Information report for 62992
Gene Details
Functional Annotation
- Refseq: XP_002509335.1 — predicted protein
- TrEMBL: C1FJG9 — C1FJG9_MICCC; Uncharacterized protein
- STRING: XP_002509335.1 — (Micromonas sp. RCC299)
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- Numerous genes encoding the C2H2 zinc-finger domain have been characterized from a wide variety of eukaryotes, including plants. The canonical ZF (zinc finger) sequence (CX2-4CX3FX5LX2HX3-5H) contains two cysteines and two histidines that coordinate a zinc atom, creating a compact nucleic acid-binding domain. The majority of such proteins characterized to date are DNA-binding transcription factors, and many have been shown to play crucial roles in the development of plants, animals and fungi.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.3KG240000.1.p, Pavir.3NG095200.1.p
- Raphanus raphanistrum: RrC1477_p6
- Setaria italica: Seita.3G307200.1.p
- Setaria viridis: Sevir.3G311800.1.p
Sequences
CDS Sequence:
- >62992|Micromonas_sp._RCC299|C2H2|62992
ATGGATTTCAGGCAGAATCCCGGCTTCGCGCCCGGGCAGGCTGTGTTCTTGCCCCCCGGCAGCTGGCCCGGCAGCGGGTTGCCAGTCGCGCAATTCCAGTCGGACGGACGCGGCGGGATGATGGGAATGACCGCGGGACTGCAGGTGGCGATGGGGCAGAACCAGTCGATGATGATGGCCGCGCCGCCGCAGGGCCCCGCGGTCGCACAGGCGCCGGGCGGCCACGCGCACCACCCAAAGCCGAAAGTGACGTGCACGCACCCTGGCTGCGGAAAGGAGTTTGCGTGGCAGCAGGACCTCGCCAAGCACGTTCGCAGGTACCACAGCGGCGAGGAACCGCGTTTCGCGTGCACGCACGACGGTTGCGACAAGAAGTTCTACGAGCGCAAGCTCCTCGTCGCGCACGAGCGCACGCACACGGACGAGAGGCCCTTTGCGTGTAAGCACCCGGGCTGCGGCAAGGCGTTTCGAGCCAGGAACGCGCTGGCGTACCACCAGAAGGCGCTGCACGAGTCAGGCGTCGTGCTACGATGCACCGAAGACGGGTGCAGGTTCACCACGCGAAAGGCCGAGGCGCTCGCCACGCATAAGCTCCGGCACCAGCAGCGAGCCGCGGCGAAGGTTTGGAAGCAGCAGAAGAAGGGCGAGGTGCAGGCGGCGGTGAAGACGGCAAAGGAGGAGTTACGAACGAAGAGCGCGGAGCTCGTGAACGTGCAGAAACAGCTCGCGCAGGAGCAAAAGGCTCACGCCAAGGCGCTGAAAGAGCTCAACGCGCTCAAGGCGACGCACGCGAAGATGAAGAGGAAGGTCACGGCTTCCGCCACCGAGCTCGAGAGTCTCCGCCAGCAAAAGCGAGCGAGAACTGGCGGAGGCAAGGACGCCGGCGCGGTCGGCGGGAAGACTAAGGCGACCGGGAACGGCGCGGGCGGCGGCGGCGGCGGCGGCGTCGGCGGGGAGAGGAACGCGCCCGCGCTGATGCCGGAGATTGTCCTCCTCGACGGACCCACCGGCAAAATGCCGATGCTCGCGATGGACGCGCCGGCTGCGTTGACTGCCGCCGCGTCCTCCGCGCGGGCACGCGAATCCGACGCCGCCGCCGCGAGGCAGCTTGTCGACGGCGTCGTCGTTCCCGGAGCGGTCGCCGGGTTTGGTTATCCCGGCGGGGTGGGCACGCGCGTGGCGCCGCCGCCGCCACTCGCGACTACTCTGAACGTCAACGGGACGATGCGGAGGCTGCAGCCGGTTTGCGCGCAGGCGCTGCCGTGGTCCACGTCGTTCATCGGGTGCCCGGGGATCAAGTGCGACGACGGGCACGACTTCACCGAGCTTTTCCTCGAGGACGGGTCGAGGAACGCGGGCAATAGACGGACGACGCCGCTGGAGGTTGAGCACCCCAAGGACGTCGCGGCGTTTCACGCGCGAAGCACCAACTGCCCGTGGGCCAAGCCCAACCTCCAGGTCACCCTGGAGAAGGCTTCCGACCCCATGGCGCTCCACGCGTTGCTCAACGAGATCGCGCCCAAGAAGGCGCTCAAAGTGAAGCGCGTGGACGGTCAGTGCGCCGCGTGCTACGCGGCTCACGTGGCGTTGGCGGCGAGGCTCCGGGCGAAGCACAACGCTAAACCCGCGGGGGAGCCGGCGGCGGATGAGGTTGATGCGGCGGATGAGGTTGACGGGTTGGTCGAGGACGCGCTGGTCGACGGCGACGGCGACGGCGACGGCGATGACGATGATGCGGTTGCGGAGGAGACGCCTCGCGCCGTGCGGTCCAGGCGCGGCGTCTGA ATGTGTATACTCAAGGTGGCGAATTTTAGAAACAAAGCCAATTATAAGCCAATAAAAGATGATGAAGCTCGGAATATCAATGTGATGTTTTCTGGGATTAATAGAGAAGAGGAGATGTCAGTTATGGTTTCTGCACTGACACGTGTCGTGAGAGGTGAAGATAAAGTACTGAATCAAGGTGAAGGATGTGATAATATTGGTGCAGCTAATTCTGGTTTTTCTCCTTCTTTGAATGCAATTTCTGGAGTTGTTGGAGAGAAAAGAGGACGTGAAGAACAAAGTGGGCAACTGTTCTTGTCTGATATTAGGTCATCAGGTGGAGAAAGTTCAAATATTAGGCCTATTGCCAGCAACACACCAACAACAGAATCAACATTCCTATACATTACTCCCACATATGGAGAAGGAAATACTAATCATCAACCAAGAAGAAGATATAGAGGAGTTAGACAAAGGCCATGGGGAAAATGGGCAGCAGAAATCAGAGATCCATATAAAGCTGCTAGGGTTTGGCTTGGCACTTTTGACACTGCTGAAGATGCTGCTATTGCTTATGATGAAGCTGCTCTTAAATTCAGAGGCAGCAAAGCCAAACTCAACTTCCCAGAAAATGTTAAACTCTTGCCTACTTCTTCAACTCACGAACGATCACCATTGAAGTTATACTCGCATCAGAATACTGTCGGTAATCTGAGATTTTCTACGAGTACGTTGGATTCCGTGGAAAATACACGTGTTTCTAATAGTACTATTTCTCATGATTATACTCCAAATACCCTTTACAGTACTACTGTTTCTTCTTTCACTAATAATTATCCAATAATTCACACTCAACCTAATTATAATAATACTAACATAAGCCCTCAAAATTTCTTGAATGATGATTTTCAAAGGTTGCAACCACCTTCAAGTTTATTAAACCAATTACAGTACTTGTCATCTTCTTCTTCATCGTCTTCTTCTTCTTCTTCTCAACTGCCTTTTCTTCCAAGAATGTTTTTTCAGGGTTCCCAGACTACTAGTCAGAGTAGTGGAAGTGGTTTTCGGGCTACTTCACCGGATTCAACTTATGTTCCCCCTTCTTCTAGATAA
Protein Sequence:
- >62992|Micromonas_sp._RCC299|C2H2|62992
MDFRQNPGFAPGQAVFLPPGSWPGSGLPVAQFQSDGRGGMMGMTAGLQVAMGQNQSMMMAAPPQGPAVAQAPGGHAHHPKPKVTCTHPGCGKEFAWQQDLAKHVRRYHSGEEPRFACTHDGCDKKFYERKLLVAHERTHTDERPFACKHPGCGKAFRARNALAYHQKALHESGVVLRCTEDGCRFTTRKAEALATHKLRHQQRAAAKVWKQQKKGEVQAAVKTAKEELRTKSAELVNVQKQLAQEQKAHAKALKELNALKATHAKMKRKVTASATELESLRQQKRARTGGGKDAGAVGGKTKATGNGAGGGGGGGVGGERNAPALMPEIVLLDGPTGKMPMLAMDAPAALTAAASSARARESDAAAARQLVDGVVVPGAVAGFGYPGGVGTRVAPPPPLATTLNVNGTMRRLQPVCAQALPWSTSFIGCPGIKCDDGHDFTELFLEDGSRNAGNRRTTPLEVEHPKDVAAFHARSTNCPWAKPNLQVTLEKASDPMALHALLNEIAPKKALKVKRVDGQCAACYAAHVALAARLRAKHNAKPAGEPAADEVDAADEVDGLVEDALVDGDGDGDGDDDDAVAEETPRAVRSRRGV*