: XP_013611724.1, Bo9g181310
- Brassica rapa: XP_009122624.1, XP_009122623.1, Bra009474
- Juglans regia: WALNUT_00007284-RA, Jr07_34620
- Lactuca sativa: gene-LSAT_2X112720
- Nicotiana attenuata: A4A49_07168
- Nicotiana tabacum: XP_016451017.1, XP_016451016.1
- Petunia inflata: Peinf101Scf01444g00019.1
- Raphanus raphanistrum: RrC1477_p6
Sequences
CDS Sequence:
- >Aan014418|Artemisia_annua|C2H2|gnl|UG|Aan#S41966371;gnl|UG|Aan#S55032085;PUT-183a-Artemisia_annua-129860
NNTTCTGCTTACCATGCAGTCCTTTGGGATCTCGAATCCCTATCACCATCTGTAATCACAGAATCTGACTCGAAGAATATTGATGATATTCATGTTAAAAACGATAATAACTTGGATACCGAGACAGTTGTCAATATAGAGGATGAGGACATGTCAAGTGATTTTCAAATTGATTCCGGTTCGTTACCTTGTGTGGCTTGTGGTGTTCTTGGTTATCCTTTCATGTCTGTTATACAACCAACAACAAAGATGTTGATTGATGAAATGCCTGTCACGGGTCATGGCGTGGAATTGGTTGATTCCAAGGATCGGTCTCTTGAAGCTTCAACAAATTCATGTGAAATGAATGTTGAAAAGGGATGGAACATATCTAATGGATTTTTAAGACCTCAGATTTTCTGTTTAAAGCATGCAAGTAAAGTCATGGAACTGTTAGATTCTATGGGTGGGGCAAAACTGCTTATAATATGCCATTCAGATTTTCTGAAAATTAAGATACAAGTTTCAGCCATTGCAGAGCAGATTGGTAGCACATTCAGATATAACGAGGTTCGATTAGATGAAGCAACACAGGATGATTTGGACCTGATAAATCTTGCAATTGACAATGAGCAGGACGACGAGTCTGTAGAAGATTGGACTCTGAAATTGAATGTTAATCTTCGACAGTCTGTTAAACTCAGGCCTAAATCATCACCTGACAAGATACATAATGCTTTGATTATGGATGCATTATTTGCTGACGCTCCCACCTCAAGTGTTGACTCCCGTACAATGATTTTTCAGTGGCAAGCCACAAAATCACGCTCAAATAGAAAGCTAAACAGTTCAATCAAGAAATTTTCAAAGACTGTTGATGTGGAGGTGATAGACAATATATCTGAAGCTCAAATCCCTAAAAAGGGAGGGAGTTTAATTCAGTATTCAAGAAGAAAGTTCAAGTCAAAGAGGCAAGATACTGTAGCTAATCTCAGCAAAGACAGAAATGAAGACGATTTGTTGGTCTCGGGTGATTTATCAACTCCTGGAAACCCCGTTACACAGCAGGAAAAGGAGGATTCTGTTCTATCACAAGTTGGAGTGGACGTTATTGCACCTTTGGTGGCTGAAGATGCTGAGGCACACACTTCCATGGAGATGGAGGGAGGTTCAGAGTCATGTGCTACGACTCTTGAAAAATCTGGAACTGAGAAGGGTGAAGAAAGCGACTTGCAAAATGAAATCAGCTTTGTGGCAACTGATAATGGTTCTTTAGAGCAGGGTAGTGAAGATGGTTTGATGCAAGAAGACACTGAATTGACTAAGGATGGTGGGTCCTCTGCTGATGAACCTGTTATCGACTCGAATGATAATGTAAAGGAAGATCATGTTACTGATAATGACGAAAATAACCATGTTTCAAATTCAAAAAGTGGAGGTAAAAGGAAGAGAGAGGTGGAGTTGTTGCAAAGAGAGGAAAAATCTGACTTTGATGGATTTGTAAAAAGCCCATGTGAAGGATTGAGACCTAGAGGTGGGAAAGATTCTCTAAAAGGTGGGATTAATATCTCAACAAAAACAATTCCAGAAAAACCCACAAAGAAATCAAAACCTTCCAATGTCACTGAAAAACATGCAAAGAAACCAAAGGCTTCCAATGTCAAAACCTCTGAAAAAACTGAGCACAAGTCCCACAAGTGCGACATAGAAGGTTGCAAACTGAGTTTCAAGACTAAAACCGAACTAAGATTGCACCGAAAGAACAGGTGCCCTCATGTAGGATGTGGGAAGAAGTTCAAGTCACACAGATACGCAGTGATCCATGTACGTGTCCATGAAGATCACCGACCTCTTAAATGCACATGGAAAGGTTGTAAGATGACTTTTAAGTGGGCTTGGGCCCGGACTGAGCATATAAGGGTCCACACTGGAGAGAGACCCTATAAATGTAGTGTTGAAGGGTGCGGGCTCAACTTCAGGTTTGTTTCTGACTTTAGCCGACACAGAAGGAAAACTGGCCATAATGTACATGTAAAATCCTGA
Protein Sequence:
- >Aan014418|Artemisia_annua|C2H2|gnl|UG|Aan#S41966371;gnl|UG|Aan#S55032085;PUT-183a-Artemisia_annua-129860
XSAYHAVLWDLESLSPSVITESDSKNIDDIHVKNDNNLDTETVVNIEDEDMSSDFQIDSGSLPCVACGVLGYPFMSVIQPTTKMLIDEMPVTGHGVELVDSKDRSLEASTNSCEMNVEKGWNISNGFLRPQIFCLKHASKVMELLDSMGGAKLLIICHSDFLKIKIQVSAIAEQIGSTFRYNEVRLDEATQDDLDLINLAIDNEQDDESVEDWTLKLNVNLRQSVKLRPKSSPDKIHNALIMDALFADAPTSSVDSRTMIFQWQATKSRSNRKLNSSIKKFSKTVDVEVIDNISEAQIPKKGGSLIQYSRRKFKSKRQDTVANLSKDRNEDDLLVSGDLSTPGNPVTQQEKEDSVLSQVGVDVIAPLVAEDAEAHTSMEMEGGSESCATTLEKSGTEKGEESDLQNEISFVATDNGSLEQGSEDGLMQEDTELTKDGGSSADEPVIDSNDNVKEDHVTDNDENNHVSNSKSGGKRKREVELLQREEKSDFDGFVKSPCEGLRPRGGKDSLKGGINISTKTIPEKPTKKSKPSNVTEKHAKKPKASNVKTSEKTEHKSHKCDIEGCKLSFKTKTELRLHRKNRCPHVGCGKKFKSHRYAVIHVRVHEDHRPLKCTWKGCKMTFKWAWARTEHIRVHTGERPYKCSVEGCGLNFRFVSDFSRHRRKTGHNVHVKS