Information report for 912851
Gene Details
Functional Annotation
- Refseq: XP_002867079.1 — zinc finger protein ZAT3
- Swissprot: O65499 — ZAT3_ARATH; Zinc finger protein ZAT3
- TrEMBL: D7MD22 — D7MD22_ARALL; Zinc finger family protein
- STRING: scaffold_700593.1 — (Arabidopsis lyrata)
- GO:0048235 — Biological Process — pollen sperm cell differentiation
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT4G35280.1
- Brassica napus: GSBRNA2T00100065001, GSBRNA2T00071496001, GSBRNA2T00121385001
- Brassica oleracea: XP_013597140.1, XP_013594007.1
- Brassica rapa: XP_009138356.1, XP_009103468.1
- Raphanus raphanistrum: RrC3395_p4, RrC165_p8, RrC12150_p2
Sequences
CDS Sequence:
- >912851|Arabidopsis_lyrata|C2H2|912851
ATGAACAACAATCATTCCTTTTATGATCGCAATTTTCACATTCCACTTCATCCTTCTAACGCAAGTAACCCTAATCCAAATCTCCAGTTTGCTTTATCTTCAAGCTACGAACACAGTCCTAAGAAGAAACGCACCAAAACCGTTGCTTCATCTTCTAGTTCTTCACCAAAGTCCGCATCAAAACCCAAATACACCAGAAAACCAGATCCAAATGCCCCCAAAATCACTCGTCCATGTACTGAATGTGGCAGACAGTTTTGGTCTTGGAAAGCTCTCTTTGGTCACATGAGATGTCACCCTGAGCGTCAATGGCGTGGCATTAATCCTCCTCCTAACTACCGTGCCTCCACTACGGCTTCATCAAGACAACTAAACCAGAGATCACCAAATTGGGTCTCATTTATGTCTGAGGAAGACCATGAAGTCGCTTCTTGTCTCTTACTGTTGTCTAATGGCACACCATCATCATCGAGTAGTGAACGGTTTGAGTGTGGAGGATGTAAGAAAGTGTTTGGATCACATCAGGCTTTAGGAGGACACAGAGCGAGTCACAAGAACGTTAAAGGATGTTTCGCTATCACAAACGTAACCGATGATCCTATGACGGTTACTACTTCTAGTGATCAAGATCACAAGGCAAAAATCCTTACGTTTTCGGGGCATCATAAGTGTAATATCTGTTTTAGGGTGTTCCCGAGTGGTCAAGCTTTAGGAGGTCACATGAGATGTCACTGGGAAAGAGAAGAGGAGACGATGATCAGTGGTGCTTTGGATTTGAATGTTCCTGCAATACAGGATCTTTCTACTTCGGACACATCAGGGTGTTGTTTAGATCTTAGGTTAGGACTTTAA ATGTCAACCAGGGCGAGCACTCACCAAGAACCAGCAGAGAACGGAGCTAGTGGTTCAGACAACAACAACAACAACTTCAACTCGGCGATGAGAGAGCCCATGTTCCAGAAAGTGCTTACACCAAGCGACGTCGGGAAACTAAACCGGCTCGTGATTCCAAAGCAACATGCAGAGAACTACTTCCCGTTAGAGGACAATCAAACCGGCACGCTGTTGGATTTCCAAGACAAAAACGGCAAGATGTGGAGGTTCCGTTACTCGTATTGGAAAAGTAGCCAGAGCTACGTGATGACCAAAGGATGGAGCCGTTTCGTCAAAGAGAAGAAACTCAACAACGGAGACACCGTCTCGTTCCACCGTGGCTACGTCCCCGACGACAACGAACCGGAGCAACGAAGGAACATATTGTTCATCGACTGGAGGAATAGACCAGACACAAACCTCTTACACAACATTAATCATCATCACTACCCGATCTTGGGGCCTCCTCCTTATCCAACGGCTAGTTATTATCCTGTGACAGAATATTCCATGCCGCATTACGGGAGGTTTCCATCTTTATATCATAACCAGTTTCTAGGGTATGGTTATGGACCTTATGGTAAAACTGTTACTGGAGGGCGTTACTACGCCGGATCACCATTGGATCATCATCATCGGTGGAATCTTGGTAGATCTGAGCCGTTCTTTTATGACTCCTGTCCTGTTTTTCCAACGACGAGGTTGACTTCGTCCTTGGCGATGTTGCCGTCTTCTCCTCCTTCTCAGCCGCCGCAGGAGGGGACGGCCAAGAAGCTAAGGCTGTTTGGGTTCGATGTAGAGGAGTCTTCTTCTTCAGGGGAGGCACGTGCCGAAATGGGTGTTGCTGGGCACTCTTCTTCTTCTCCGGTTGTGATTAGAGATAATGAATCATCATGGAGGTCGCCACGTGGAGAAATGGGTGGATTGTCTTCTTCGGTTGTGAACTTAAGCGATGACGAAGACTATAAAAGGAAAGGGAAGTCTTTAGAATTTTAG ATGTCAACCAGGGCGAGCACTCACCAAGAACCAGCAGAGAACGGAGCTAGTGGTTCAGACAACAACAACAACAACTTCAACTCGGCGATGAGAGAGCCCATGTTCCAGAAAGTGCTTACACCAAGCGACGTCGGGAAACTAAACCGGCTCGTGATTCCAAAGCAACATGCAGAGAACTACTTCCCGTTAGAGGACAATCAAACCGGCACGCTGTTGGATTTCCAAGACAAAAACGGCAAGATGTGGAGGTTCCGTTACTCGTATTGGAAAAGTAGCCAGAGCTACGTGATGACCAAAGGATGGAGCCGTTTCGTCAAAGAGAAGAAACTCAACAACGGAGACACCGTCTCGTTCCACCGTGGCTACGTCCCCGACGACAACGAACCGGAGCAACGAAGGAACATATTGTTCATCGACTGGAGGAATAGACCAGACACAAACCTCTTACACAACATTAATCATCATCACTACCCGATCTTGGGGCCTCCTCCTTATCCAACGGCTAGTTATTATCCTGTGACAGAATATTCCATGCCGCATTACGGGAGGTTTCCATCTTTATATCATAACCAGTTTCTAGGGTATGGTTATGGACCTTATGGTAAAACTGTTACTGGAGGGCGTTACTACGCCGGATCACCATTGGATCATCATCATCGGTGGAATCTTGGTAGATCTGAGCCGTTCTTTTATGACTCCTGTCCTGTTTTTCCAACGACGAGGTTGACTTCGTCCTTGGCGATGTTGCCGTCTTCTCCTCCTTCTCAGCCGCCGCAGGAGGGGACGGCCAAGAAGCTAAGGCTGTTTGGGTTCGATGTAGAGGAGTCTTCTTCTTCAGGGGAGGCACGTGCCGAAATGGGTGTTGCTGGGCACTCTTCTTCTTCTCCGGTTGTGATTAGAGATAATGAATCATCATGGAGGTCGCCACGTGGAGAAATGGGTGGATTGTCTTCTTCGGTTGTGAACTTAAGCGATGACGAAGACTATAAAAGGAAAGGGAAGTCTTTAGAATTTTAG ATGTCAACCAGGGCGAGCACTCACCAAGAACCAGCAGAGAACGGAGCTAGTGGTTCAGACAACAACAACAACAACTTCAACTCGGCGATGAGAGAGCCCATGTTCCAGAAAGTGCTTACACCAAGCGACGTCGGGAAACTAAACCGGCTCGTGATTCCAAAGCAACATGCAGAGAACTACTTCCCGTTAGAGGACAATCAAACCGGCACGCTGTTGGATTTCCAAGACAAAAACGGCAAGATGTGGAGGTTCCGTTACTCGTATTGGAAAAGTAGCCAGAGCTACGTGATGACCAAAGGATGGAGCCGTTTCGTCAAAGAGAAGAAACTCAACAACGGAGACACCGTCTCGTTCCACCGTGGCTACGTCCCCGACGACAACGAACCGGAGCAACGAAGGAACATATTGTTCATCGACTGGAGGAATAGACCAGACACAAACCTCTTACACAACATTAATCATCATCACTACCCGATCTTGGGGCCTCCTCCTTATCCAACGGCTAGTTATTATCCTGTGACAGAATATTCCATGCCGCATTACGGGAGGTTTCCATCTTTATATCATAACCAGTTTCTAGGGTATGGTTATGGACCTTATGGTAAAACTGTTACTGGAGGGCGTTACTACGCCGGATCACCATTGGATCATCATCATCGGTGGAATCTTGGTAGATCTGAGCCGTTCTTTTATGACTCCTGTCCTGTTTTTCCAACGACGAGGTTGACTTCGTCCTTGGCGATGTTGCCGTCTTCTCCTCCTTCTCAGCCGCCGCAGGAGGGGACGGCCAAGAAGCTAAGGCTGTTTGGGTTCGATGTAGAGGAGTCTTCTTCTTCAGGGGAGGCACGTGCCGAAATGGGTGTTGCTGGGCACTCTTCTTCTTCTCCGGTTGTGATTAGAGATAATGAATCATCATGGAGGTCGCCACGTGGAGAAATGGGTGGATTGTCTTCTTCGGTTGTGAACTTAAGCGATGACGAAGACTATAAAAGGAAAGGGAAGTCTTTAGAATTTTAG
Protein Sequence:
- >912851|Arabidopsis_lyrata|C2H2|912851
MNNNHSFYDRNFHIPLHPSNASNPNPNLQFALSSSYEHSPKKKRTKTVASSSSSSPKSASKPKYTRKPDPNAPKITRPCTECGRQFWSWKALFGHMRCHPERQWRGINPPPNYRASTTASSRQLNQRSPNWVSFMSEEDHEVASCLLLLSNGTPSSSSSERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVTTSSDQDHKAKILTFSGHHKCNICFRVFPSGQALGGHMRCHWEREEETMISGALDLNVPAIQDLSTSDTSGCCLDLRLGL*